RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 IQSEC2Q5JU85 1478 aa18.54■□□□□ 0.56
SPG7-206ENST00000562775 RSPH6AQ9H0K4 717 aa18.54■□□□□ 0.56
SPG7-206ENST00000562775 PHRF1Q9P1Y6 1649 aaKnown RBP18.53■□□□□ 0.56
SPG7-206ENST00000562775 ZNF521Q96K83 1311 aa18.53■□□□□ 0.56
SPG7-206ENST00000562775 IP6K1Q92551 441 aa18.53■□□□□ 0.56
SPG7-206ENST00000562775 MED1Q15648 1581 aaPredicted RBP18.53■□□□□ 0.56
SPG7-206ENST00000562775 MAPK8IP3Q9UPT6 1336 aa18.52■□□□□ 0.56
SPG7-206ENST00000562775 ARHGEF25Q86VW2 580 aa18.52■□□□□ 0.56
SPG7-206ENST00000562775 RGPD1P0DJD0 1748 aa18.51■□□□□ 0.55
SPG7-206ENST00000562775 NEFMP07197 916 aa18.51■□□□□ 0.55
SPG7-206ENST00000562775 HMOX1P09601 288 aa18.51■□□□□ 0.55
SPG7-206ENST00000562775 PRKAR2BP31323 418 aa18.51■□□□□ 0.55
SPG7-206ENST00000562775 CCDC27Q2M243 656 aa18.49■□□□□ 0.55
SPG7-206ENST00000562775 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
SPG7-206ENST00000562775 ROBO1Q9Y6N7 1651 aa18.49■□□□□ 0.55
SPG7-206ENST00000562775 PLEKHG5O94827 1062 aa18.48■□□□□ 0.55
SPG7-206ENST00000562775 CRYBG1Q9Y4K1 1723 aa18.48■□□□□ 0.55
SPG7-206ENST00000562775 TMPOP42166 694 aaKnown RBP18.47■□□□□ 0.55
SPG7-206ENST00000562775 GOLGA2Q08379 1002 aa18.47■□□□□ 0.55
SPG7-206ENST00000562775 NEUROD2Q15784 382 aa18.47■□□□□ 0.55
SPG7-206ENST00000562775 SULT6B1Q6IMI4 303 aa18.47■□□□□ 0.55
SPG7-206ENST00000562775 WWC1Q8IX03 1113 aa18.47■□□□□ 0.55
SPG7-206ENST00000562775 CDCA7LQ96GN5 454 aa18.47■□□□□ 0.55
SPG7-206ENST00000562775 RRP7AQ9Y3A4 280 aaKnown RBP18.47■□□□□ 0.55
SPG7-206ENST00000562775 IGSF1Q8N6C5 1336 aa18.47■□□□□ 0.55
SPG7-206ENST00000562775 ZBTB7CA1YPR0 619 aa18.47■□□□□ 0.55
SPG7-206ENST00000562775 AHDC1Q5TGY3 1603 aaPredicted RBP18.46■□□□□ 0.55
SPG7-206ENST00000562775 TOM1O60784 492 aa18.46■□□□□ 0.55
SPG7-206ENST00000562775 CABLES1Q8TDN4 633 aa18.46■□□□□ 0.55
SPG7-206ENST00000562775 EYA1Q99502 592 aa18.46■□□□□ 0.55
SPG7-206ENST00000562775 KDRP35968 1356 aa18.45■□□□□ 0.54
SPG7-206ENST00000562775 ZC3H6P61129 1189 aaKnown RBP18.45■□□□□ 0.54
SPG7-206ENST00000562775 AEBP1Q8IUX7 1158 aa18.45■□□□□ 0.54
SPG7-206ENST00000562775 PHACTR3Q96KR7 559 aa18.44■□□□□ 0.54
SPG7-206ENST00000562775 WDR63Q8IWG1 891 aa18.43■□□□□ 0.54
SPG7-206ENST00000562775 LTV1Q96GA3 475 aaPredicted RBP18.43■□□□□ 0.54
SPG7-206ENST00000562775 CPDO75976 1380 aa18.43■□□□□ 0.54
SPG7-206ENST00000562775 RIPK4P57078 832 aa18.42■□□□□ 0.54
SPG7-206ENST00000562775 SLFN5Q08AF3 891 aa18.42■□□□□ 0.54
SPG7-206ENST00000562775 NFE2L2Q16236 605 aa18.42■□□□□ 0.54
SPG7-206ENST00000562775 LRRC59Q96AG4 307 aaKnown RBP18.42■□□□□ 0.54
SPG7-206ENST00000562775 ABCC6O95255 1503 aa18.42■□□□□ 0.54
SPG7-206ENST00000562775 E9PSI1 815 aa18.41■□□□□ 0.54
SPG7-206ENST00000562775 TRMT2AQ8IZ69 625 aaKnown RBP18.41■□□□□ 0.54
SPG7-206ENST00000562775 GTF3C3Q9Y5Q9 886 aa18.41■□□□□ 0.54
SPG7-206ENST00000562775 TRIM35Q9UPQ4 493 aa18.4■□□□□ 0.54
SPG7-206ENST00000562775 AXIN2Q9Y2T1 843 aa18.4■□□□□ 0.54
SPG7-206ENST00000562775 COL18A1P39060 1754 aa18.39■□□□□ 0.53
SPG7-206ENST00000562775 DUSP27Q5VZP5 1158 aa18.39■□□□□ 0.53
SPG7-206ENST00000562775 ANKRD24Q8TF21 1146 aa18.39■□□□□ 0.53
SPG7-206ENST00000562775 KIAA0232Q92628 1395 aa18.38■□□□□ 0.53
SPG7-206ENST00000562775 ABCA3Q99758 1704 aa18.38■□□□□ 0.53
SPG7-206ENST00000562775 HAP1P54257 671 aaPredicted RBP18.38■□□□□ 0.53
SPG7-206ENST00000562775 NBPF6Q5VWK0 638 aa18.38■□□□□ 0.53
SPG7-206ENST00000562775 NBPF4Q96M43 638 aa18.38■□□□□ 0.53
SPG7-206ENST00000562775 SPINK5Q9NQ38 1064 aaPredicted RBP18.38■□□□□ 0.53
SPG7-206ENST00000562775 SUPT16HQ9Y5B9 1047 aaKnown RBP18.38■□□□□ 0.53
SPG7-206ENST00000562775 RGPD5Q99666 1765 aa18.37■□□□□ 0.53
SPG7-206ENST00000562775 ERBB3P21860 1342 aa18.37■□□□□ 0.53
SPG7-206ENST00000562775 LMOD3Q0VAK6 560 aa18.37■□□□□ 0.53
SPG7-206ENST00000562775 IL16Q14005 1332 aa18.36■□□□□ 0.53
SPG7-206ENST00000562775 UBAP1LF5GYI3 381 aa18.36■□□□□ 0.53
SPG7-206ENST00000562775 NCAPD2Q15021 1401 aa18.35■□□□□ 0.53
SPG7-206ENST00000562775 PIP4K2BP78356 416 aa18.35■□□□□ 0.53
SPG7-206ENST00000562775 CHRNA2Q15822 529 aa18.35■□□□□ 0.53
SPG7-206ENST00000562775 PHLPP1O60346 1717 aa18.35■□□□□ 0.53
SPG7-206ENST00000562775 CERKQ8TCT0 537 aa18.34■□□□□ 0.53
SPG7-206ENST00000562775 PRDM11Q9NQV5 511 aa18.34■□□□□ 0.53
SPG7-206ENST00000562775 COL22A1Q8NFW1 1626 aaPredicted RBP18.34■□□□□ 0.53
SPG7-206ENST00000562775 DLG5Q8TDM6 1919 aa18.34■□□□□ 0.53
SPG7-206ENST00000562775 RGPD2P0DJD1 1756 aa18.34■□□□□ 0.53
SPG7-206ENST00000562775 CAMTA1Q9Y6Y1 1673 aa18.34■□□□□ 0.53
SPG7-206ENST00000562775 COL16A1Q07092 1604 aaPredicted RBP18.34■□□□□ 0.53
SPG7-206ENST00000562775 USHBP1Q8N6Y0 703 aa18.34■□□□□ 0.53
SPG7-206ENST00000562775 CALD1Q05682 793 aaKnown RBP18.33■□□□□ 0.52
SPG7-206ENST00000562775 GAS2L2Q8NHY3 880 aa18.33■□□□□ 0.52
SPG7-206ENST00000562775 MYH16Q9H6N6 1097 aa18.33■□□□□ 0.52
SPG7-206ENST00000562775 RCAN3Q9UKA8 241 aa18.33■□□□□ 0.52
SPG7-206ENST00000562775 NEFLP07196 543 aa18.32■□□□□ 0.52
SPG7-206ENST00000562775 MTHFSDQ2M296 383 aaKnown RBP18.32■□□□□ 0.52
SPG7-206ENST00000562775 LMO7Q8WWI1 1683 aa18.31■□□□□ 0.52
SPG7-206ENST00000562775 FAM208AQ9UK61 1670 aaKnown RBP18.31■□□□□ 0.52
SPG7-206ENST00000562775 RNF123Q5XPI4 1314 aa18.3■□□□□ 0.52
SPG7-206ENST00000562775 CSB-PGBD3P0DP91 1061 aa18.29■□□□□ 0.52
SPG7-206ENST00000562775 NLRP2Q9NX02 1062 aa18.29■□□□□ 0.52
SPG7-206ENST00000562775 HTATSF1O43719 755 aaKnown RBP18.27■□□□□ 0.52
SPG7-206ENST00000562775 THUMPD2Q9BTF0 503 aaKnown RBP18.27■□□□□ 0.52
SPG7-206ENST00000562775 FAM83GA6ND36 823 aa18.26■□□□□ 0.51
SPG7-206ENST00000562775 WDR17Q8IZU2 1322 aa18.26■□□□□ 0.51
SPG7-206ENST00000562775 FANCIQ9NVI1 1328 aa18.26■□□□□ 0.51
SPG7-206ENST00000562775 COL5A2P05997 1499 aaPredicted RBP18.26■□□□□ 0.51
SPG7-206ENST00000562775 GNAI1P63096 354 aa18.25■□□□□ 0.51
SPG7-206ENST00000562775 AMOTQ4VCS5 1084 aa18.25■□□□□ 0.51
SPG7-206ENST00000562775 PLEKHO1Q53GL0 409 aaPredicted RBP18.25■□□□□ 0.51
SPG7-206ENST00000562775 RTF1Q92541 710 aaKnown RBP18.25■□□□□ 0.51
SPG7-206ENST00000562775 IFT57Q9NWB7 429 aa18.25■□□□□ 0.51
SPG7-206ENST00000562775 DCTN1Q14203 1278 aa18.25■□□□□ 0.51
SPG7-206ENST00000562775 FKBP8Q14318 412 aa18.25■□□□□ 0.51
SPG7-206ENST00000562775 PLEKHG2Q9H7P9 1386 aa18.24■□□□□ 0.51
SPG7-206ENST00000562775 GNAT3A8MTJ3 354 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms