RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 PLA2G2EQ9NZK7 142 aa8.53□□□□□ -1.04
CNOT1-203ENST00000562046 A0A0G2JS52 829 aa8.52□□□□□ -1.05
CNOT1-203ENST00000562046 USP17L5A8MUK1 530 aa8.52□□□□□ -1.05
CNOT1-203ENST00000562046 TSGA10IPQ3SY00 556 aa8.52□□□□□ -1.05
CNOT1-203ENST00000562046 RC3H1Q5TC82 1133 aaKnown RBP8.52□□□□□ -1.05
CNOT1-203ENST00000562046 RNF135Q8IUD6 432 aa8.52□□□□□ -1.05
CNOT1-203ENST00000562046 CCDC85AQ96PX6 553 aaPredicted RBP8.52□□□□□ -1.05
CNOT1-203ENST00000562046 USP17L3A6NCW0 530 aa8.51□□□□□ -1.05
CNOT1-203ENST00000562046 USP17L4A6NCW7 530 aa8.51□□□□□ -1.05
CNOT1-203ENST00000562046 SIAH2O43255 324 aa8.51□□□□□ -1.05
CNOT1-203ENST00000562046 SLC19A1P41440 591 aa8.51□□□□□ -1.05
CNOT1-203ENST00000562046 USP17L2Q6R6M4 530 aa8.51□□□□□ -1.05
CNOT1-203ENST00000562046 USP17L1Q7RTZ2 530 aa8.51□□□□□ -1.05
CNOT1-203ENST00000562046 PLPP7Q8NBV4 271 aa8.51□□□□□ -1.05
CNOT1-203ENST00000562046 CDV3Q9UKY7 258 aaKnown RBP8.51□□□□□ -1.05
CNOT1-203ENST00000562046 MAP4K5Q9Y4K4 846 aa8.51□□□□□ -1.05
CNOT1-203ENST00000562046 MAP7D1Q3KQU3 841 aa8.5□□□□□ -1.05
CNOT1-203ENST00000562046 MPNDQ8N594 471 aa8.5□□□□□ -1.05
CNOT1-203ENST00000562046 CDK15Q96Q40 435 aa8.5□□□□□ -1.05
CNOT1-203ENST00000562046 LZTS3O60299 673 aaPredicted RBP8.49□□□□□ -1.05
CNOT1-203ENST00000562046 NCOA4Q13772 614 aa8.49□□□□□ -1.05
CNOT1-203ENST00000562046 NBPF20Q3BBV1 942 aa8.49□□□□□ -1.05
CNOT1-203ENST00000562046 SPRYD7Q5W111 196 aa8.49□□□□□ -1.05
CNOT1-203ENST00000562046 DEPDC4Q8N2C3 294 aa8.49□□□□□ -1.05
CNOT1-203ENST00000562046 RETREG2Q8NC44 543 aa8.49□□□□□ -1.05
CNOT1-203ENST00000562046 EHBP1Q8NDI1 1231 aa8.49□□□□□ -1.05
CNOT1-203ENST00000562046 WNT7AO00755 349 aa8.48□□□□□ -1.05
CNOT1-203ENST00000562046 ATG7O95352 703 aa8.48□□□□□ -1.05
CNOT1-203ENST00000562046 CDCA8Q53HL2 280 aa8.48□□□□□ -1.05
CNOT1-203ENST00000562046 SEPT12Q8IYM1 358 aa8.48□□□□□ -1.05
CNOT1-203ENST00000562046 KCTD15Q96SI1 283 aaPredicted RBP8.48□□□□□ -1.05
CNOT1-203ENST00000562046 GRM5P41594 1212 aa8.47□□□□□ -1.05
CNOT1-203ENST00000562046 RNF20Q5VTR2 975 aa8.47□□□□□ -1.05
CNOT1-203ENST00000562046 VRTNQ9H8Y1 702 aa8.47□□□□□ -1.05
CNOT1-203ENST00000562046 ACIN1Q9UKV3 1341 aaKnown RBP8.47□□□□□ -1.05
CNOT1-203ENST00000562046 INTS6LQ5JSJ4 861 aaKnown RBP8.46□□□□□ -1.06
CNOT1-203ENST00000562046 CDCA7Q9BWT1 371 aaPredicted RBP8.46□□□□□ -1.06
CNOT1-203ENST00000562046 MKRN1Q9UHC7 482 aaKnown RBP8.46□□□□□ -1.06
CNOT1-203ENST00000562046 VASH1Q7L8A9 365 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-203ENST00000562046 ZNF598Q86UK7 904 aaKnown RBP8.45□□□□□ -1.06
CNOT1-203ENST00000562046 CCDC125Q86Z20 511 aa8.45□□□□□ -1.06
CNOT1-203ENST00000562046 MRGPRX2Q96LB1 330 aa8.45□□□□□ -1.06
CNOT1-203ENST00000562046 DOLKQ9UPQ8 538 aa8.45□□□□□ -1.06
CNOT1-203ENST00000562046 TLL2Q9Y6L7 1015 aa8.45□□□□□ -1.06
CNOT1-203ENST00000562046 V9GY48 417 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-203ENST00000562046 ELOAQ14241 798 aaKnown RBP8.44□□□□□ -1.06
CNOT1-203ENST00000562046 TRAIPQ9BWF2 469 aa8.44□□□□□ -1.06
CNOT1-203ENST00000562046 PKD2L1Q9P0L9 805 aa8.44□□□□□ -1.06
CNOT1-203ENST00000562046 FAM196BA6NMK8 535 aa8.43□□□□□ -1.06
CNOT1-203ENST00000562046 ATP5J2-PTCD1G3V325 749 aa8.43□□□□□ -1.06
CNOT1-203ENST00000562046 EML3Q32P44 896 aa8.43□□□□□ -1.06
CNOT1-203ENST00000562046 CRTC2Q53ET0 693 aaPredicted RBP8.43□□□□□ -1.06
CNOT1-203ENST00000562046 ZNF697Q5TEC3 545 aa8.43□□□□□ -1.06
CNOT1-203ENST00000562046 PRKD2Q9BZL6 878 aa8.43□□□□□ -1.06
CNOT1-203ENST00000562046 PCDHB11Q9Y5F2 797 aa8.43□□□□□ -1.06
CNOT1-203ENST00000562046 ERVH48-1M5A8F1 160 aa8.42□□□□□ -1.06
CNOT1-203ENST00000562046 PDIA4P13667 645 aaKnown RBP8.42□□□□□ -1.06
CNOT1-203ENST00000562046 PTK7Q13308 1070 aa8.42□□□□□ -1.06
CNOT1-203ENST00000562046 ARID5BQ14865 1188 aa8.42□□□□□ -1.06
CNOT1-203ENST00000562046 ZMIZ1Q9ULJ6 1067 aa8.42□□□□□ -1.06
CNOT1-203ENST00000562046 TMEM88BA6NKF7 163 aa8.41□□□□□ -1.06
CNOT1-203ENST00000562046 ZBTB7BO15156 539 aaPredicted RBP8.41□□□□□ -1.06
CNOT1-203ENST00000562046 DKK1O94907 266 aa8.41□□□□□ -1.06
CNOT1-203ENST00000562046 ADH1CP00326 375 aa8.41□□□□□ -1.06
CNOT1-203ENST00000562046 FSHRP23945 695 aa8.41□□□□□ -1.06
CNOT1-203ENST00000562046 CLDN10P78369 228 aa8.41□□□□□ -1.06
CNOT1-203ENST00000562046 OXLD1Q5BKU9 147 aa8.41□□□□□ -1.06
CNOT1-203ENST00000562046 NOD1Q9Y239 953 aa8.41□□□□□ -1.06
CNOT1-203ENST00000562046 USTQ9Y2C2 406 aa8.41□□□□□ -1.06
CNOT1-203ENST00000562046 USP17L15C9J2P7 530 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 USP17L10C9JJH3 530 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 USP17L13C9JLJ4 530 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 USP17L12C9JPN9 530 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 USP17L11C9JVI0 530 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 USP17L21D6R901 530 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 USP17L18D6R9N7 530 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 USP17L22D6RA61 530 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 USP17L17D6RBQ6 530 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 USP17L19D6RCP7 530 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 USP17L20D6RJB6 530 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 GDF9O60383 454 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 RAB15P59190 212 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 USP17L24Q0WX57 530 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 OGFOD1Q8N543 542 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 PCDHGA11Q9Y5H2 935 aa8.4□□□□□ -1.06
CNOT1-203ENST00000562046 NR3C2P08235 984 aa8.39□□□□□ -1.07
CNOT1-203ENST00000562046 CSB-PGBD3P0DP91 1061 aa8.39□□□□□ -1.07
CNOT1-203ENST00000562046 RASA1P20936 1047 aa8.39□□□□□ -1.07
CNOT1-203ENST00000562046 SCTRP47872 440 aa8.39□□□□□ -1.07
CNOT1-203ENST00000562046 USP4Q13107 963 aa8.39□□□□□ -1.07
CNOT1-203ENST00000562046 NR5A1Q13285 461 aa8.39□□□□□ -1.07
CNOT1-203ENST00000562046 KIAA1024Q9UPX6 916 aa8.39□□□□□ -1.07
CNOT1-203ENST00000562046 CARNS1A5YM72 827 aa8.38□□□□□ -1.07
CNOT1-203ENST00000562046 ERVK-9P63128 1117 aa8.38□□□□□ -1.07
CNOT1-203ENST00000562046 LARP1Q6PKG0 1096 aaKnown RBP8.38□□□□□ -1.07
CNOT1-203ENST00000562046 TRIM67Q6ZTA4 783 aa8.38□□□□□ -1.07
CNOT1-203ENST00000562046 TRIM50Q86XT4 487 aa8.38□□□□□ -1.07
CNOT1-203ENST00000562046 STK32AQ8WU08 396 aa8.38□□□□□ -1.07
CNOT1-203ENST00000562046 TMPRSS4Q9NRS4 437 aa8.38□□□□□ -1.07
CNOT1-203ENST00000562046 NOVA2Q9UNW9 492 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms