RNA–Protein interactions for RNA: ENST00000561610.1

PPP4C-202, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4C, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-202ENST00000561610 CPDO75976 1380 aa25.55■■□□□ 1.68
PPP4C-202ENST00000561610 GLI3P10071 1580 aa25.55■■□□□ 1.68
PPP4C-202ENST00000561610 NWD2Q9ULI1 1742 aa25.55■■□□□ 1.68
PPP4C-202ENST00000561610 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.53■■□□□ 1.68
PPP4C-202ENST00000561610 NFAT5O94916 1531 aa25.52■■□□□ 1.68
PPP4C-202ENST00000561610 ARHGEF25Q86VW2 580 aa25.52■■□□□ 1.68
PPP4C-202ENST00000561610 BRWD3Q6RI45 1802 aa25.51■■□□□ 1.67
PPP4C-202ENST00000561610 FBLN1P23142 703 aa25.51■■□□□ 1.67
PPP4C-202ENST00000561610 TNNT2P45379 298 aaPredicted RBP25.51■■□□□ 1.67
PPP4C-202ENST00000561610 LTN1O94822 1766 aa25.51■■□□□ 1.67
PPP4C-202ENST00000561610 CSB-PGBD3P0DP91 1061 aa25.49■■□□□ 1.67
PPP4C-202ENST00000561610 AMPHP49418 695 aa25.49■■□□□ 1.67
PPP4C-202ENST00000561610 NRAPQ86VF7 1730 aa25.48■■□□□ 1.67
PPP4C-202ENST00000561610 AATKQ6ZMQ8 1374 aa25.48■■□□□ 1.67
PPP4C-202ENST00000561610 RRS1Q15050 365 aaKnown RBP25.48■■□□□ 1.67
PPP4C-202ENST00000561610 A0A0G2JS52 829 aa25.47■■□□□ 1.67
PPP4C-202ENST00000561610 MYT1Q01538 1121 aa25.47■■□□□ 1.67
PPP4C-202ENST00000561610 VPS72Q15906 364 aa25.47■■□□□ 1.67
PPP4C-202ENST00000561610 MORC1Q86VD1 984 aa25.47■■□□□ 1.67
PPP4C-202ENST00000561610 USP35Q9P2H5 1018 aa25.47■■□□□ 1.67
PPP4C-202ENST00000561610 CAMTA1Q9Y6Y1 1673 aa25.47■■□□□ 1.67
PPP4C-202ENST00000561610 CC2D1BQ5T0F9 858 aaKnown RBP25.46■■□□□ 1.67
PPP4C-202ENST00000561610 LMO7Q8WWI1 1683 aa25.45■■□□□ 1.67
PPP4C-202ENST00000561610 PPM1GO15355 546 aaPredicted RBP25.45■■□□□ 1.66
PPP4C-202ENST00000561610 SEPT12Q8IYM1 358 aa25.45■■□□□ 1.66
PPP4C-202ENST00000561610 RGPD5Q99666 1765 aa25.45■■□□□ 1.66
PPP4C-202ENST00000561610 ANKRD26Q9UPS8 1709 aa25.45■■□□□ 1.66
PPP4C-202ENST00000561610 AXIN2Q9Y2T1 843 aa25.44■■□□□ 1.66
PPP4C-202ENST00000561610 NSD2O96028 1365 aa25.44■■□□□ 1.66
PPP4C-202ENST00000561610 MAP3K19Q56UN5 1328 aa25.44■■□□□ 1.66
PPP4C-202ENST00000561610 LARP1Q6PKG0 1096 aaKnown RBP25.43■■□□□ 1.66
PPP4C-202ENST00000561610 TOM1L2Q6ZVM7 507 aa25.43■■□□□ 1.66
PPP4C-202ENST00000561610 LTV1Q96GA3 475 aaPredicted RBP25.43■■□□□ 1.66
PPP4C-202ENST00000561610 BAG6P46379 1132 aa25.42■■□□□ 1.66
PPP4C-202ENST00000561610 COL18A1P39060 1754 aa25.42■■□□□ 1.66
PPP4C-202ENST00000561610 COL5A2P05997 1499 aaPredicted RBP25.42■■□□□ 1.66
PPP4C-202ENST00000561610 DDX10Q13206 875 aaKnown RBP25.4■■□□□ 1.66
PPP4C-202ENST00000561610 PER1O15534 1290 aaPredicted RBP25.39■■□□□ 1.66
PPP4C-202ENST00000561610 AMER1Q5JTC6 1135 aaPredicted RBP25.39■■□□□ 1.66
PPP4C-202ENST00000561610 IP6K1Q92551 441 aa25.39■■□□□ 1.66
PPP4C-202ENST00000561610 HOXC9P31274 260 aa25.38■■□□□ 1.65
PPP4C-202ENST00000561610 FAM98CQ17RN3 349 aaKnown RBP25.38■■□□□ 1.65
PPP4C-202ENST00000561610 KRT27Q7Z3Y8 459 aa25.38■■□□□ 1.65
PPP4C-202ENST00000561610 ANKRD24Q8TF21 1146 aa25.38■■□□□ 1.65
PPP4C-202ENST00000561610 EMILIN1Q9Y6C2 1016 aa25.38■■□□□ 1.65
PPP4C-202ENST00000561610 SPATA31A5Q5VU36 1347 aa25.38■■□□□ 1.65
PPP4C-202ENST00000561610 SPATA31A7Q8IWB4 1347 aa25.38■■□□□ 1.65
PPP4C-202ENST00000561610 NLRP2Q9NX02 1062 aa25.37■■□□□ 1.65
PPP4C-202ENST00000561610 WDR17Q8IZU2 1322 aa25.36■■□□□ 1.65
PPP4C-202ENST00000561610 ABCC6O95255 1503 aa25.36■■□□□ 1.65
PPP4C-202ENST00000561610 MAP2P11137 1827 aaKnown RBP25.36■■□□□ 1.65
PPP4C-202ENST00000561610 ZNF316A6NFI3 1004 aaPredicted RBP25.36■■□□□ 1.65
PPP4C-202ENST00000561610 SPATA31A1Q5TZJ5 1347 aa25.35■■□□□ 1.65
PPP4C-202ENST00000561610 CRB1P82279 1406 aa25.35■■□□□ 1.65
PPP4C-202ENST00000561610 YY1P25490 414 aa25.35■■□□□ 1.65
PPP4C-202ENST00000561610 RTL1A6NKG5 1358 aa25.34■■□□□ 1.65
PPP4C-202ENST00000561610 R3HDM1Q15032 1099 aaKnown RBP25.34■■□□□ 1.65
PPP4C-202ENST00000561610 FLT4P35916 1363 aa25.33■■□□□ 1.65
PPP4C-202ENST00000561610 TCP11L2Q8N4U5 519 aa25.33■■□□□ 1.64
PPP4C-202ENST00000561610 ERBB3P21860 1342 aa25.32■■□□□ 1.64
PPP4C-202ENST00000561610 SMG6Q86US8 1419 aaKnown RBP25.32■■□□□ 1.64
PPP4C-202ENST00000561610 HSP90AB2PQ58FF8 381 aa25.31■■□□□ 1.64
PPP4C-202ENST00000561610 POLKQ9UBT6 870 aa25.31■■□□□ 1.64
PPP4C-202ENST00000561610 PEAK1Q9H792 1746 aa25.3■■□□□ 1.64
PPP4C-202ENST00000561610 EN1Q05925 392 aaPredicted RBP25.3■■□□□ 1.64
PPP4C-202ENST00000561610 KIF24Q5T7B8 1368 aa25.27■■□□□ 1.64
PPP4C-202ENST00000561610 NPC1L1Q9UHC9 1359 aa25.27■■□□□ 1.64
PPP4C-202ENST00000561610 CARD10Q9BWT7 1032 aa25.27■■□□□ 1.64
PPP4C-202ENST00000561610 THRAP3Q9Y2W1 955 aaKnown RBP25.27■■□□□ 1.64
PPP4C-202ENST00000561610 INSRP06213 1382 aa25.26■■□□□ 1.63
PPP4C-202ENST00000561610 RGPD1P0DJD0 1748 aa25.26■■□□□ 1.63
PPP4C-202ENST00000561610 BARGINQ6ZT62 677 aa25.24■■□□□ 1.63
PPP4C-202ENST00000561610 FAM208AQ9UK61 1670 aaKnown RBP25.23■■□□□ 1.63
PPP4C-202ENST00000561610 RGPD2P0DJD1 1756 aa25.22■■□□□ 1.63
PPP4C-202ENST00000561610 USHBP1Q8N6Y0 703 aa25.22■■□□□ 1.63
PPP4C-202ENST00000561610 ONECUT3O60422 494 aaPredicted RBP25.21■■□□□ 1.63
PPP4C-202ENST00000561610 MTHFSP49914 203 aa25.21■■□□□ 1.63
PPP4C-202ENST00000561610 PDE3BQ13370 1112 aa25.2■■□□□ 1.62
PPP4C-202ENST00000561610 FAM182BQ5T319 152 aa25.19■■□□□ 1.62
PPP4C-202ENST00000561610 NBPF6Q5VWK0 638 aa25.19■■□□□ 1.62
PPP4C-202ENST00000561610 NBPF4Q96M43 638 aa25.19■■□□□ 1.62
PPP4C-202ENST00000561610 CDCA7Q9BWT1 371 aaPredicted RBP25.18■■□□□ 1.62
PPP4C-202ENST00000561610 THSD7AQ9UPZ6 1657 aa25.18■■□□□ 1.62
PPP4C-202ENST00000561610 IL2RBP14784 551 aa25.17■■□□□ 1.62
PPP4C-202ENST00000561610 EIF4A2Q14240 407 aaKnown RBP25.17■■□□□ 1.62
PPP4C-202ENST00000561610 DDB1Q16531 1140 aa25.17■■□□□ 1.62
PPP4C-202ENST00000561610 WNK3Q9BYP7 1800 aa25.17■■□□□ 1.62
PPP4C-202ENST00000561610 EZH2Q15910 746 aaKnown RBP25.15■■□□□ 1.62
PPP4C-202ENST00000561610 TNS1Q9HBL0 1735 aaKnown RBP25.15■■□□□ 1.62
PPP4C-202ENST00000561610 EXOC5O00471 708 aa25.14■■□□□ 1.62
PPP4C-202ENST00000561610 PPP2R1AP30153 589 aa25.13■■□□□ 1.61
PPP4C-202ENST00000561610 RAPGEF4Q8WZA2 1011 aa25.13■■□□□ 1.61
PPP4C-202ENST00000561610 CFAP53Q96M91 514 aa25.13■■□□□ 1.61
PPP4C-202ENST00000561610 PARP4Q9UKK3 1724 aaKnown RBP25.13■■□□□ 1.61
PPP4C-202ENST00000561610 EYA1Q99502 592 aa25.12■■□□□ 1.61
PPP4C-202ENST00000561610 TATP17735 454 aaPredicted RBP25.12■■□□□ 1.61
PPP4C-202ENST00000561610 DISP2A7MBM2 1401 aa25.11■■□□□ 1.61
PPP4C-202ENST00000561610 LRRC37A3O60309 1634 aa25.1■■□□□ 1.61
PPP4C-202ENST00000561610 DIAPH1O60610 1272 aaKnown RBP25.1■■□□□ 1.61
PPP4C-202ENST00000561610 RALBP1Q15311 655 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms