RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 SF3B2Q13435 895 aaKnown RBP12.41□□□□□ -0.42
SNRPA1-214ENST00000560987 PIK3C2AO00443 1686 aa12.41□□□□□ -0.42
SNRPA1-214ENST00000560987 PHRF1Q9P1Y6 1649 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-214ENST00000560987 MON2Q7Z3U7 1717 aa12.4□□□□□ -0.42
SNRPA1-214ENST00000560987 FBLN1P23142 703 aa12.4□□□□□ -0.42
SNRPA1-214ENST00000560987 AMPHP49418 695 aa12.4□□□□□ -0.42
SNRPA1-214ENST00000560987 LARP1Q6PKG0 1096 aaKnown RBP12.4□□□□□ -0.42
SNRPA1-214ENST00000560987 TOM1L2Q6ZVM7 507 aa12.4□□□□□ -0.42
SNRPA1-214ENST00000560987 SEPT12Q8IYM1 358 aa12.4□□□□□ -0.42
SNRPA1-214ENST00000560987 AXIN2Q9Y2T1 843 aa12.4□□□□□ -0.42
SNRPA1-214ENST00000560987 CPDO75976 1380 aa12.4□□□□□ -0.42
SNRPA1-214ENST00000560987 USP31Q70CQ4 1352 aa12.4□□□□□ -0.42
SNRPA1-214ENST00000560987 SPATA31A5Q5VU36 1347 aa12.39□□□□□ -0.43
SNRPA1-214ENST00000560987 SPATA31A7Q8IWB4 1347 aa12.39□□□□□ -0.43
SNRPA1-214ENST00000560987 PLCH1Q4KWH8 1693 aa12.39□□□□□ -0.43
SNRPA1-214ENST00000560987 KNSTRNQ9Y448 316 aa12.39□□□□□ -0.43
SNRPA1-214ENST00000560987 CGNL1Q0VF96 1302 aa12.38□□□□□ -0.43
SNRPA1-214ENST00000560987 CRYBG1Q9Y4K1 1723 aa12.38□□□□□ -0.43
SNRPA1-214ENST00000560987 CHRDL2Q6WN34 429 aa12.38□□□□□ -0.43
SNRPA1-214ENST00000560987 LTV1Q96GA3 475 aaPredicted RBP12.38□□□□□ -0.43
SNRPA1-214ENST00000560987 ZNF219Q9P2Y4 722 aaPredicted RBP12.38□□□□□ -0.43
SNRPA1-214ENST00000560987 AATKQ6ZMQ8 1374 aa12.38□□□□□ -0.43
SNRPA1-214ENST00000560987 KIF7Q2M1P5 1343 aa12.37□□□□□ -0.43
SNRPA1-214ENST00000560987 SPATA31A1Q5TZJ5 1347 aa12.37□□□□□ -0.43
SNRPA1-214ENST00000560987 NSD3Q9BZ95 1437 aa12.37□□□□□ -0.43
SNRPA1-214ENST00000560987 NWD2Q9ULI1 1742 aa12.37□□□□□ -0.43
SNRPA1-214ENST00000560987 PPM1GO15355 546 aaPredicted RBP12.37□□□□□ -0.43
SNRPA1-214ENST00000560987 ZEB1P37275 1124 aaPredicted RBP12.37□□□□□ -0.43
SNRPA1-214ENST00000560987 TNNT2P45379 298 aaPredicted RBP12.37□□□□□ -0.43
SNRPA1-214ENST00000560987 CNGB1Q14028 1251 aaPredicted RBP12.37□□□□□ -0.43
SNRPA1-214ENST00000560987 TCP11L2Q8N4U5 519 aa12.37□□□□□ -0.43
SNRPA1-214ENST00000560987 NRKQ7Z2Y5 1582 aa12.37□□□□□ -0.43
SNRPA1-214ENST00000560987 SLIT3O75094 1523 aa12.37□□□□□ -0.43
SNRPA1-214ENST00000560987 CAMTA1Q9Y6Y1 1673 aa12.36□□□□□ -0.43
SNRPA1-214ENST00000560987 ONECUT3O60422 494 aaPredicted RBP12.36□□□□□ -0.43
SNRPA1-214ENST00000560987 RRS1Q15050 365 aaKnown RBP12.36□□□□□ -0.43
SNRPA1-214ENST00000560987 KRT27Q7Z3Y8 459 aa12.36□□□□□ -0.43
SNRPA1-214ENST00000560987 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
SNRPA1-214ENST00000560987 NLRP2Q9NX02 1062 aa12.36□□□□□ -0.43
SNRPA1-214ENST00000560987 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.35□□□□□ -0.43
SNRPA1-214ENST00000560987 PDE3BQ13370 1112 aa12.35□□□□□ -0.43
SNRPA1-214ENST00000560987 ANKRD24Q8TF21 1146 aa12.35□□□□□ -0.43
SNRPA1-214ENST00000560987 IP6K1Q92551 441 aa12.35□□□□□ -0.43
SNRPA1-214ENST00000560987 MORC1Q86VD1 984 aa12.34□□□□□ -0.43
SNRPA1-214ENST00000560987 THRAP3Q9Y2W1 955 aaKnown RBP12.34□□□□□ -0.43
SNRPA1-214ENST00000560987 WDR17Q8IZU2 1322 aa12.34□□□□□ -0.43
SNRPA1-214ENST00000560987 SP7Q8TDD2 431 aaPredicted RBP12.33□□□□□ -0.44
SNRPA1-214ENST00000560987 GLI3P10071 1580 aa12.33□□□□□ -0.44
SNRPA1-214ENST00000560987 MAP3K19Q56UN5 1328 aa12.33□□□□□ -0.44
SNRPA1-214ENST00000560987 MYOM1P52179 1685 aa12.32□□□□□ -0.44
SNRPA1-214ENST00000560987 CCDC7Q96M83 1385 aa12.32□□□□□ -0.44
SNRPA1-214ENST00000560987 OVOS2A0A0J9YW53 1432 aa12.32□□□□□ -0.44
SNRPA1-214ENST00000560987 OVOS2Q6IE36 1432 aa12.32□□□□□ -0.44
SNRPA1-214ENST00000560987 HOXC9P31274 260 aa12.32□□□□□ -0.44
SNRPA1-214ENST00000560987 FAM182BQ5T319 152 aa12.32□□□□□ -0.44
SNRPA1-214ENST00000560987 BARGINQ6ZT62 677 aa12.32□□□□□ -0.44
SNRPA1-214ENST00000560987 CARD10Q9BWT7 1032 aa12.32□□□□□ -0.44
SNRPA1-214ENST00000560987 RGPD5Q99666 1765 aa12.32□□□□□ -0.44
SNRPA1-214ENST00000560987 COL5A2P05997 1499 aaPredicted RBP12.32□□□□□ -0.44
SNRPA1-214ENST00000560987 WASHC2AQ641Q2 1341 aa12.32□□□□□ -0.44
SNRPA1-214ENST00000560987 NRAPQ86VF7 1730 aa12.31□□□□□ -0.44
SNRPA1-214ENST00000560987 CRB1P82279 1406 aa12.31□□□□□ -0.44
SNRPA1-214ENST00000560987 NFAT5O94916 1531 aa12.31□□□□□ -0.44
SNRPA1-214ENST00000560987 BLMP54132 1417 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-214ENST00000560987 EXOC5O00471 708 aa12.3□□□□□ -0.44
SNRPA1-214ENST00000560987 CC2D1BQ5T0F9 858 aaKnown RBP12.3□□□□□ -0.44
SNRPA1-214ENST00000560987 EMILIN1Q9Y6C2 1016 aa12.3□□□□□ -0.44
SNRPA1-214ENST00000560987 KIF20BQ96Q89 1820 aa12.3□□□□□ -0.44
SNRPA1-214ENST00000560987 LMO7Q8WWI1 1683 aa12.29□□□□□ -0.44
SNRPA1-214ENST00000560987 LTN1O94822 1766 aa12.29□□□□□ -0.44
SNRPA1-214ENST00000560987 COL18A1P39060 1754 aa12.29□□□□□ -0.44
SNRPA1-214ENST00000560987 BAG6P46379 1132 aa12.29□□□□□ -0.44
SNRPA1-214ENST00000560987 DDB1Q16531 1140 aa12.29□□□□□ -0.44
SNRPA1-214ENST00000560987 HSP90AB2PQ58FF8 381 aa12.29□□□□□ -0.44
SNRPA1-214ENST00000560987 CDCA7Q9BWT1 371 aaPredicted RBP12.28□□□□□ -0.44
SNRPA1-214ENST00000560987 ERBB3P21860 1342 aa12.28□□□□□ -0.44
SNRPA1-214ENST00000560987 POLKQ9UBT6 870 aa12.27□□□□□ -0.45
SNRPA1-214ENST00000560987 BRWD3Q6RI45 1802 aa12.27□□□□□ -0.45
SNRPA1-214ENST00000560987 USP54Q70EL1 1684 aa12.26□□□□□ -0.45
SNRPA1-214ENST00000560987 PER1O15534 1290 aaPredicted RBP12.26□□□□□ -0.45
SNRPA1-214ENST00000560987 IL2RBP14784 551 aa12.26□□□□□ -0.45
SNRPA1-214ENST00000560987 FAM196AQ6ZSG2 479 aa12.26□□□□□ -0.45
SNRPA1-214ENST00000560987 DEFB132Q7Z7B7 95 aa12.26□□□□□ -0.45
SNRPA1-214ENST00000560987 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
SNRPA1-214ENST00000560987 NBPF6Q5VWK0 638 aa12.25□□□□□ -0.45
SNRPA1-214ENST00000560987 USHBP1Q8N6Y0 703 aa12.25□□□□□ -0.45
SNRPA1-214ENST00000560987 NBPF4Q96M43 638 aa12.25□□□□□ -0.45
SNRPA1-214ENST00000560987 NSD2O96028 1365 aa12.25□□□□□ -0.45
SNRPA1-214ENST00000560987 SMG6Q86US8 1419 aaKnown RBP12.25□□□□□ -0.45
SNRPA1-214ENST00000560987 MAP2P11137 1827 aaKnown RBP12.25□□□□□ -0.45
SNRPA1-214ENST00000560987 TRIM37O94972 964 aa12.24□□□□□ -0.45
SNRPA1-214ENST00000560987 INSRP06213 1382 aa12.24□□□□□ -0.45
SNRPA1-214ENST00000560987 FLT4P35916 1363 aa12.24□□□□□ -0.45
SNRPA1-214ENST00000560987 DDX54Q8TDD1 881 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-214ENST00000560987 RTL1A6NKG5 1358 aa12.23□□□□□ -0.45
SNRPA1-214ENST00000560987 DDX10Q13206 875 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-214ENST00000560987 RAPGEF4Q8WZA2 1011 aa12.23□□□□□ -0.45
SNRPA1-214ENST00000560987 ABCC6O95255 1503 aa12.22□□□□□ -0.45
SNRPA1-214ENST00000560987 KIF24Q5T7B8 1368 aa12.22□□□□□ -0.45
SNRPA1-214ENST00000560987 TATP17735 454 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms