RNA–Protein interactions for RNA: ENST00000562261.1

KLHDC4-208, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-208ENST00000562261 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.46■■□□□ 1.03
KLHDC4-208ENST00000562261 PUS7Q96PZ0 661 aaKnown RBP21.46■■□□□ 1.03
KLHDC4-208ENST00000562261 SLC12A5Q9H2X9 1139 aa21.46■■□□□ 1.03
KLHDC4-208ENST00000562261 RGPD5Q99666 1765 aa21.46■■□□□ 1.03
KLHDC4-208ENST00000562261 TRIM37O94972 964 aa21.45■■□□□ 1.02
KLHDC4-208ENST00000562261 TOM1L2Q6ZVM7 507 aa21.45■■□□□ 1.02
KLHDC4-208ENST00000562261 HDGFL2Q7Z4V5 671 aaPredicted RBP21.45■■□□□ 1.02
KLHDC4-208ENST00000562261 WDR17Q8IZU2 1322 aa21.45■■□□□ 1.02
KLHDC4-208ENST00000562261 USP31Q70CQ4 1352 aa21.45■■□□□ 1.02
KLHDC4-208ENST00000562261 ST20-MTHFSA0A0A6YYL1 179 aa21.44■■□□□ 1.02
KLHDC4-208ENST00000562261 TESK2Q96S53 571 aa21.44■■□□□ 1.02
KLHDC4-208ENST00000562261 WNK3Q9BYP7 1800 aa21.43■■□□□ 1.02
KLHDC4-208ENST00000562261 EDC4Q6P2E9 1401 aaKnown RBP21.43■■□□□ 1.02
KLHDC4-208ENST00000562261 ABCC6O95255 1503 aa21.43■■□□□ 1.02
KLHDC4-208ENST00000562261 LRRC37A3O60309 1634 aa21.43■■□□□ 1.02
KLHDC4-208ENST00000562261 A0A1W2PP64 1363 aa21.42■■□□□ 1.02
KLHDC4-208ENST00000562261 NME9Q86XW9 330 aa21.42■■□□□ 1.02
KLHDC4-208ENST00000562261 TERF2IPQ9NYB0 399 aa21.42■■□□□ 1.02
KLHDC4-208ENST00000562261 NINLQ9Y2I6 1382 aa21.4■■□□□ 1.02
KLHDC4-208ENST00000562261 SLC24A1O60721 1099 aa21.4■■□□□ 1.02
KLHDC4-208ENST00000562261 APBA3O96018 575 aa21.39■■□□□ 1.01
KLHDC4-208ENST00000562261 CSB-PGBD3P0DP91 1061 aa21.39■■□□□ 1.01
KLHDC4-208ENST00000562261 EZH2Q15910 746 aaKnown RBP21.39■■□□□ 1.01
KLHDC4-208ENST00000562261 PEAK1Q9H792 1746 aa21.38■■□□□ 1.01
KLHDC4-208ENST00000562261 CAMKK2Q96RR4 588 aa21.38■■□□□ 1.01
KLHDC4-208ENST00000562261 LTN1O94822 1766 aa21.38■■□□□ 1.01
KLHDC4-208ENST00000562261 OVOS2A0A0G2JMS6 1433 aa21.38■■□□□ 1.01
KLHDC4-208ENST00000562261 OVOS2A0A0J9YW53 1432 aa21.38■■□□□ 1.01
KLHDC4-208ENST00000562261 OVOS2Q6IE36 1432 aa21.38■■□□□ 1.01
KLHDC4-208ENST00000562261 C11orf95C9JLR9 678 aaPredicted RBP21.37■■□□□ 1.01
KLHDC4-208ENST00000562261 DDB1Q16531 1140 aa21.37■■□□□ 1.01
KLHDC4-208ENST00000562261 CARD10Q9BWT7 1032 aa21.37■■□□□ 1.01
KLHDC4-208ENST00000562261 PARD3Q8TEW0 1356 aa21.36■■□□□ 1.01
KLHDC4-208ENST00000562261 USP47Q96K76 1375 aa21.36■■□□□ 1.01
KLHDC4-208ENST00000562261 CDCA7Q9BWT1 371 aaPredicted RBP21.36■■□□□ 1.01
KLHDC4-208ENST00000562261 RREB1Q92766 1687 aa21.34■■□□□ 1.01
KLHDC4-208ENST00000562261 CCDC7Q96M83 1385 aa21.34■■□□□ 1.01
KLHDC4-208ENST00000562261 SBF2Q86WG5 1849 aa21.33■■□□□ 1.01
KLHDC4-208ENST00000562261 ERBB3P21860 1342 aa21.32■■□□□ 1
KLHDC4-208ENST00000562261 TMF1P82094 1093 aa21.31■■□□□ 1
KLHDC4-208ENST00000562261 NUP188Q5SRE5 1749 aa21.31■■□□□ 1
KLHDC4-208ENST00000562261 ANKRD36BQ8N2N9 1353 aa21.31■■□□□ 1
KLHDC4-208ENST00000562261 CLSPNQ9HAW4 1339 aa21.3■■□□□ 1
KLHDC4-208ENST00000562261 TIMELESSQ9UNS1 1208 aa21.3■■□□□ 1
KLHDC4-208ENST00000562261 MARCH10Q8NA82 808 aaPredicted RBP21.29■■□□□ 1
KLHDC4-208ENST00000562261 PCGF6Q9BYE7 350 aa21.29■■□□□ 1
KLHDC4-208ENST00000562261 BCL9O00512 1426 aa21.29■■□□□ 1
KLHDC4-208ENST00000562261 RGPD3A6NKT7 1758 aaPredicted RBP21.28■■□□□ 1
KLHDC4-208ENST00000562261 RGPD4Q7Z3J3 1758 aa21.28■■□□□ 1
KLHDC4-208ENST00000562261 EXOC5O00471 708 aa21.27■■□□□ 1
KLHDC4-208ENST00000562261 COG3Q96JB2 828 aa21.27■■□□□ 1
KLHDC4-208ENST00000562261 NLRP2Q9NX02 1062 aa21.27■■□□□ 1
KLHDC4-208ENST00000562261 TNS2Q63HR2 1409 aa21.27■■□□□ 1
KLHDC4-208ENST00000562261 DCAF8L1A6NGE4 600 aa21.26■□□□□ 0.99
KLHDC4-208ENST00000562261 ANKRD24Q8TF21 1146 aa21.26■□□□□ 0.99
KLHDC4-208ENST00000562261 PPP1R1BQ9UD71 204 aaPredicted RBP21.26■□□□□ 0.99
KLHDC4-208ENST00000562261 BCL11BQ9C0K0 894 aaPredicted RBP21.25■□□□□ 0.99
KLHDC4-208ENST00000562261 CDCA8Q53HL2 280 aa21.24■□□□□ 0.99
KLHDC4-208ENST00000562261 IP6K1Q92551 441 aa21.24■□□□□ 0.99
KLHDC4-208ENST00000562261 NBPF14Q5TI25 921 aa21.23■□□□□ 0.99
KLHDC4-208ENST00000562261 PTF1AQ7RTS3 328 aa21.23■□□□□ 0.99
KLHDC4-208ENST00000562261 FAM208AQ9UK61 1670 aaKnown RBP21.23■□□□□ 0.99
KLHDC4-208ENST00000562261 PLSCR1O15162 318 aa21.22■□□□□ 0.99
KLHDC4-208ENST00000562261 IL2RBP14784 551 aa21.22■□□□□ 0.99
KLHDC4-208ENST00000562261 MAP3K19Q56UN5 1328 aa21.21■□□□□ 0.99
KLHDC4-208ENST00000562261 MYOM1P52179 1685 aa21.2■□□□□ 0.98
KLHDC4-208ENST00000562261 FYB1O15117 783 aa21.19■□□□□ 0.98
KLHDC4-208ENST00000562261 FBLN1P23142 703 aa21.19■□□□□ 0.98
KLHDC4-208ENST00000562261 HOXC9P31274 260 aa21.19■□□□□ 0.98
KLHDC4-208ENST00000562261 SPON1Q9HCB6 807 aa21.19■□□□□ 0.98
KLHDC4-208ENST00000562261 KIF20BQ96Q89 1820 aa21.18■□□□□ 0.98
KLHDC4-208ENST00000562261 AMPHP49418 695 aa21.18■□□□□ 0.98
KLHDC4-208ENST00000562261 LTV1Q96GA3 475 aaPredicted RBP21.18■□□□□ 0.98
KLHDC4-208ENST00000562261 NHSQ6T4R5 1651 aa21.18■□□□□ 0.98
KLHDC4-208ENST00000562261 GGNBP2Q9H3C7 697 aa21.17■□□□□ 0.98
KLHDC4-208ENST00000562261 RTL1A6NKG5 1358 aa21.16■□□□□ 0.98
KLHDC4-208ENST00000562261 KCNQ2O43526 872 aa21.16■□□□□ 0.98
KLHDC4-208ENST00000562261 RRS1Q15050 365 aaKnown RBP21.14■□□□□ 0.97
KLHDC4-208ENST00000562261 PROM2Q8N271 834 aa21.14■□□□□ 0.97
KLHDC4-208ENST00000562261 RGPD2P0DJD1 1756 aa21.14■□□□□ 0.97
KLHDC4-208ENST00000562261 ACSBG1Q96GR2 724 aa21.13■□□□□ 0.97
KLHDC4-208ENST00000562261 CARD14Q9BXL6 1004 aa21.12■□□□□ 0.97
KLHDC4-208ENST00000562261 ANO8Q9HCE9 1232 aaPredicted RBP21.12■□□□□ 0.97
KLHDC4-208ENST00000562261 NSD3Q9BZ95 1437 aa21.12■□□□□ 0.97
KLHDC4-208ENST00000562261 TXNRD1Q16881 649 aa21.1■□□□□ 0.97
KLHDC4-208ENST00000562261 CCER1Q8TC90 406 aaPredicted RBP21.1■□□□□ 0.97
KLHDC4-208ENST00000562261 BTAF1O14981 1849 aa21.09■□□□□ 0.97
KLHDC4-208ENST00000562261 SMG6Q86US8 1419 aaKnown RBP21.08■□□□□ 0.97
KLHDC4-208ENST00000562261 ZNF784Q8NCA9 323 aaPredicted RBP21.08■□□□□ 0.97
KLHDC4-208ENST00000562261 DDX54Q8TDD1 881 aaKnown RBP21.08■□□□□ 0.97
KLHDC4-208ENST00000562261 CASZ1Q86V15 1759 aa21.08■□□□□ 0.96
KLHDC4-208ENST00000562261 SHANK3Q9BYB0 1731 aa21.07■□□□□ 0.96
KLHDC4-208ENST00000562261 SENP3-EIF4A1A0A087X0R7 540 aa21.07■□□□□ 0.96
KLHDC4-208ENST00000562261 KAT6BQ8WYB5 2073 aa21.07■□□□□ 0.96
KLHDC4-208ENST00000562261 MEGF6O75095 1541 aa21.07■□□□□ 0.96
KLHDC4-208ENST00000562261 FLT4P35916 1363 aa21.07■□□□□ 0.96
KLHDC4-208ENST00000562261 KIF24Q5T7B8 1368 aa21.07■□□□□ 0.96
KLHDC4-208ENST00000562261 NBPF6Q5VWK0 638 aa21.06■□□□□ 0.96
KLHDC4-208ENST00000562261 NBPF4Q96M43 638 aa21.06■□□□□ 0.96
KLHDC4-208ENST00000562261 EIF4G2P78344 907 aaKnown RBP eCLIP21.05■□□□□ 0.963e-8■■■■■ 56.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms