RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 STRCQ7RTU9 1775 aa14.22□□□□□ -0.13
SNRPA1-211ENST00000560433 BCAR3O75815 825 aa14.22□□□□□ -0.13
SNRPA1-211ENST00000560433 PHF23Q9BUL5 403 aaPredicted RBP14.22□□□□□ -0.13
SNRPA1-211ENST00000560433 EXOC6Q8TAG9 804 aa14.21□□□□□ -0.14
SNRPA1-211ENST00000560433 PPP4R2Q9NY27 417 aa14.2□□□□□ -0.14
SNRPA1-211ENST00000560433 LAS1LQ9Y4W2 734 aaKnown RBP14.2□□□□□ -0.14
SNRPA1-211ENST00000560433 C1orf167Q5SNV9 1468 aa14.19□□□□□ -0.14
SNRPA1-211ENST00000560433 FAM83GA6ND36 823 aa14.19□□□□□ -0.14
SNRPA1-211ENST00000560433 NEFMP07197 916 aa14.19□□□□□ -0.14
SNRPA1-211ENST00000560433 KRT28Q7Z3Y7 464 aa14.19□□□□□ -0.14
SNRPA1-211ENST00000560433 BCL2L13Q9BXK5 485 aa14.19□□□□□ -0.14
SNRPA1-211ENST00000560433 DCTN1Q14203 1278 aa14.19□□□□□ -0.14
SNRPA1-211ENST00000560433 CCDC27Q2M243 656 aa14.19□□□□□ -0.14
SNRPA1-211ENST00000560433 WDR63Q8IWG1 891 aa14.19□□□□□ -0.14
SNRPA1-211ENST00000560433 NGEFQ8N5V2 710 aa14.19□□□□□ -0.14
SNRPA1-211ENST00000560433 MARF1Q9Y4F3 1742 aaKnown RBP14.18□□□□□ -0.14
SNRPA1-211ENST00000560433 PNNQ9H307 717 aaKnown RBP14.17□□□□□ -0.14
SNRPA1-211ENST00000560433 HOXC9P31274 260 aa14.17□□□□□ -0.14
SNRPA1-211ENST00000560433 FLT4P35916 1363 aa14.16□□□□□ -0.14
SNRPA1-211ENST00000560433 NFE2L2Q16236 605 aa14.16□□□□□ -0.14
SNRPA1-211ENST00000560433 USHBP1Q8N6Y0 703 aa14.16□□□□□ -0.14
SNRPA1-211ENST00000560433 EYA1Q99502 592 aa14.16□□□□□ -0.14
SNRPA1-211ENST00000560433 SBNO1A3KN83 1393 aa14.16□□□□□ -0.14
SNRPA1-211ENST00000560433 MST1RQ04912 1400 aa14.16□□□□□ -0.14
SNRPA1-211ENST00000560433 CRBNQ96SW2 442 aa14.15□□□□□ -0.14
SNRPA1-211ENST00000560433 FANCIQ9NVI1 1328 aa14.15□□□□□ -0.14
SNRPA1-211ENST00000560433 MSH6P52701 1360 aa14.14□□□□□ -0.15
SNRPA1-211ENST00000560433 EXOSC9Q06265 439 aaKnown RBP14.14□□□□□ -0.15
SNRPA1-211ENST00000560433 CADPS2Q86UW7 1296 aa14.14□□□□□ -0.15
SNRPA1-211ENST00000560433 CABLES1Q8TDN4 633 aa14.14□□□□□ -0.15
SNRPA1-211ENST00000560433 FRAT1Q92837 279 aaPredicted RBP14.14□□□□□ -0.15
SNRPA1-211ENST00000560433 GCP02774 474 aa14.13□□□□□ -0.15
SNRPA1-211ENST00000560433 ERICH6BQ5W0A0 696 aa14.13□□□□□ -0.15
SNRPA1-211ENST00000560433 CCDC136Q96JN2 1154 aa14.13□□□□□ -0.15
SNRPA1-211ENST00000560433 MYH16Q9H6N6 1097 aa14.13□□□□□ -0.15
SNRPA1-211ENST00000560433 ZC3H6P61129 1189 aaKnown RBP14.13□□□□□ -0.15
SNRPA1-211ENST00000560433 XIRP1Q702N8 1843 aaKnown RBP14.13□□□□□ -0.15
SNRPA1-211ENST00000560433 MCM10Q7L590 875 aa14.12□□□□□ -0.15
SNRPA1-211ENST00000560433 TNNQ9UQP3 1299 aa14.12□□□□□ -0.15
SNRPA1-211ENST00000560433 ELL2O00472 640 aaPredicted RBP14.11□□□□□ -0.15
SNRPA1-211ENST00000560433 DLG5Q8TDM6 1919 aa14.11□□□□□ -0.15
SNRPA1-211ENST00000560433 LTN1O94822 1766 aa14.11□□□□□ -0.15
SNRPA1-211ENST00000560433 RARSP54136 660 aaKnown RBP14.11□□□□□ -0.15
SNRPA1-211ENST00000560433 LRRC59Q96AG4 307 aaKnown RBP14.11□□□□□ -0.15
SNRPA1-211ENST00000560433 CANXP27824 592 aaKnown RBP14.1□□□□□ -0.15
SNRPA1-211ENST00000560433 MTHFSDQ2M296 383 aaKnown RBP14.1□□□□□ -0.15
SNRPA1-211ENST00000560433 BRINP3Q76B58 766 aa14.09□□□□□ -0.15
SNRPA1-211ENST00000560433 KCNH5Q8NCM2 988 aa14.09□□□□□ -0.15
SNRPA1-211ENST00000560433 AXIN2Q9Y2T1 843 aa14.09□□□□□ -0.15
SNRPA1-211ENST00000560433 NBPF6Q5VWK0 638 aa14.09□□□□□ -0.15
SNRPA1-211ENST00000560433 IP6K1Q92551 441 aa14.09□□□□□ -0.15
SNRPA1-211ENST00000560433 NBPF4Q96M43 638 aa14.09□□□□□ -0.15
SNRPA1-211ENST00000560433 IGSF1Q8N6C5 1336 aa14.09□□□□□ -0.15
SNRPA1-211ENST00000560433 RGPD1P0DJD0 1748 aa14.08□□□□□ -0.15
SNRPA1-211ENST00000560433 TCERG1O14776 1098 aaKnown RBP14.08□□□□□ -0.16
SNRPA1-211ENST00000560433 PANK1Q8TE04 598 aa14.08□□□□□ -0.16
SNRPA1-211ENST00000560433 CLUAP1Q96AJ1 413 aa14.08□□□□□ -0.16
SNRPA1-211ENST00000560433 SLAIN2Q9P270 581 aa14.08□□□□□ -0.16
SNRPA1-211ENST00000560433 NFAT5O94916 1531 aa14.08□□□□□ -0.16
SNRPA1-211ENST00000560433 TRPM3Q9HCF6 1732 aaPredicted RBP14.08□□□□□ -0.16
SNRPA1-211ENST00000560433 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
SNRPA1-211ENST00000560433 MIS18AQ9NYP9 233 aa14.07□□□□□ -0.16
SNRPA1-211ENST00000560433 TSPYL6Q8N831 410 aa14.07□□□□□ -0.16
SNRPA1-211ENST00000560433 MBIPQ9NS73 344 aa14.07□□□□□ -0.16
SNRPA1-211ENST00000560433 ARHGEF10O15013 1369 aa14.07□□□□□ -0.16
SNRPA1-211ENST00000560433 ARHGEF25Q86VW2 580 aa14.06□□□□□ -0.16
SNRPA1-211ENST00000560433 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.06□□□□□ -0.16
SNRPA1-211ENST00000560433 DCCP43146 1447 aa14.06□□□□□ -0.16
SNRPA1-211ENST00000560433 NPHP3Q7Z494 1330 aa14.06□□□□□ -0.16
SNRPA1-211ENST00000560433 NCOA3Q9Y6Q9 1424 aa14.06□□□□□ -0.16
SNRPA1-211ENST00000560433 KIF1AQ12756 1690 aa14.06□□□□□ -0.16
SNRPA1-211ENST00000560433 USP54Q70EL1 1684 aa14.06□□□□□ -0.16
SNRPA1-211ENST00000560433 CHRNA2Q15822 529 aa14.05□□□□□ -0.16
SNRPA1-211ENST00000560433 KRT24Q2M2I5 525 aa14.05□□□□□ -0.16
SNRPA1-211ENST00000560433 PELP1Q8IZL8 1130 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-211ENST00000560433 COG6Q9Y2V7 657 aa14.05□□□□□ -0.16
SNRPA1-211ENST00000560433 IL16Q14005 1332 aa14.05□□□□□ -0.16
SNRPA1-211ENST00000560433 SSH1Q8WYL5 1049 aa14.05□□□□□ -0.16
SNRPA1-211ENST00000560433 RGPD2P0DJD1 1756 aa14.05□□□□□ -0.16
SNRPA1-211ENST00000560433 SMC4Q9NTJ3 1288 aa14.04□□□□□ -0.16
SNRPA1-211ENST00000560433 KDRP35968 1356 aa14.04□□□□□ -0.16
SNRPA1-211ENST00000560433 RLBP1P12271 317 aa14.04□□□□□ -0.16
SNRPA1-211ENST00000560433 USP19O94966 1318 aa14.03□□□□□ -0.16
SNRPA1-211ENST00000560433 MED1Q15648 1581 aaPredicted RBP14.03□□□□□ -0.16
SNRPA1-211ENST00000560433 SKAP1Q86WV1 359 aa14.03□□□□□ -0.16
SNRPA1-211ENST00000560433 ANKRD24Q8TF21 1146 aa14.03□□□□□ -0.16
SNRPA1-211ENST00000560433 LMOD3Q0VAK6 560 aa14.03□□□□□ -0.16
SNRPA1-211ENST00000560433 C8orf58Q8NAV2 365 aa14.03□□□□□ -0.16
SNRPA1-211ENST00000560433 ZNF853P0CG23 659 aa14.02□□□□□ -0.16
SNRPA1-211ENST00000560433 GNAI1P63096 354 aa14.02□□□□□ -0.16
SNRPA1-211ENST00000560433 CFAP44Q96MT7 982 aa14.02□□□□□ -0.16
SNRPA1-211ENST00000560433 IFT57Q9NWB7 429 aa14.02□□□□□ -0.16
SNRPA1-211ENST00000560433 RTF1Q92541 710 aaKnown RBP14.02□□□□□ -0.17
SNRPA1-211ENST00000560433 KIF24Q5T7B8 1368 aa14.02□□□□□ -0.17
SNRPA1-211ENST00000560433 ALS2Q96Q42 1657 aa14.02□□□□□ -0.17
SNRPA1-211ENST00000560433 RGPD5Q99666 1765 aa14.02□□□□□ -0.17
SNRPA1-211ENST00000560433 SPATA31A3Q5VYP0 1347 aa14.01□□□□□ -0.17
SNRPA1-211ENST00000560433 TSHZ2Q9NRE2 1034 aa14.01□□□□□ -0.17
SNRPA1-211ENST00000560433 RTL1A6NKG5 1358 aa14.01□□□□□ -0.17
SNRPA1-211ENST00000560433 SLIT3O75094 1523 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms