RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 GGNBP2Q9H3C7 697 aa16.76■□□□□ 0.27
USP8-212ENST00000560730 NSD3Q9BZ95 1437 aa16.76■□□□□ 0.27
USP8-212ENST00000560730 COL5A2P05997 1499 aaPredicted RBP16.75■□□□□ 0.27
USP8-212ENST00000560730 ONECUT3O60422 494 aaPredicted RBP16.75■□□□□ 0.27
USP8-212ENST00000560730 FAM98CQ17RN3 349 aaKnown RBP16.75■□□□□ 0.27
USP8-212ENST00000560730 COG3Q96JB2 828 aa16.75■□□□□ 0.27
USP8-212ENST00000560730 SPATA31A1Q5TZJ5 1347 aa16.75■□□□□ 0.27
USP8-212ENST00000560730 SEPT12Q8IYM1 358 aa16.74■□□□□ 0.27
USP8-212ENST00000560730 KIF7Q2M1P5 1343 aa16.74■□□□□ 0.27
USP8-212ENST00000560730 PANK3Q9H999 370 aa16.73■□□□□ 0.27
USP8-212ENST00000560730 USP35Q9P2H5 1018 aa16.73■□□□□ 0.27
USP8-212ENST00000560730 A0A0G2JS52 829 aa16.7■□□□□ 0.26
USP8-212ENST00000560730 MYT1Q01538 1121 aa16.7■□□□□ 0.26
USP8-212ENST00000560730 UPF1Q92900 1129 aaKnown RBP eCLIP16.7■□□□□ 0.26
USP8-212ENST00000560730 THSD7AQ9UPZ6 1657 aa16.69■□□□□ 0.26
USP8-212ENST00000560730 MAP3K19Q56UN5 1328 aa16.69■□□□□ 0.26
USP8-212ENST00000560730 CRB1P82279 1406 aa16.68■□□□□ 0.26
USP8-212ENST00000560730 ABCC6O95255 1503 aa16.68■□□□□ 0.26
USP8-212ENST00000560730 RRS1Q15050 365 aaKnown RBP16.68■□□□□ 0.26
USP8-212ENST00000560730 TOM1L2Q6ZVM7 507 aa16.68■□□□□ 0.26
USP8-212ENST00000560730 TCP11L2Q8N4U5 519 aa16.68■□□□□ 0.26
USP8-212ENST00000560730 WDR17Q8IZU2 1322 aa16.68■□□□□ 0.26
USP8-212ENST00000560730 BARGINQ6ZT62 677 aa16.67■□□□□ 0.26
USP8-212ENST00000560730 CGNL1Q0VF96 1302 aa16.67■□□□□ 0.26
USP8-212ENST00000560730 CCDC7Q96M83 1385 aa16.67■□□□□ 0.26
USP8-212ENST00000560730 CSB-PGBD3P0DP91 1061 aa16.66■□□□□ 0.26
USP8-212ENST00000560730 KRT27Q7Z3Y8 459 aa16.66■□□□□ 0.26
USP8-212ENST00000560730 IP6K1Q92551 441 aa16.66■□□□□ 0.26
USP8-212ENST00000560730 WASHC2AQ641Q2 1341 aa16.66■□□□□ 0.26
USP8-212ENST00000560730 MAP2P11137 1827 aaKnown RBP16.65■□□□□ 0.26
USP8-212ENST00000560730 ANKRD26Q9UPS8 1709 aa16.65■□□□□ 0.26
USP8-212ENST00000560730 ERBB3P21860 1342 aa16.64■□□□□ 0.25
USP8-212ENST00000560730 HOXC9P31274 260 aa16.64■□□□□ 0.25
USP8-212ENST00000560730 AMPHP49418 695 aa16.64■□□□□ 0.25
USP8-212ENST00000560730 FAM182BQ5T319 152 aa16.64■□□□□ 0.25
USP8-212ENST00000560730 ANKRD24Q8TF21 1146 aa16.64■□□□□ 0.25
USP8-212ENST00000560730 THRAP3Q9Y2W1 955 aaKnown RBP16.64■□□□□ 0.25
USP8-212ENST00000560730 CARD10Q9BWT7 1032 aa16.63■□□□□ 0.25
USP8-212ENST00000560730 PEAK1Q9H792 1746 aa16.63■□□□□ 0.25
USP8-212ENST00000560730 WNK3Q9BYP7 1800 aa16.63■□□□□ 0.25
USP8-212ENST00000560730 RGPD2P0DJD1 1756 aa16.63■□□□□ 0.25
USP8-212ENST00000560730 LTV1Q96GA3 475 aaPredicted RBP16.62■□□□□ 0.25
USP8-212ENST00000560730 BLMP54132 1417 aaPredicted RBP16.62■□□□□ 0.25
USP8-212ENST00000560730 NLRP2Q9NX02 1062 aa16.62■□□□□ 0.25
USP8-212ENST00000560730 EMILIN1Q9Y6C2 1016 aa16.62■□□□□ 0.25
USP8-212ENST00000560730 PARP4Q9UKK3 1724 aaKnown RBP16.61■□□□□ 0.25
USP8-212ENST00000560730 TNNT2P45379 298 aaPredicted RBP16.61■□□□□ 0.25
USP8-212ENST00000560730 KNSTRNQ9Y448 316 aa16.61■□□□□ 0.25
USP8-212ENST00000560730 PER1O15534 1290 aaPredicted RBP16.6■□□□□ 0.25
USP8-212ENST00000560730 EP400Q96L91 3159 aa16.6■□□□□ 0.25
USP8-212ENST00000560730 RTL1A6NKG5 1358 aa16.59■□□□□ 0.25
USP8-212ENST00000560730 HSP90AB2PQ58FF8 381 aa16.59■□□□□ 0.25
USP8-212ENST00000560730 AMER1Q5JTC6 1135 aaPredicted RBP16.59■□□□□ 0.25
USP8-212ENST00000560730 DISP2A7MBM2 1401 aa16.58■□□□□ 0.24
USP8-212ENST00000560730 LRRC37A3O60309 1634 aa16.57■□□□□ 0.24
USP8-212ENST00000560730 PPM1GO15355 546 aaPredicted RBP16.57■□□□□ 0.24
USP8-212ENST00000560730 PDE3BQ13370 1112 aa16.57■□□□□ 0.24
USP8-212ENST00000560730 POLKQ9UBT6 870 aa16.57■□□□□ 0.24
USP8-212ENST00000560730 FAM208AQ9UK61 1670 aaKnown RBP16.56■□□□□ 0.24
USP8-212ENST00000560730 NSD2O96028 1365 aa16.56■□□□□ 0.24
USP8-212ENST00000560730 FLT4P35916 1363 aa16.56■□□□□ 0.24
USP8-212ENST00000560730 MORC1Q86VD1 984 aa16.55■□□□□ 0.24
USP8-212ENST00000560730 INSRP06213 1382 aa16.55■□□□□ 0.24
USP8-212ENST00000560730 DDB1Q16531 1140 aa16.54■□□□□ 0.24
USP8-212ENST00000560730 NBPF6Q5VWK0 638 aa16.54■□□□□ 0.24
USP8-212ENST00000560730 NBPF4Q96M43 638 aa16.54■□□□□ 0.24
USP8-212ENST00000560730 KIF24Q5T7B8 1368 aa16.54■□□□□ 0.24
USP8-212ENST00000560730 CDCA7Q9BWT1 371 aaPredicted RBP16.53■□□□□ 0.24
USP8-212ENST00000560730 IL2RBP14784 551 aa16.53■□□□□ 0.24
USP8-212ENST00000560730 CC2D1BQ5T0F9 858 aaKnown RBP16.53■□□□□ 0.24
USP8-212ENST00000560730 CCDC125Q86Z20 511 aa16.53■□□□□ 0.24
USP8-212ENST00000560730 USHBP1Q8N6Y0 703 aa16.53■□□□□ 0.24
USP8-212ENST00000560730 MARCH10Q8NA82 808 aaPredicted RBP16.53■□□□□ 0.24
USP8-212ENST00000560730 CNGB1Q14028 1251 aaPredicted RBP16.52■□□□□ 0.23
USP8-212ENST00000560730 FAM196AQ6ZSG2 479 aa16.52■□□□□ 0.23
USP8-212ENST00000560730 SBF2Q86WG5 1849 aa16.51■□□□□ 0.23
USP8-212ENST00000560730 EXOC5O00471 708 aa16.51■□□□□ 0.23
USP8-212ENST00000560730 DEFB132Q7Z7B7 95 aa16.51■□□□□ 0.23
USP8-212ENST00000560730 SMG6Q86US8 1419 aaKnown RBP16.5■□□□□ 0.23
USP8-212ENST00000560730 TRIM37O94972 964 aa16.5■□□□□ 0.23
USP8-212ENST00000560730 KAT6BQ8WYB5 2073 aa16.5■□□□□ 0.23
USP8-212ENST00000560730 RGPD1P0DJD0 1748 aa16.49■□□□□ 0.23
USP8-212ENST00000560730 TNS1Q9HBL0 1735 aaKnown RBP16.49■□□□□ 0.23
USP8-212ENST00000560730 TNS2Q63HR2 1409 aa16.48■□□□□ 0.23
USP8-212ENST00000560730 ZEB1P37275 1124 aaPredicted RBP16.48■□□□□ 0.23
USP8-212ENST00000560730 MEGF6O75095 1541 aa16.48■□□□□ 0.23
USP8-212ENST00000560730 NPC1L1Q9UHC9 1359 aa16.48■□□□□ 0.23
USP8-212ENST00000560730 OVOS2A0A0G2JMS6 1433 aa16.48■□□□□ 0.23
USP8-212ENST00000560730 SF3B2Q13435 895 aaKnown RBP16.47■□□□□ 0.23
USP8-212ENST00000560730 EIF4A2Q14240 407 aaKnown RBP16.47■□□□□ 0.23
USP8-212ENST00000560730 PTF1AQ7RTS3 328 aa16.46■□□□□ 0.23
USP8-212ENST00000560730 EYA1Q99502 592 aa16.46■□□□□ 0.23
USP8-212ENST00000560730 SHANK3Q9BYB0 1731 aa16.45■□□□□ 0.22
USP8-212ENST00000560730 NCAPD2Q15021 1401 aa16.44■□□□□ 0.22
USP8-212ENST00000560730 MTHFSP49914 203 aa16.44■□□□□ 0.22
USP8-212ENST00000560730 EN1Q05925 392 aaPredicted RBP16.44■□□□□ 0.22
USP8-212ENST00000560730 DDX54Q8TDD1 881 aaKnown RBP16.44■□□□□ 0.22
USP8-212ENST00000560730 APBA3O96018 575 aa16.43■□□□□ 0.22
USP8-212ENST00000560730 BAG6P46379 1132 aa16.43■□□□□ 0.22
USP8-212ENST00000560730 ZCRB1Q8TBF4 217 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms