RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	F12	P00748	615 aa	Predicted RBP	11.68	□□□□□ -0.54
MARK3-223	ENST00000561071	CCNYL3	P0C7X3	344 aa		11.68	□□□□□ -0.54
MARK3-223	ENST00000561071	UBTF	P17480	764 aa	Known RBP	11.68	□□□□□ -0.54
MARK3-223	ENST00000561071	NR6A1	Q15406	480 aa		11.68	□□□□□ -0.54
MARK3-223	ENST00000561071	PPP1R18	Q6NYC8	613 aa		11.68	□□□□□ -0.54
MARK3-223	ENST00000561071	CCDC24	Q8N4L8	307 aa		11.68	□□□□□ -0.54
MARK3-223	ENST00000561071	POM121	Q96HA1	1249 aa		11.68	□□□□□ -0.54
MARK3-223	ENST00000561071	PLA2G2E	Q9NZK7	142 aa		11.68	□□□□□ -0.54
MARK3-223	ENST00000561071	FCF1	Q9Y324	198 aa	Known RBP	11.68	□□□□□ -0.54
MARK3-223	ENST00000561071	ATP10B	O94823	1461 aa		11.68	□□□□□ -0.54
MARK3-223	ENST00000561071	RNF223	E7ERA6	249 aa		11.67	□□□□□ -0.54
MARK3-223	ENST00000561071	CLUAP1	Q96AJ1	413 aa		11.67	□□□□□ -0.54
MARK3-223	ENST00000561071	CD109	Q6YHK3	1445 aa		11.67	□□□□□ -0.54
MARK3-223	ENST00000561071	TEX14	Q8IWB6	1497 aa		11.66	□□□□□ -0.54
MARK3-223	ENST00000561071	CTH	P32929	405 aa		11.66	□□□□□ -0.54
MARK3-223	ENST00000561071	EVA1B	Q9NVM1	165 aa		11.66	□□□□□ -0.54
MARK3-223	ENST00000561071	EEA1	Q15075	1411 aa		11.66	□□□□□ -0.54
MARK3-223	ENST00000561071	SAMD9	Q5K651	1589 aa		11.65	□□□□□ -0.54
MARK3-223	ENST00000561071	FHOD3	Q2V2M9	1422 aa		11.64	□□□□□ -0.55
MARK3-223	ENST00000561071	SOCS7	O14512	581 aa		11.64	□□□□□ -0.55
MARK3-223	ENST00000561071	KCNH2	Q12809	1159 aa		11.64	□□□□□ -0.55
MARK3-223	ENST00000561071	IFFO2	Q5TF58	517 aa		11.64	□□□□□ -0.55
MARK3-223	ENST00000561071	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.64	□□□□□ -0.55
MARK3-223	ENST00000561071	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.64	□□□□□ -0.55
MARK3-223	ENST00000561071	TBC1D2B	Q9UPU7	963 aa		11.64	□□□□□ -0.55
MARK3-223	ENST00000561071	COG6	Q9Y2V7	657 aa		11.64	□□□□□ -0.55
MARK3-223	ENST00000561071	GDPD2	Q9HCC8	539 aa		11.63	□□□□□ -0.55
MARK3-223	ENST00000561071	MAGI3	Q5TCQ9	1506 aa		11.62	□□□□□ -0.55
MARK3-223	ENST00000561071	GGCX	P38435	758 aa		11.62	□□□□□ -0.55
MARK3-223	ENST00000561071	PLA2G2C	Q5R387	149 aa		11.62	□□□□□ -0.55
MARK3-223	ENST00000561071	ADGRL1	O94910	1474 aa		11.61	□□□□□ -0.55
MARK3-223	ENST00000561071	CFAP43	Q8NDM7	1665 aa		11.6	□□□□□ -0.55
MARK3-223	ENST00000561071	APBB1	O00213	710 aa		11.6	□□□□□ -0.55
MARK3-223	ENST00000561071	GPR37L1	O60883	481 aa		11.6	□□□□□ -0.55
MARK3-223	ENST00000561071	ANKLE1	Q8NAG6	615 aa		11.6	□□□□□ -0.55
MARK3-223	ENST00000561071	NDUFB9	Q9Y6M9	179 aa		11.6	□□□□□ -0.55
MARK3-223	ENST00000561071	RAPGEF6	Q8TEU7	1601 aa		11.6	□□□□□ -0.55
MARK3-223	ENST00000561071	NUP153	P49790	1475 aa	Known RBP	11.59	□□□□□ -0.55
MARK3-223	ENST00000561071	ZMYND15	Q9H091	742 aa		11.59	□□□□□ -0.55
MARK3-223	ENST00000561071	UNC93B1	Q9H1C4	597 aa		11.59	□□□□□ -0.55
MARK3-223	ENST00000561071	RAD21	O60216	631 aa		11.58	□□□□□ -0.56
MARK3-223	ENST00000561071	ABL2	P42684	1182 aa		11.58	□□□□□ -0.56
MARK3-223	ENST00000561071	ERICH6	Q7L0X2	663 aa		11.57	□□□□□ -0.56
MARK3-223	ENST00000561071	KIF21B	O75037	1637 aa		11.57	□□□□□ -0.56
MARK3-223	ENST00000561071		A0A0G2JS52	829 aa		11.56	□□□□□ -0.56
MARK3-223	ENST00000561071	RAPGEF3	O95398	923 aa		11.56	□□□□□ -0.56
MARK3-223	ENST00000561071	PRM3	Q9NNZ6	103 aa		11.56	□□□□□ -0.56
MARK3-223	ENST00000561071	FKBPL	Q9UIM3	349 aa		11.56	□□□□□ -0.56
MARK3-223	ENST00000561071	PLEKHD1	A6NEE1	506 aa		11.55	□□□□□ -0.56
MARK3-223	ENST00000561071	ABCA9	Q8IUA7	1624 aa		11.54	□□□□□ -0.56
MARK3-223	ENST00000561071		A6NJR5	290 aa		11.54	□□□□□ -0.56
MARK3-223	ENST00000561071	IRF5	Q13568	498 aa		11.54	□□□□□ -0.56
MARK3-223	ENST00000561071	EMID1	Q96A84	441 aa	Predicted RBP	11.54	□□□□□ -0.56
MARK3-223	ENST00000561071	ARAP3	Q8WWN8	1544 aa		11.53	□□□□□ -0.56
MARK3-223	ENST00000561071	EFCAB5	A4FU69	1503 aa		11.52	□□□□□ -0.57
MARK3-223	ENST00000561071	ZBTB24	O43167	697 aa	Predicted RBP	11.52	□□□□□ -0.57
MARK3-223	ENST00000561071	LINC01559	Q495D7	138 aa		11.52	□□□□□ -0.57
MARK3-223	ENST00000561071	PROSER2	Q86WR7	435 aa	Predicted RBP	11.52	□□□□□ -0.57
MARK3-223	ENST00000561071	BAP1	Q92560	729 aa		11.52	□□□□□ -0.57
MARK3-223	ENST00000561071	LIAT1	Q6ZQX7	453 aa		11.51	□□□□□ -0.57
MARK3-223	ENST00000561071	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.51	□□□□□ -0.57
MARK3-223	ENST00000561071	CDK13	Q14004	1512 aa	Known RBP	11.5	□□□□□ -0.57
MARK3-223	ENST00000561071	PNMA1	Q8ND90	353 aa		11.5	□□□□□ -0.57
MARK3-223	ENST00000561071	ARMC2	Q8NEN0	867 aa		11.5	□□□□□ -0.57
MARK3-223	ENST00000561071	TRIM32	Q13049	653 aa		11.49	□□□□□ -0.57
MARK3-223	ENST00000561071	PHLDB1	Q86UU1	1377 aa		11.49	□□□□□ -0.57
MARK3-223	ENST00000561071	ARHGAP35	Q9NRY4	1499 aa		11.49	□□□□□ -0.57
MARK3-223	ENST00000561071	NBPF14	Q5TI25	921 aa		11.48	□□□□□ -0.57
MARK3-223	ENST00000561071	NEO1	Q92859	1461 aa		11.48	□□□□□ -0.57
MARK3-223	ENST00000561071	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
MARK3-223	ENST00000561071	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.47	□□□□□ -0.57
MARK3-223	ENST00000561071	TRAK2	O60296	914 aa		11.47	□□□□□ -0.57
MARK3-223	ENST00000561071	ZNF511	Q8NB15	262 aa		11.47	□□□□□ -0.57
MARK3-223	ENST00000561071	AKNA	Q7Z591	1439 aa		11.46	□□□□□ -0.57
MARK3-223	ENST00000561071	SLC19A1	P41440	591 aa		11.46	□□□□□ -0.57
MARK3-223	ENST00000561071	RPIA	P49247	311 aa		11.46	□□□□□ -0.57
MARK3-223	ENST00000561071	SH3BP2	P78314	561 aa		11.46	□□□□□ -0.57
MARK3-223	ENST00000561071	SKOR1	P84550	965 aa		11.46	□□□□□ -0.57
MARK3-223	ENST00000561071	VAC14	Q08AM6	782 aa		11.46	□□□□□ -0.57
MARK3-223	ENST00000561071	PDXDC2P	Q6P474	469 aa		11.46	□□□□□ -0.57
MARK3-223	ENST00000561071	FOXJ1	Q92949	421 aa		11.46	□□□□□ -0.57
MARK3-223	ENST00000561071	OCSTAMP	Q9BR26	566 aa		11.46	□□□□□ -0.57
MARK3-223	ENST00000561071	TTC37	Q6PGP7	1564 aa		11.45	□□□□□ -0.58
MARK3-223	ENST00000561071	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.45	□□□□□ -0.58
MARK3-223	ENST00000561071	FBXO45	P0C2W1	286 aa		11.45	□□□□□ -0.58
MARK3-223	ENST00000561071	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.45	□□□□□ -0.58	2e-6	■■□□□ 11.9
MARK3-223	ENST00000561071	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.45	□□□□□ -0.58
MARK3-223	ENST00000561071	FRMPD1	Q5SYB0	1578 aa		11.45	□□□□□ -0.58
MARK3-223	ENST00000561071	FANCA	O15360	1455 aa		11.44	□□□□□ -0.58
MARK3-223	ENST00000561071	FMN1	Q68DA7	1419 aa		11.44	□□□□□ -0.58
MARK3-223	ENST00000561071	POM121C	A8CG34	1229 aa		11.44	□□□□□ -0.58
MARK3-223	ENST00000561071	SH3BP5L	Q7L8J4	393 aa		11.44	□□□□□ -0.58
MARK3-223	ENST00000561071	DENND4B	O75064	1496 aa	Predicted RBP	11.44	□□□□□ -0.58
MARK3-223	ENST00000561071	ZBBX	A8MT70	800 aa		11.43	□□□□□ -0.58
MARK3-223	ENST00000561071	C4orf48	Q5BLP8	95 aa		11.43	□□□□□ -0.58
MARK3-223	ENST00000561071	WWC1	Q8IX03	1113 aa		11.43	□□□□□ -0.58
MARK3-223	ENST00000561071	MAGEB6P1	A0A0J9YX57	407 aa		11.42	□□□□□ -0.58
MARK3-223	ENST00000561071	CD2BP2	O95400	341 aa	Known RBP	11.42	□□□□□ -0.58
MARK3-223	ENST00000561071	PTK2	Q05397	1052 aa		11.42	□□□□□ -0.58
MARK3-223	ENST00000561071	AGER	Q15109	404 aa		11.42	□□□□□ -0.58

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