RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 NINLQ9Y2I6 1382 aa8.32□□□□□ -1.08
HERC1-213ENST00000561359 LAMC1P11047 1609 aa8.32□□□□□ -1.08
HERC1-213ENST00000561359 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.31□□□□□ -1.08
HERC1-213ENST00000561359 PCDH10Q9P2E7 1040 aa8.31□□□□□ -1.08
HERC1-213ENST00000561359 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.31□□□□□ -1.08
HERC1-213ENST00000561359 DAPK1P53355 1430 aa8.3□□□□□ -1.08
HERC1-213ENST00000561359 NALCNQ8IZF0 1738 aa8.3□□□□□ -1.08
HERC1-213ENST00000561359 FAM205CA6NFA0 338 aa8.3□□□□□ -1.08
HERC1-213ENST00000561359 KCNQ2O43526 872 aa8.3□□□□□ -1.08
HERC1-213ENST00000561359 HOXB1P14653 301 aaPredicted RBP8.3□□□□□ -1.08
HERC1-213ENST00000561359 NBPF8Q3BBV2 869 aa8.3□□□□□ -1.08
HERC1-213ENST00000561359 NBPF14Q5TI25 921 aa8.3□□□□□ -1.08
HERC1-213ENST00000561359 CDAN1Q8IWY9 1227 aa8.3□□□□□ -1.08
HERC1-213ENST00000561359 CAMKK2Q96RR4 588 aa8.3□□□□□ -1.08
HERC1-213ENST00000561359 ZSWIM6Q9HCJ5 1215 aa8.3□□□□□ -1.08
HERC1-213ENST00000561359 LRPPRCP42704 1394 aaKnown RBP8.3□□□□□ -1.08
HERC1-213ENST00000561359 DISP2A7MBM2 1401 aa8.29□□□□□ -1.08
HERC1-213ENST00000561359 TRIM37O94972 964 aa8.29□□□□□ -1.08
HERC1-213ENST00000561359 APBA3O96018 575 aa8.29□□□□□ -1.08
HERC1-213ENST00000561359 KANK4Q5T7N3 995 aaPredicted RBP8.29□□□□□ -1.08
HERC1-213ENST00000561359 PXDNQ92626 1479 aa8.29□□□□□ -1.08
HERC1-213ENST00000561359 MARF1Q9Y4F3 1742 aaKnown RBP8.29□□□□□ -1.08
HERC1-213ENST00000561359 ADGRL2O95490 1459 aa8.28□□□□□ -1.08
HERC1-213ENST00000561359 ROBO2Q9HCK4 1378 aa8.28□□□□□ -1.08
HERC1-213ENST00000561359 ARSIQ5FYB1 569 aa8.28□□□□□ -1.08
HERC1-213ENST00000561359 CABLES1Q8TDN4 633 aa8.28□□□□□ -1.08
HERC1-213ENST00000561359 GPHNQ9NQX3 736 aaPredicted RBP8.28□□□□□ -1.08
HERC1-213ENST00000561359 ERBB3P21860 1342 aa8.28□□□□□ -1.08
HERC1-213ENST00000561359 SPATA31A3Q5VYP0 1347 aa8.28□□□□□ -1.08
HERC1-213ENST00000561359 NUTM2FA1L443 756 aa8.27□□□□□ -1.09
HERC1-213ENST00000561359 PARD3Q8TEW0 1356 aa8.26□□□□□ -1.09
HERC1-213ENST00000561359 NRXN3Q9Y4C0 1643 aa8.26□□□□□ -1.09
HERC1-213ENST00000561359 GIGYF1O75420 1035 aaPredicted RBP8.26□□□□□ -1.09
HERC1-213ENST00000561359 LMOD2Q6P5Q4 547 aa8.26□□□□□ -1.09
HERC1-213ENST00000561359 FAM196AQ6ZSG2 479 aa8.26□□□□□ -1.09
HERC1-213ENST00000561359 PLPP6Q8IY26 295 aa8.26□□□□□ -1.09
HERC1-213ENST00000561359 HS3ST6Q96QI5 342 aa8.26□□□□□ -1.09
HERC1-213ENST00000561359 PLSCR2Q9NRY7 297 aa8.26□□□□□ -1.09
HERC1-213ENST00000561359 CROCC2H7BZ55 1655 aa8.26□□□□□ -1.09
HERC1-213ENST00000561359 ANKRD50Q9ULJ7 1429 aa8.26□□□□□ -1.09
HERC1-213ENST00000561359 FAM83GA6ND36 823 aa8.25□□□□□ -1.09
HERC1-213ENST00000561359 PDE4AP27815 886 aa8.25□□□□□ -1.09
HERC1-213ENST00000561359 FOXK1P85037 733 aa8.25□□□□□ -1.09
HERC1-213ENST00000561359 DSG2Q14126 1118 aa8.25□□□□□ -1.09
HERC1-213ENST00000561359 GPR153Q6NV75 609 aa8.25□□□□□ -1.09
HERC1-213ENST00000561359 KRT28Q7Z3Y7 464 aa8.25□□□□□ -1.09
HERC1-213ENST00000561359 SPRYD3Q8NCJ5 442 aa8.25□□□□□ -1.09
HERC1-213ENST00000561359 RGPD1P0DJD0 1748 aa8.25□□□□□ -1.09
HERC1-213ENST00000561359 USP32Q8NFA0 1604 aa8.25□□□□□ -1.09
HERC1-213ENST00000561359 KHSRPQ92945 711 aaKnown RBP eCLIP8.24□□□□□ -1.09
HERC1-213ENST00000561359 BTG4Q9NY30 223 aa8.24□□□□□ -1.09
HERC1-213ENST00000561359 CAMTA1Q9Y6Y1 1673 aa8.24□□□□□ -1.09
HERC1-213ENST00000561359 ADGRB2O60241 1585 aa8.23□□□□□ -1.09
HERC1-213ENST00000561359 HFM1A2PYH4 1435 aa8.23□□□□□ -1.09
HERC1-213ENST00000561359 CCDC144AA2RUR9 1427 aa8.23□□□□□ -1.09
HERC1-213ENST00000561359 PTPN23Q9H3S7 1636 aa8.23□□□□□ -1.09
HERC1-213ENST00000561359 CFAP44Q96MT7 982 aa8.23□□□□□ -1.09
HERC1-213ENST00000561359 SLC34A2O95436 690 aa8.22□□□□□ -1.09
HERC1-213ENST00000561359 PSME1Q06323 249 aa8.22□□□□□ -1.09
HERC1-213ENST00000561359 VARS2Q5ST30 1063 aaKnown RBP8.22□□□□□ -1.09
HERC1-213ENST00000561359 PAXIP1Q6ZW49 1069 aaPredicted RBP8.22□□□□□ -1.09
HERC1-213ENST00000561359 LARP6Q9BRS8 491 aaKnown RBP8.22□□□□□ -1.09
HERC1-213ENST00000561359 CRISPLD2Q9H0B8 497 aa8.22□□□□□ -1.09
HERC1-213ENST00000561359 PCDHGA4Q9Y5G9 962 aa8.22□□□□□ -1.09
HERC1-213ENST00000561359 SPATA31A5Q5VU36 1347 aa8.22□□□□□ -1.09
HERC1-213ENST00000561359 SPATA31A7Q8IWB4 1347 aa8.22□□□□□ -1.09
HERC1-213ENST00000561359 NUDT7P0C024 238 aa8.21□□□□□ -1.1
HERC1-213ENST00000561359 PPP1R15BQ5SWA1 713 aa8.21□□□□□ -1.1
HERC1-213ENST00000561359 TNS3Q68CZ2 1445 aa8.2□□□□□ -1.1
HERC1-213ENST00000561359 POTEB3A0JP26 581 aa8.2□□□□□ -1.1
HERC1-213ENST00000561359 TBC1D12O60347 775 aa8.2□□□□□ -1.1
HERC1-213ENST00000561359 ZBTB7AO95365 584 aa8.2□□□□□ -1.1
HERC1-213ENST00000561359 POTEBQ6S5H4 581 aa8.2□□□□□ -1.1
HERC1-213ENST00000561359 E9PCH4 1651 aa8.2□□□□□ -1.1
HERC1-213ENST00000561359 TNS1Q9HBL0 1735 aaKnown RBP8.2□□□□□ -1.1
HERC1-213ENST00000561359 NWD2Q9ULI1 1742 aa8.2□□□□□ -1.1
HERC1-213ENST00000561359 NAIPQ13075 1403 aa8.2□□□□□ -1.1
HERC1-213ENST00000561359 PLCH1Q4KWH8 1693 aa8.19□□□□□ -1.1
HERC1-213ENST00000561359 PDE3BQ13370 1112 aa8.19□□□□□ -1.1
HERC1-213ENST00000561359 FAM50AQ14320 339 aaKnown RBP8.19□□□□□ -1.1
HERC1-213ENST00000561359 DDX27Q96GQ7 796 aaKnown RBP8.19□□□□□ -1.1
HERC1-213ENST00000561359 SYT17Q9BSW7 474 aa8.19□□□□□ -1.1
HERC1-213ENST00000561359 FHDC1Q9C0D6 1143 aaPredicted RBP8.19□□□□□ -1.1
HERC1-213ENST00000561359 ARHGEF10O15013 1369 aa8.19□□□□□ -1.1
HERC1-213ENST00000561359 NUP155O75694 1391 aa8.19□□□□□ -1.1
HERC1-213ENST00000561359 CDC42BPGQ6DT37 1551 aa8.18□□□□□ -1.1
HERC1-213ENST00000561359 IQGAP3Q86VI3 1631 aa8.18□□□□□ -1.1
HERC1-213ENST00000561359 ZNF316A6NFI3 1004 aaPredicted RBP8.18□□□□□ -1.1
HERC1-213ENST00000561359 WAPLQ7Z5K2 1190 aa8.18□□□□□ -1.1
HERC1-213ENST00000561359 STK26Q9P289 416 aa8.18□□□□□ -1.1
HERC1-213ENST00000561359 VPS8Q8N3P4 1428 aa8.18□□□□□ -1.1
HERC1-213ENST00000561359 GPR162Q16538 588 aa8.17□□□□□ -1.1
HERC1-213ENST00000561359 PDGFDQ9GZP0 370 aaPredicted RBP8.17□□□□□ -1.1
HERC1-213ENST00000561359 USP35Q9P2H5 1018 aa8.17□□□□□ -1.1
HERC1-213ENST00000561359 SBNO1A3KN83 1393 aa8.17□□□□□ -1.1
HERC1-213ENST00000561359 PRAG1Q86YV5 1406 aa8.17□□□□□ -1.1
HERC1-213ENST00000561359 PTGER2P43116 358 aa8.16□□□□□ -1.1
HERC1-213ENST00000561359 SPATA31A1Q5TZJ5 1347 aa8.16□□□□□ -1.1
HERC1-213ENST00000561359 NRKQ7Z2Y5 1582 aa8.16□□□□□ -1.1
HERC1-213ENST00000561359 PTCD2Q8WV60 388 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms