RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 APAF1O14727 1248 aa18.85■□□□□ 0.61
COMMD4-205ENST00000562310 ROBO1Q9Y6N7 1651 aa18.85■□□□□ 0.61
COMMD4-205ENST00000562310 SOS2Q07890 1332 aaPredicted RBP18.84■□□□□ 0.61
COMMD4-205ENST00000562310 AHDC1Q5TGY3 1603 aaPredicted RBP18.84■□□□□ 0.61
COMMD4-205ENST00000562310 NEFMP07197 916 aa18.83■□□□□ 0.6
COMMD4-205ENST00000562310 EIF4A2Q14240 407 aaKnown RBP18.83■□□□□ 0.6
COMMD4-205ENST00000562310 LMOD2Q6P5Q4 547 aa18.83■□□□□ 0.6
COMMD4-205ENST00000562310 ZNF521Q96K83 1311 aa18.82■□□□□ 0.6
COMMD4-205ENST00000562310 HOXC9P31274 260 aa18.82■□□□□ 0.6
COMMD4-205ENST00000562310 PLEKHF1Q96S99 279 aa18.82■□□□□ 0.6
COMMD4-205ENST00000562310 RSPH6AQ9H0K4 717 aa18.82■□□□□ 0.6
COMMD4-205ENST00000562310 ABCA3Q99758 1704 aa18.82■□□□□ 0.6
COMMD4-205ENST00000562310 GCP02774 474 aa18.81■□□□□ 0.6
COMMD4-205ENST00000562310 CCDC27Q2M243 656 aa18.81■□□□□ 0.6
COMMD4-205ENST00000562310 HSP90AB2PQ58FF8 381 aa18.81■□□□□ 0.6
COMMD4-205ENST00000562310 TCP11L2Q8N4U5 519 aa18.81■□□□□ 0.6
COMMD4-205ENST00000562310 IP6K1Q92551 441 aa18.8■□□□□ 0.6
COMMD4-205ENST00000562310 DDX17Q92841 729 aaKnown RBP18.8■□□□□ 0.6
COMMD4-205ENST00000562310 SALL2Q9Y467 1007 aaPredicted RBP18.8■□□□□ 0.6
COMMD4-205ENST00000562310 PRKAR2BP31323 418 aa18.78■□□□□ 0.6
COMMD4-205ENST00000562310 ARHGEF25Q86VW2 580 aa18.78■□□□□ 0.6
COMMD4-205ENST00000562310 FAM208AQ9UK61 1670 aaKnown RBP18.78■□□□□ 0.6
COMMD4-205ENST00000562310 CAMTA1Q9Y6Y1 1673 aa18.77■□□□□ 0.6
COMMD4-205ENST00000562310 SENP3-EIF4A1A0A087X0R7 540 aa18.77■□□□□ 0.6
COMMD4-205ENST00000562310 GOLGA2Q08379 1002 aa18.77■□□□□ 0.6
COMMD4-205ENST00000562310 PHF23Q9BUL5 403 aaPredicted RBP18.77■□□□□ 0.6
COMMD4-205ENST00000562310 KDRP35968 1356 aa18.77■□□□□ 0.6
COMMD4-205ENST00000562310 IGSF1Q8N6C5 1336 aa18.76■□□□□ 0.59
COMMD4-205ENST00000562310 CPDO75976 1380 aa18.76■□□□□ 0.59
COMMD4-205ENST00000562310 HMOX1P09601 288 aa18.75■□□□□ 0.59
COMMD4-205ENST00000562310 COL18A1P39060 1754 aa18.75■□□□□ 0.59
COMMD4-205ENST00000562310 COL22A1Q8NFW1 1626 aaPredicted RBP18.74■□□□□ 0.59
COMMD4-205ENST00000562310 DLG5Q8TDM6 1919 aa18.74■□□□□ 0.59
COMMD4-205ENST00000562310 TMPOP42166 694 aaKnown RBP18.74■□□□□ 0.59
COMMD4-205ENST00000562310 WWC1Q8IX03 1113 aa18.74■□□□□ 0.59
COMMD4-205ENST00000562310 RGPD5Q99666 1765 aa18.73■□□□□ 0.59
COMMD4-205ENST00000562310 E9PSI1 815 aa18.73■□□□□ 0.59
COMMD4-205ENST00000562310 SULT6B1Q6IMI4 303 aa18.73■□□□□ 0.59
COMMD4-205ENST00000562310 WDR63Q8IWG1 891 aa18.73■□□□□ 0.59
COMMD4-205ENST00000562310 PHLPP1O60346 1717 aa18.73■□□□□ 0.59
COMMD4-205ENST00000562310 NFE2L2Q16236 605 aa18.72■□□□□ 0.59
COMMD4-205ENST00000562310 RRP7AQ9Y3A4 280 aaKnown RBP18.72■□□□□ 0.59
COMMD4-205ENST00000562310 LMO7Q8WWI1 1683 aa18.71■□□□□ 0.59
COMMD4-205ENST00000562310 TOM1O60784 492 aa18.71■□□□□ 0.59
COMMD4-205ENST00000562310 LMOD3Q0VAK6 560 aa18.71■□□□□ 0.59
COMMD4-205ENST00000562310 EYA1Q99502 592 aa18.71■□□□□ 0.59
COMMD4-205ENST00000562310 NCAPD2Q15021 1401 aa18.71■□□□□ 0.59
COMMD4-205ENST00000562310 RGPD2P0DJD1 1756 aa18.7■□□□□ 0.58
COMMD4-205ENST00000562310 ZBTB7CA1YPR0 619 aa18.7■□□□□ 0.58
COMMD4-205ENST00000562310 SLFN5Q08AF3 891 aa18.7■□□□□ 0.58
COMMD4-205ENST00000562310 NEUROD2Q15784 382 aa18.7■□□□□ 0.58
COMMD4-205ENST00000562310 CDCA7LQ96GN5 454 aa18.7■□□□□ 0.58
COMMD4-205ENST00000562310 COL16A1Q07092 1604 aaPredicted RBP18.7■□□□□ 0.58
COMMD4-205ENST00000562310 AEBP1Q8IUX7 1158 aa18.69■□□□□ 0.58
COMMD4-205ENST00000562310 IL16Q14005 1332 aa18.69■□□□□ 0.58
COMMD4-205ENST00000562310 NEFLP07196 543 aa18.68■□□□□ 0.58
COMMD4-205ENST00000562310 RIPK4P57078 832 aa18.68■□□□□ 0.58
COMMD4-205ENST00000562310 TRMT2AQ8IZ69 625 aaKnown RBP18.68■□□□□ 0.58
COMMD4-205ENST00000562310 LRRC59Q96AG4 307 aaKnown RBP18.68■□□□□ 0.58
COMMD4-205ENST00000562310 GTF3C3Q9Y5Q9 886 aa18.68■□□□□ 0.58
COMMD4-205ENST00000562310 CALD1Q05682 793 aaKnown RBP18.67■□□□□ 0.58
COMMD4-205ENST00000562310 DUSP27Q5VZP5 1158 aa18.67■□□□□ 0.58
COMMD4-205ENST00000562310 LTV1Q96GA3 475 aaPredicted RBP18.67■□□□□ 0.58
COMMD4-205ENST00000562310 PHACTR3Q96KR7 559 aa18.67■□□□□ 0.58
COMMD4-205ENST00000562310 KIAA0232Q92628 1395 aa18.67■□□□□ 0.58
COMMD4-205ENST00000562310 PLEKHG5O94827 1062 aa18.66■□□□□ 0.58
COMMD4-205ENST00000562310 ZC3H6P61129 1189 aaKnown RBP18.66■□□□□ 0.58
COMMD4-205ENST00000562310 ANKRD24Q8TF21 1146 aa18.66■□□□□ 0.58
COMMD4-205ENST00000562310 MYH16Q9H6N6 1097 aa18.66■□□□□ 0.58
COMMD4-205ENST00000562310 TRIM35Q9UPQ4 493 aa18.66■□□□□ 0.58
COMMD4-205ENST00000562310 PLEKHG2Q9H7P9 1386 aa18.66■□□□□ 0.58
COMMD4-205ENST00000562310 HAP1P54257 671 aaPredicted RBP18.65■□□□□ 0.58
COMMD4-205ENST00000562310 CABLES1Q8TDN4 633 aa18.65■□□□□ 0.58
COMMD4-205ENST00000562310 ERBB3P21860 1342 aa18.65■□□□□ 0.58
COMMD4-205ENST00000562310 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
COMMD4-205ENST00000562310 SUPT16HQ9Y5B9 1047 aaKnown RBP18.64■□□□□ 0.57
COMMD4-205ENST00000562310 RCAN3Q9UKA8 241 aa18.63■□□□□ 0.57
COMMD4-205ENST00000562310 COL14A1Q05707 1796 aaKnown RBP18.63■□□□□ 0.57
COMMD4-205ENST00000562310 PRDM11Q9NQV5 511 aa18.62■□□□□ 0.57
COMMD4-205ENST00000562310 LRRC37A3O60309 1634 aa18.61■□□□□ 0.57
COMMD4-205ENST00000562310 RNF123Q5XPI4 1314 aa18.61■□□□□ 0.57
COMMD4-205ENST00000562310 NBPF6Q5VWK0 638 aa18.61■□□□□ 0.57
COMMD4-205ENST00000562310 NBPF4Q96M43 638 aa18.61■□□□□ 0.57
COMMD4-205ENST00000562310 AXIN2Q9Y2T1 843 aa18.61■□□□□ 0.57
COMMD4-205ENST00000562310 UBAP1LF5GYI3 381 aa18.6■□□□□ 0.57
COMMD4-205ENST00000562310 SPINK5Q9NQ38 1064 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-205ENST00000562310 HTATSF1O43719 755 aaKnown RBP18.58■□□□□ 0.56
COMMD4-205ENST00000562310 COL5A2P05997 1499 aaPredicted RBP18.58■□□□□ 0.56
COMMD4-205ENST00000562310 PARP4Q9UKK3 1724 aaKnown RBP18.57■□□□□ 0.56
COMMD4-205ENST00000562310 CT47B1P0C2W7 299 aaPredicted RBP18.57■□□□□ 0.56
COMMD4-205ENST00000562310 CHRNA2Q15822 529 aa18.57■□□□□ 0.56
COMMD4-205ENST00000562310 USHBP1Q8N6Y0 703 aa18.57■□□□□ 0.56
COMMD4-205ENST00000562310 IFT57Q9NWB7 429 aa18.57■□□□□ 0.56
COMMD4-205ENST00000562310 MAP3K5Q99683 1374 aa18.56■□□□□ 0.56
COMMD4-205ENST00000562310 FANCIQ9NVI1 1328 aa18.56■□□□□ 0.56
COMMD4-205ENST00000562310 CSB-PGBD3P0DP91 1061 aa18.56■□□□□ 0.56
COMMD4-205ENST00000562310 GNAI1P63096 354 aa18.56■□□□□ 0.56
COMMD4-205ENST00000562310 MTHFSDQ2M296 383 aaKnown RBP18.56■□□□□ 0.56
COMMD4-205ENST00000562310 AMOTQ4VCS5 1084 aa18.56■□□□□ 0.56
COMMD4-205ENST00000562310 PKD1L3Q7Z443 1732 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms