RNA–Protein interactions for RNA: ENST00000561956.1

AC009054.2-201, humanhuman

TSL 3 BASIC

Gene AC009054.2, Length 374 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009054.2-201ENST00000561956 NUDCQ9Y266 331 aa14.47□□□□□ -0.09
AC009054.2-201ENST00000561956 RGPD1P0DJD0 1748 aa14.46□□□□□ -0.09
AC009054.2-201ENST00000561956 ABCC6O95255 1503 aa14.46□□□□□ -0.09
AC009054.2-201ENST00000561956 HOXC9P31274 260 aa14.46□□□□□ -0.09
AC009054.2-201ENST00000561956 IL13P35225 146 aa14.46□□□□□ -0.09
AC009054.2-201ENST00000561956 AMPHP49418 695 aa14.46□□□□□ -0.09
AC009054.2-201ENST00000561956 HNRNPUQ00839 825 aaKnown RBP eCLIP14.45□□□□□ -0.1
AC009054.2-201ENST00000561956 EIF4A2Q14240 407 aaKnown RBP14.45□□□□□ -0.1
AC009054.2-201ENST00000561956 HSP90AB2PQ58FF8 381 aa14.45□□□□□ -0.1
AC009054.2-201ENST00000561956 IP6K1Q92551 441 aa14.45□□□□□ -0.1
AC009054.2-201ENST00000561956 LRRC59Q96AG4 307 aaKnown RBP14.45□□□□□ -0.1
AC009054.2-201ENST00000561956 CPDO75976 1380 aa14.45□□□□□ -0.1
AC009054.2-201ENST00000561956 COL18A1P39060 1754 aa14.45□□□□□ -0.1
AC009054.2-201ENST00000561956 PLEKHG5O94827 1062 aa14.44□□□□□ -0.1
AC009054.2-201ENST00000561956 CABLES1Q8TDN4 633 aa14.44□□□□□ -0.1
AC009054.2-201ENST00000561956 U2SURPO15042 1029 aaKnown RBP14.43□□□□□ -0.1
AC009054.2-201ENST00000561956 U2AF1L5P0DN76 240 aaPredicted RBP14.43□□□□□ -0.1
AC009054.2-201ENST00000561956 U2AF1Q01081 240 aaKnown RBP eCLIP14.43□□□□□ -0.1
AC009054.2-201ENST00000561956 ZC3H6P61129 1189 aaKnown RBP14.42□□□□□ -0.1
AC009054.2-201ENST00000561956 FOXD4L1Q9NU39 408 aa14.41□□□□□ -0.1
AC009054.2-201ENST00000561956 KIAA0232Q92628 1395 aa14.41□□□□□ -0.1
AC009054.2-201ENST00000561956 RGPD5Q99666 1765 aa14.41□□□□□ -0.1
AC009054.2-201ENST00000561956 ZBED9Q6R2W3 1325 aa14.41□□□□□ -0.1
AC009054.2-201ENST00000561956 LMO7Q8WWI1 1683 aa14.4□□□□□ -0.1
AC009054.2-201ENST00000561956 ZBTB7CA1YPR0 619 aa14.4□□□□□ -0.1
AC009054.2-201ENST00000561956 CCDC146Q8IYE0 955 aa14.4□□□□□ -0.1
AC009054.2-201ENST00000561956 IGSF1Q8N6C5 1336 aa14.4□□□□□ -0.1
AC009054.2-201ENST00000561956 CAMTA1Q9Y6Y1 1673 aa14.39□□□□□ -0.11
AC009054.2-201ENST00000561956 CNKSR2Q8WXI2 1034 aa14.39□□□□□ -0.11
AC009054.2-201ENST00000561956 RUNDC1Q96C34 613 aa14.39□□□□□ -0.11
AC009054.2-201ENST00000561956 RSPH6AQ9H0K4 717 aa14.39□□□□□ -0.11
AC009054.2-201ENST00000561956 FCHSD2O94868 740 aa14.38□□□□□ -0.11
AC009054.2-201ENST00000561956 PLEKHF1Q96S99 279 aa14.38□□□□□ -0.11
AC009054.2-201ENST00000561956 FAM208AQ9UK61 1670 aaKnown RBP14.38□□□□□ -0.11
AC009054.2-201ENST00000561956 KDRP35968 1356 aa14.37□□□□□ -0.11
AC009054.2-201ENST00000561956 HAP1P54257 671 aaPredicted RBP14.37□□□□□ -0.11
AC009054.2-201ENST00000561956 PNNQ9H307 717 aaKnown RBP14.37□□□□□ -0.11
AC009054.2-201ENST00000561956 AXIN2Q9Y2T1 843 aa14.37□□□□□ -0.11
AC009054.2-201ENST00000561956 NCAPD2Q15021 1401 aa14.37□□□□□ -0.11
AC009054.2-201ENST00000561956 RGPD2P0DJD1 1756 aa14.37□□□□□ -0.11
AC009054.2-201ENST00000561956 HMOX1P09601 288 aa14.36□□□□□ -0.11
AC009054.2-201ENST00000561956 CHRNA2Q15822 529 aa14.36□□□□□ -0.11
AC009054.2-201ENST00000561956 ANKRD24Q8TF21 1146 aa14.36□□□□□ -0.11
AC009054.2-201ENST00000561956 LTV1Q96GA3 475 aaPredicted RBP14.36□□□□□ -0.11
AC009054.2-201ENST00000561956 EYA1Q99502 592 aa14.36□□□□□ -0.11
AC009054.2-201ENST00000561956 PRDM11Q9NQV5 511 aa14.36□□□□□ -0.11
AC009054.2-201ENST00000561956 COL14A1Q05707 1796 aaKnown RBP14.36□□□□□ -0.11
AC009054.2-201ENST00000561956 ERBB3P21860 1342 aa14.36□□□□□ -0.11
AC009054.2-201ENST00000561956 SENP3-EIF4A1A0A087X0R7 540 aa14.35□□□□□ -0.11
AC009054.2-201ENST00000561956 APAF1O14727 1248 aa14.35□□□□□ -0.11
AC009054.2-201ENST00000561956 CENPBP07199 599 aaPredicted RBP14.35□□□□□ -0.11
AC009054.2-201ENST00000561956 PRKAR2BP31323 418 aa14.35□□□□□ -0.11
AC009054.2-201ENST00000561956 SULT6B1Q6IMI4 303 aa14.35□□□□□ -0.11
AC009054.2-201ENST00000561956 AEBP1Q8IUX7 1158 aa14.35□□□□□ -0.11
AC009054.2-201ENST00000561956 JCADQ9P266 1359 aa14.34□□□□□ -0.11
AC009054.2-201ENST00000561956 TCP11L2Q8N4U5 519 aa14.34□□□□□ -0.11
AC009054.2-201ENST00000561956 NGEFQ8N5V2 710 aa14.34□□□□□ -0.11
AC009054.2-201ENST00000561956 MAPK8IP3Q9UPT6 1336 aa14.34□□□□□ -0.11
AC009054.2-201ENST00000561956 COL5A2P05997 1499 aaPredicted RBP14.33□□□□□ -0.12
AC009054.2-201ENST00000561956 NBPF6Q5VWK0 638 aa14.32□□□□□ -0.12
AC009054.2-201ENST00000561956 NBPF4Q96M43 638 aa14.32□□□□□ -0.12
AC009054.2-201ENST00000561956 ZNF521Q96K83 1311 aa14.32□□□□□ -0.12
AC009054.2-201ENST00000561956 PLCH1Q4KWH8 1693 aa14.31□□□□□ -0.12
AC009054.2-201ENST00000561956 FAM83GA6ND36 823 aa14.31□□□□□ -0.12
AC009054.2-201ENST00000561956 PHACTR3Q96KR7 559 aa14.31□□□□□ -0.12
AC009054.2-201ENST00000561956 SALL2Q9Y467 1007 aaPredicted RBP14.31□□□□□ -0.12
AC009054.2-201ENST00000561956 NEFMP07197 916 aa14.3□□□□□ -0.12
AC009054.2-201ENST00000561956 HSPA1LP34931 641 aa14.3□□□□□ -0.12
AC009054.2-201ENST00000561956 TMPOP42166 694 aaKnown RBP14.3□□□□□ -0.12
AC009054.2-201ENST00000561956 USHBP1Q8N6Y0 703 aa14.3□□□□□ -0.12
AC009054.2-201ENST00000561956 DLG5Q8TDM6 1919 aa14.29□□□□□ -0.12
AC009054.2-201ENST00000561956 NFE2L2Q16236 605 aa14.29□□□□□ -0.12
AC009054.2-201ENST00000561956 CCDC27Q2M243 656 aa14.29□□□□□ -0.12
AC009054.2-201ENST00000561956 RRP7AQ9Y3A4 280 aaKnown RBP14.29□□□□□ -0.12
AC009054.2-201ENST00000561956 WDR17Q8IZU2 1322 aa14.29□□□□□ -0.12
AC009054.2-201ENST00000561956 NRAPQ86VF7 1730 aa14.29□□□□□ -0.12
AC009054.2-201ENST00000561956 SPATA31A6Q5VVP1 1343 aa14.28□□□□□ -0.12
AC009054.2-201ENST00000561956 NWD2Q9ULI1 1742 aa14.28□□□□□ -0.12
AC009054.2-201ENST00000561956 CSB-PGBD3P0DP91 1061 aa14.27□□□□□ -0.13
AC009054.2-201ENST00000561956 PDE3BQ13370 1112 aa14.27□□□□□ -0.13
AC009054.2-201ENST00000561956 NEUROD2Q15784 382 aa14.27□□□□□ -0.13
AC009054.2-201ENST00000561956 NLRP2Q9NX02 1062 aa14.27□□□□□ -0.13
AC009054.2-201ENST00000561956 LRP6O75581 1613 aa14.26□□□□□ -0.13
AC009054.2-201ENST00000561956 PLEKHG2Q9H7P9 1386 aa14.26□□□□□ -0.13
AC009054.2-201ENST00000561956 NUTM2BA6NNL0 878 aaPredicted RBP14.26□□□□□ -0.13
AC009054.2-201ENST00000561956 NUTM2EB1AL46 878 aaPredicted RBP14.26□□□□□ -0.13
AC009054.2-201ENST00000561956 ADAMTS2O95450 1211 aa14.26□□□□□ -0.13
AC009054.2-201ENST00000561956 RIPK4P57078 832 aa14.26□□□□□ -0.13
AC009054.2-201ENST00000561956 NUTM2AQ8IVF1 878 aaPredicted RBP14.26□□□□□ -0.13
AC009054.2-201ENST00000561956 WWC1Q8IX03 1113 aa14.26□□□□□ -0.13
AC009054.2-201ENST00000561956 BTG4Q9NY30 223 aa14.26□□□□□ -0.13
AC009054.2-201ENST00000561956 TRIM35Q9UPQ4 493 aa14.25□□□□□ -0.13
AC009054.2-201ENST00000561956 SLIT2O94813 1529 aa14.25□□□□□ -0.13
AC009054.2-201ENST00000561956 CRB1P82279 1406 aa14.24□□□□□ -0.13
AC009054.2-201ENST00000561956 GAS2L2Q8NHY3 880 aa14.24□□□□□ -0.13
AC009054.2-201ENST00000561956 CARD10Q9BWT7 1032 aa14.24□□□□□ -0.13
AC009054.2-201ENST00000561956 MEGF6O75095 1541 aa14.24□□□□□ -0.13
AC009054.2-201ENST00000561956 PARP4Q9UKK3 1724 aaKnown RBP14.24□□□□□ -0.13
AC009054.2-201ENST00000561956 GOLGA2Q08379 1002 aa14.23□□□□□ -0.13
AC009054.2-201ENST00000561956 LMOD3Q0VAK6 560 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms