RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 ZMYND15Q9H091 742 aa9.76□□□□□ -0.85
USP8-218ENST00000561330 SOX11P35716 441 aa9.75□□□□□ -0.85
USP8-218ENST00000561330 GRM5P41594 1212 aa9.75□□□□□ -0.85
USP8-218ENST00000561330 NR5A1Q13285 461 aa9.75□□□□□ -0.85
USP8-218ENST00000561330 ERICH6Q7L0X2 663 aa9.75□□□□□ -0.85
USP8-218ENST00000561330 DGAT1O75907 488 aa9.74□□□□□ -0.85
USP8-218ENST00000561330 FSHRP23945 695 aa9.74□□□□□ -0.85
USP8-218ENST00000561330 SEMA3FQ13275 785 aa9.74□□□□□ -0.85
USP8-218ENST00000561330 PKDCCQ504Y2 493 aa9.74□□□□□ -0.85
USP8-218ENST00000561330 TRAK2O60296 914 aa9.72□□□□□ -0.85
USP8-218ENST00000561330 NNTQ13423 1086 aa9.72□□□□□ -0.85
USP8-218ENST00000561330 POM121CA8CG34 1229 aa9.71□□□□□ -0.86
USP8-218ENST00000561330 GIGYF1O75420 1035 aaPredicted RBP9.71□□□□□ -0.86
USP8-218ENST00000561330 CEP126Q9P2H0 1117 aa9.71□□□□□ -0.86
USP8-218ENST00000561330 ESPNB1AK53 854 aa9.7□□□□□ -0.86
USP8-218ENST00000561330 RAB15P59190 212 aa9.7□□□□□ -0.86
USP8-218ENST00000561330 INTS6LQ5JSJ4 861 aaKnown RBP9.7□□□□□ -0.86
USP8-218ENST00000561330 RNF20Q5VTR2 975 aa9.7□□□□□ -0.86
USP8-218ENST00000561330 HPS1Q92902 700 aa9.7□□□□□ -0.86
USP8-218ENST00000561330 NR3C2P08235 984 aa9.69□□□□□ -0.86
USP8-218ENST00000561330 DHX9Q08211 1270 aaKnown RBP9.69□□□□□ -0.86
USP8-218ENST00000561330 SEPT12Q8IYM1 358 aa9.69□□□□□ -0.86
USP8-218ENST00000561330 CCDC116Q8IYX3 515 aa9.69□□□□□ -0.86
USP8-218ENST00000561330 AVPP01185 164 aa9.68□□□□□ -0.86
USP8-218ENST00000561330 ALG2Q9H553 416 aa9.68□□□□□ -0.86
USP8-218ENST00000561330 SLFNL1Q499Z3 407 aa9.67□□□□□ -0.86
USP8-218ENST00000561330 PPP1R26Q5T8A7 1209 aaPredicted RBP9.67□□□□□ -0.86
USP8-218ENST00000561330 HDGFL1Q5TGJ6 251 aa9.67□□□□□ -0.86
USP8-218ENST00000561330 Q6ZNB5 142 aa9.67□□□□□ -0.86
USP8-218ENST00000561330 CCDC125Q86Z20 511 aa9.67□□□□□ -0.86
USP8-218ENST00000561330 EMILIN1Q9Y6C2 1016 aa9.67□□□□□ -0.86
USP8-218ENST00000561330 WDR4P57081 412 aaKnown RBP9.66□□□□□ -0.86
USP8-218ENST00000561330 ZNF777Q9ULD5 760 aaPredicted RBP9.66□□□□□ -0.86
USP8-218ENST00000561330 ERVH48-1M5A8F1 160 aa9.65□□□□□ -0.86
USP8-218ENST00000561330 CTC1Q2NKJ3 1217 aa9.65□□□□□ -0.86
USP8-218ENST00000561330 RNF135Q8IUD6 432 aa9.65□□□□□ -0.86
USP8-218ENST00000561330 ADAMTS19Q8TE59 1207 aa9.65□□□□□ -0.86
USP8-218ENST00000561330 PGPEP1Q9NXJ5 209 aa9.65□□□□□ -0.86
USP8-218ENST00000561330 ZIC2O95409 532 aaPredicted RBP9.64□□□□□ -0.87
USP8-218ENST00000561330 MYT1Q01538 1121 aa9.64□□□□□ -0.87
USP8-218ENST00000561330 GLMNQ92990 594 aa9.64□□□□□ -0.87
USP8-218ENST00000561330 TRIM52Q96A61 297 aa9.64□□□□□ -0.87
USP8-218ENST00000561330 KLF16Q9BXK1 252 aaPredicted RBP9.64□□□□□ -0.87
USP8-218ENST00000561330 CAPN5O15484 640 aaPredicted RBP9.63□□□□□ -0.87
USP8-218ENST00000561330 TIMP2P16035 220 aa9.63□□□□□ -0.87
USP8-218ENST00000561330 SMCPP49901 116 aaPredicted RBP9.63□□□□□ -0.87
USP8-218ENST00000561330 PHTF2Q8N3S3 785 aa9.63□□□□□ -0.87
USP8-218ENST00000561330 ITPKCQ96DU7 683 aa9.63□□□□□ -0.87
USP8-218ENST00000561330 CALR3Q96L12 384 aaKnown RBP9.63□□□□□ -0.87
USP8-218ENST00000561330 TIMELESSQ9UNS1 1208 aa9.63□□□□□ -0.87
USP8-218ENST00000561330 AXIN1O15169 862 aa9.62□□□□□ -0.87
USP8-218ENST00000561330 CRIPAKQ8N1N5 446 aa9.62□□□□□ -0.87
USP8-218ENST00000561330 ZFAND3Q9H8U3 227 aa9.62□□□□□ -0.87
USP8-218ENST00000561330 PCDHB11Q9Y5F2 797 aa9.62□□□□□ -0.87
USP8-218ENST00000561330 TRAF7Q6Q0C0 670 aa9.61□□□□□ -0.87
USP8-218ENST00000561330 TMPRSS4Q9NRS4 437 aa9.61□□□□□ -0.87
USP8-218ENST00000561330 ZNF784Q8NCA9 323 aaPredicted RBP9.6□□□□□ -0.87
USP8-218ENST00000561330 CCDC85AQ96PX6 553 aaPredicted RBP9.6□□□□□ -0.87
USP8-218ENST00000561330 DOLKQ9UPQ8 538 aa9.6□□□□□ -0.87
USP8-218ENST00000561330 PIK3CDO00329 1044 aa9.59□□□□□ -0.87
USP8-218ENST00000561330 ST8SIA5O15466 376 aa9.59□□□□□ -0.87
USP8-218ENST00000561330 NFATC2IPQ8NCF5 419 aa9.59□□□□□ -0.87
USP8-218ENST00000561330 AAASQ9NRG9 546 aa9.59□□□□□ -0.87
USP8-218ENST00000561330 SKIP12755 728 aa9.58□□□□□ -0.88
USP8-218ENST00000561330 MAP7D1Q3KQU3 841 aa9.58□□□□□ -0.88
USP8-218ENST00000561330 ESF1Q9H501 851 aaKnown RBP9.58□□□□□ -0.88
USP8-218ENST00000561330 CYLDQ9NQC7 956 aa9.58□□□□□ -0.88
USP8-218ENST00000561330 LILRA1O75019 489 aa9.57□□□□□ -0.88
USP8-218ENST00000561330 TSGA10IPQ3SY00 556 aa9.57□□□□□ -0.88
USP8-218ENST00000561330 PLPP7Q8NBV4 271 aa9.57□□□□□ -0.88
USP8-218ENST00000561330 CHIC2Q9UKJ5 165 aa9.57□□□□□ -0.88
USP8-218ENST00000561330 ERVK-9P63128 1117 aa9.56□□□□□ -0.88
USP8-218ENST00000561330 CBLBQ13191 982 aa9.56□□□□□ -0.88
USP8-218ENST00000561330 CC2D2BQ6DHV5 1058 aa9.56□□□□□ -0.88
USP8-218ENST00000561330 UCN2Q96RP3 112 aa9.56□□□□□ -0.88
USP8-218ENST00000561330 MYCP01106 439 aaPredicted RBP9.55□□□□□ -0.88
USP8-218ENST00000561330 ADD1P35611 737 aaKnown RBP9.55□□□□□ -0.88
USP8-218ENST00000561330 OXLD1Q5BKU9 147 aa9.55□□□□□ -0.88
USP8-218ENST00000561330 Q6ZVU0 165 aa9.55□□□□□ -0.88
USP8-218ENST00000561330 CDCA7Q9BWT1 371 aaPredicted RBP9.55□□□□□ -0.88
USP8-218ENST00000561330 ARID3CA6NKF2 412 aa9.54□□□□□ -0.88
USP8-218ENST00000561330 SCTRP47872 440 aa9.54□□□□□ -0.88
USP8-218ENST00000561330 USP4Q13107 963 aa9.54□□□□□ -0.88
USP8-218ENST00000561330 TBC1D9Q6ZT07 1266 aa9.54□□□□□ -0.88
USP8-218ENST00000561330 MEIOBQ8N635 442 aa9.54□□□□□ -0.88
USP8-218ENST00000561330 SIRT1Q96EB6 747 aa9.54□□□□□ -0.88
USP8-218ENST00000561330 LCE2BO14633 110 aa9.53□□□□□ -0.88
USP8-218ENST00000561330 ATP9BO43861 1147 aa9.53□□□□□ -0.88
USP8-218ENST00000561330 LZTS3O60299 673 aaPredicted RBP9.53□□□□□ -0.88
USP8-218ENST00000561330 UPP2O95045 317 aa9.53□□□□□ -0.88
USP8-218ENST00000561330 TFIP11Q9UBB9 837 aaKnown RBP9.53□□□□□ -0.88
USP8-218ENST00000561330 USP17L5A8MUK1 530 aa9.52□□□□□ -0.89
USP8-218ENST00000561330 ADH1AP07327 375 aa9.52□□□□□ -0.89
USP8-218ENST00000561330 BMP1P13497 986 aa9.52□□□□□ -0.89
USP8-218ENST00000561330 SCARF1Q14162 830 aa9.52□□□□□ -0.89
USP8-218ENST00000561330 MRPL14Q6P1L8 145 aaKnown RBP9.52□□□□□ -0.89
USP8-218ENST00000561330 TSEN34Q9BSV6 310 aaKnown RBP9.52□□□□□ -0.89
USP8-218ENST00000561330 PPP1R12CQ9BZL4 782 aa9.52□□□□□ -0.89
USP8-218ENST00000561330 ATP13A2Q9NQ11 1180 aa9.52□□□□□ -0.89
USP8-218ENST00000561330 DACH1Q9UI36 760 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms