RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 KCNH5Q8NCM2 988 aa15.59■□□□□ 0.09
LPCAT4-202ENST00000562404 TERF2IPQ9NYB0 399 aa15.59■□□□□ 0.09
LPCAT4-202ENST00000562404 BLMP54132 1417 aaPredicted RBP15.59■□□□□ 0.09
LPCAT4-202ENST00000562404 TNS1Q9HBL0 1735 aaKnown RBP15.58■□□□□ 0.08
LPCAT4-202ENST00000562404 TMF1P82094 1093 aa15.58■□□□□ 0.08
LPCAT4-202ENST00000562404 BARGINQ6ZT62 677 aa15.58■□□□□ 0.08
LPCAT4-202ENST00000562404 DEFB132Q7Z7B7 95 aa15.58■□□□□ 0.08
LPCAT4-202ENST00000562404 NINLQ9Y2I6 1382 aa15.58■□□□□ 0.08
LPCAT4-202ENST00000562404 CRB1P82279 1406 aa15.58■□□□□ 0.08
LPCAT4-202ENST00000562404 TCP11L2Q8N4U5 519 aa15.57■□□□□ 0.08
LPCAT4-202ENST00000562404 CCDC125Q86Z20 511 aa15.56■□□□□ 0.08
LPCAT4-202ENST00000562404 ANKRD36BQ8N2N9 1353 aa15.56■□□□□ 0.08
LPCAT4-202ENST00000562404 LRRC37A3O60309 1634 aa15.56■□□□□ 0.08
LPCAT4-202ENST00000562404 RGPD1P0DJD0 1748 aa15.56■□□□□ 0.08
LPCAT4-202ENST00000562404 WDR17Q8IZU2 1322 aa15.55■□□□□ 0.08
LPCAT4-202ENST00000562404 SLC24A1O60721 1099 aa15.55■□□□□ 0.08
LPCAT4-202ENST00000562404 FBLN1P23142 703 aa15.55■□□□□ 0.08
LPCAT4-202ENST00000562404 KIF20BQ96Q89 1820 aa15.54■□□□□ 0.08
LPCAT4-202ENST00000562404 ABCC6O95255 1503 aa15.54■□□□□ 0.08
LPCAT4-202ENST00000562404 PEAK1Q9H792 1746 aa15.54■□□□□ 0.08
LPCAT4-202ENST00000562404 TOM1L2Q6ZVM7 507 aa15.53■□□□□ 0.08
LPCAT4-202ENST00000562404 THRAP3Q9Y2W1 955 aaKnown RBP15.53■□□□□ 0.08
LPCAT4-202ENST00000562404 SBF2Q86WG5 1849 aa15.52■□□□□ 0.08
LPCAT4-202ENST00000562404 RGPD2P0DJD1 1756 aa15.52■□□□□ 0.08
LPCAT4-202ENST00000562404 HSPA5P11021 654 aaKnown RBP15.51■□□□□ 0.07
LPCAT4-202ENST00000562404 CARD14Q9BXL6 1004 aa15.51■□□□□ 0.07
LPCAT4-202ENST00000562404 DISP2A7MBM2 1401 aa15.51■□□□□ 0.07
LPCAT4-202ENST00000562404 FYB1O15117 783 aa15.5■□□□□ 0.07
LPCAT4-202ENST00000562404 ERBB3P21860 1342 aa15.49■□□□□ 0.07
LPCAT4-202ENST00000562404 CARD10Q9BWT7 1032 aa15.49■□□□□ 0.07
LPCAT4-202ENST00000562404 GGNBP2Q9H3C7 697 aa15.49■□□□□ 0.07
LPCAT4-202ENST00000562404 TRIM37O94972 964 aa15.48■□□□□ 0.07
LPCAT4-202ENST00000562404 CSB-PGBD3P0DP91 1061 aa15.48■□□□□ 0.07
LPCAT4-202ENST00000562404 PDE3BQ13370 1112 aa15.48■□□□□ 0.07
LPCAT4-202ENST00000562404 SF3B2Q13435 895 aaKnown RBP15.48■□□□□ 0.07
LPCAT4-202ENST00000562404 COG3Q96JB2 828 aa15.48■□□□□ 0.07
LPCAT4-202ENST00000562404 MAP3K19Q56UN5 1328 aa15.47■□□□□ 0.07
LPCAT4-202ENST00000562404 C11orf95C9JLR9 678 aaPredicted RBP15.47■□□□□ 0.07
LPCAT4-202ENST00000562404 EIF4G2P78344 907 aaKnown RBP eCLIP15.47■□□□□ 0.07
LPCAT4-202ENST00000562404 EN1Q05925 392 aaPredicted RBP15.47■□□□□ 0.07
LPCAT4-202ENST00000562404 CDCA8Q53HL2 280 aa15.47■□□□□ 0.07
LPCAT4-202ENST00000562404 FAM196AQ6ZSG2 479 aa15.47■□□□□ 0.07
LPCAT4-202ENST00000562404 NSD3Q9BZ95 1437 aa15.47■□□□□ 0.07
LPCAT4-202ENST00000562404 ANKRD24Q8TF21 1146 aa15.46■□□□□ 0.07
LPCAT4-202ENST00000562404 IP6K1Q92551 441 aa15.46■□□□□ 0.07
LPCAT4-202ENST00000562404 FAM208AQ9UK61 1670 aaKnown RBP15.45■□□□□ 0.06
LPCAT4-202ENST00000562404 BAG6P46379 1132 aa15.45■□□□□ 0.06
LPCAT4-202ENST00000562404 RRS1Q15050 365 aaKnown RBP15.45■□□□□ 0.06
LPCAT4-202ENST00000562404 DDB1Q16531 1140 aa15.45■□□□□ 0.06
LPCAT4-202ENST00000562404 MARCH10Q8NA82 808 aaPredicted RBP15.45■□□□□ 0.06
LPCAT4-202ENST00000562404 POLR3GLQ9BT43 218 aa15.45■□□□□ 0.06
LPCAT4-202ENST00000562404 HOXC9P31274 260 aa15.44■□□□□ 0.06
LPCAT4-202ENST00000562404 EZH2Q15910 746 aaKnown RBP15.44■□□□□ 0.06
LPCAT4-202ENST00000562404 PTF1AQ7RTS3 328 aa15.44■□□□□ 0.06
LPCAT4-202ENST00000562404 CCDC7Q96M83 1385 aa15.44■□□□□ 0.06
LPCAT4-202ENST00000562404 SRCAPQ6ZRS2 3230 aa15.44■□□□□ 0.06
LPCAT4-202ENST00000562404 RREB1Q92766 1687 aa15.44■□□□□ 0.06
LPCAT4-202ENST00000562404 MAP2P11137 1827 aaKnown RBP15.43■□□□□ 0.06
LPCAT4-202ENST00000562404 LTV1Q96GA3 475 aaPredicted RBP15.43■□□□□ 0.06
LPCAT4-202ENST00000562404 NLRP2Q9NX02 1062 aa15.43■□□□□ 0.06
LPCAT4-202ENST00000562404 OVOS2A0A0G2JMS6 1433 aa15.43■□□□□ 0.06
LPCAT4-202ENST00000562404 CAMKK2Q96RR4 588 aa15.42■□□□□ 0.06
LPCAT4-202ENST00000562404 NUP188Q5SRE5 1749 aa15.42■□□□□ 0.06
LPCAT4-202ENST00000562404 ANKRD26Q9UPS8 1709 aa15.42■□□□□ 0.06
LPCAT4-202ENST00000562404 SHANK3Q9BYB0 1731 aa15.41■□□□□ 0.06
LPCAT4-202ENST00000562404 APBA3O96018 575 aa15.41■□□□□ 0.06
LPCAT4-202ENST00000562404 TNS2Q63HR2 1409 aa15.41■□□□□ 0.06
LPCAT4-202ENST00000562404 AMPHP49418 695 aa15.4■□□□□ 0.06
LPCAT4-202ENST00000562404 CDCA7Q9BWT1 371 aaPredicted RBP15.4■□□□□ 0.06
LPCAT4-202ENST00000562404 KAT6BQ8WYB5 2073 aa15.39■□□□□ 0.05
LPCAT4-202ENST00000562404 EXOC5O00471 708 aa15.38■□□□□ 0.05
LPCAT4-202ENST00000562404 IL2RBP14784 551 aa15.38■□□□□ 0.05
LPCAT4-202ENST00000562404 EMILIN1Q9Y6C2 1016 aa15.38■□□□□ 0.05
LPCAT4-202ENST00000562404 RTL1A6NKG5 1358 aa15.37■□□□□ 0.05
LPCAT4-202ENST00000562404 BCL9O00512 1426 aa15.37■□□□□ 0.05
LPCAT4-202ENST00000562404 PSDA5PKW4 1024 aaPredicted RBP15.37■□□□□ 0.05
LPCAT4-202ENST00000562404 HSP90AB2PQ58FF8 381 aa15.37■□□□□ 0.05
LPCAT4-202ENST00000562404 RGPD3A6NKT7 1758 aaPredicted RBP15.36■□□□□ 0.05
LPCAT4-202ENST00000562404 RGPD4Q7Z3J3 1758 aa15.36■□□□□ 0.05
LPCAT4-202ENST00000562404 NHSQ6T4R5 1651 aa15.36■□□□□ 0.05
LPCAT4-202ENST00000562404 NBPF6Q5VWK0 638 aa15.36■□□□□ 0.05
LPCAT4-202ENST00000562404 NBPF4Q96M43 638 aa15.36■□□□□ 0.05
LPCAT4-202ENST00000562404 PANK3Q9H999 370 aa15.36■□□□□ 0.05
LPCAT4-202ENST00000562404 MEGF6O75095 1541 aa15.36■□□□□ 0.05
LPCAT4-202ENST00000562404 KCNQ2O43526 872 aa15.35■□□□□ 0.05
LPCAT4-202ENST00000562404 USHBP1Q8N6Y0 703 aa15.35■□□□□ 0.05
LPCAT4-202ENST00000562404 BTAF1O14981 1849 aa15.34■□□□□ 0.05
LPCAT4-202ENST00000562404 CGNL1Q0VF96 1302 aa15.34■□□□□ 0.05
LPCAT4-202ENST00000562404 KIF7Q2M1P5 1343 aa15.34■□□□□ 0.05
LPCAT4-202ENST00000562404 INSRP06213 1382 aa15.34■□□□□ 0.05
LPCAT4-202ENST00000562404 FLT4P35916 1363 aa15.34■□□□□ 0.05
LPCAT4-202ENST00000562404 ACSBG1Q96GR2 724 aa15.33■□□□□ 0.04
LPCAT4-202ENST00000562404 BCL11BQ9C0K0 894 aaPredicted RBP15.33■□□□□ 0.04
LPCAT4-202ENST00000562404 PARD3Q8TEW0 1356 aa15.33■□□□□ 0.04
LPCAT4-202ENST00000562404 R3HDM1Q15032 1099 aaKnown RBP15.32■□□□□ 0.04
LPCAT4-202ENST00000562404 PROM2Q8N271 834 aa15.32■□□□□ 0.04
LPCAT4-202ENST00000562404 DOT1LQ8TEK3 1739 aa15.31■□□□□ 0.04
LPCAT4-202ENST00000562404 POLKQ9UBT6 870 aa15.31■□□□□ 0.04
LPCAT4-202ENST00000562404 KIF24Q5T7B8 1368 aa15.31■□□□□ 0.04
LPCAT4-202ENST00000562404 PLSCR1O15162 318 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms