RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 TRIM26Q12899 539 aaPredicted RBP10.33□□□□□ -0.76
MARK3-220ENST00000560417 AGERQ15109 404 aa10.33□□□□□ -0.76
MARK3-220ENST00000560417 PLPP7Q8NBV4 271 aa10.33□□□□□ -0.76
MARK3-220ENST00000560417 VRTNQ9H8Y1 702 aa10.33□□□□□ -0.76
MARK3-220ENST00000560417 RPIAP49247 311 aa10.32□□□□□ -0.76
MARK3-220ENST00000560417 WNT7BP56706 349 aa10.32□□□□□ -0.76
MARK3-220ENST00000560417 MMRN1Q13201 1228 aa10.32□□□□□ -0.76
MARK3-220ENST00000560417 MAP7D1Q3KQU3 841 aa10.32□□□□□ -0.76
MARK3-220ENST00000560417 IFFO2Q5TF58 517 aa10.32□□□□□ -0.76
MARK3-220ENST00000560417 USTQ9Y2C2 406 aa10.32□□□□□ -0.76
MARK3-220ENST00000560417 ESPNB1AK53 854 aa10.31□□□□□ -0.76
MARK3-220ENST00000560417 TSGA10IPQ3SY00 556 aa10.31□□□□□ -0.76
MARK3-220ENST00000560417 CDCA8Q53HL2 280 aa10.31□□□□□ -0.76
MARK3-220ENST00000560417 GIGYF1O75420 1035 aaPredicted RBP10.3□□□□□ -0.76
MARK3-220ENST00000560417 PDE4CQ08493 712 aa10.3□□□□□ -0.76
MARK3-220ENST00000560417 NCOA4Q13772 614 aa10.3□□□□□ -0.76
MARK3-220ENST00000560417 ELOAQ14241 798 aaKnown RBP10.3□□□□□ -0.76
MARK3-220ENST00000560417 DEPDC4Q8N2C3 294 aa10.3□□□□□ -0.76
MARK3-220ENST00000560417 EMID1Q96A84 441 aaPredicted RBP10.3□□□□□ -0.76
MARK3-220ENST00000560417 SLC10A4Q96EP9 437 aa10.3□□□□□ -0.76
MARK3-220ENST00000560417 CCDC85AQ96PX6 553 aaPredicted RBP10.3□□□□□ -0.76
MARK3-220ENST00000560417 CDV3Q9UKY7 258 aaKnown RBP10.3□□□□□ -0.76
MARK3-220ENST00000560417 VARSP26640 1264 aaKnown RBP10.29□□□□□ -0.76
MARK3-220ENST00000560417 TMEM88BA6NKF7 163 aa10.28□□□□□ -0.76
MARK3-220ENST00000560417 CSB-PGBD3P0DP91 1061 aa10.28□□□□□ -0.76
MARK3-220ENST00000560417 NBPF20Q3BBV1 942 aa10.28□□□□□ -0.76
MARK3-220ENST00000560417 MKRN1Q9UHC7 482 aaKnown RBP10.28□□□□□ -0.76
MARK3-220ENST00000560417 FAM196BA6NMK8 535 aa10.27□□□□□ -0.77
MARK3-220ENST00000560417 LIAT1Q6ZQX7 453 aa10.27□□□□□ -0.77
MARK3-220ENST00000560417 SEPT12Q8IYM1 358 aa10.27□□□□□ -0.77
MARK3-220ENST00000560417 MAP4K5Q9Y4K4 846 aa10.27□□□□□ -0.77
MARK3-220ENST00000560417 ATP5J2-PTCD1G3V325 749 aa10.26□□□□□ -0.77
MARK3-220ENST00000560417 RNF20Q5VTR2 975 aa10.26□□□□□ -0.77
MARK3-220ENST00000560417 ZMIZ1Q9ULJ6 1067 aa10.26□□□□□ -0.77
MARK3-220ENST00000560417 EML3Q32P44 896 aa10.25□□□□□ -0.77
MARK3-220ENST00000560417 CRTC2Q53ET0 693 aaPredicted RBP10.25□□□□□ -0.77
MARK3-220ENST00000560417 CCDC125Q86Z20 511 aa10.25□□□□□ -0.77
MARK3-220ENST00000560417 KCTD17Q8N5Z5 321 aa10.25□□□□□ -0.77
MARK3-220ENST00000560417 DOLKQ9UPQ8 538 aa10.25□□□□□ -0.77
MARK3-220ENST00000560417 CD2BP2O95400 341 aaKnown RBP10.24□□□□□ -0.77
MARK3-220ENST00000560417 PTK7Q13308 1070 aa10.24□□□□□ -0.77
MARK3-220ENST00000560417 CARNS1A5YM72 827 aa10.23□□□□□ -0.77
MARK3-220ENST00000560417 USP17L15C9J2P7 530 aa10.23□□□□□ -0.77
MARK3-220ENST00000560417 USP17L10C9JJH3 530 aa10.23□□□□□ -0.77
MARK3-220ENST00000560417 USP17L13C9JLJ4 530 aa10.23□□□□□ -0.77
MARK3-220ENST00000560417 USP17L12C9JPN9 530 aa10.23□□□□□ -0.77
MARK3-220ENST00000560417 USP17L11C9JVI0 530 aa10.23□□□□□ -0.77
MARK3-220ENST00000560417 USP17L21D6R901 530 aa10.23□□□□□ -0.77
MARK3-220ENST00000560417 USP17L18D6R9N7 530 aa10.23□□□□□ -0.77
MARK3-220ENST00000560417 USP17L22D6RA61 530 aa10.23□□□□□ -0.77
MARK3-220ENST00000560417 USP17L17D6RBQ6 530 aa10.23□□□□□ -0.77
MARK3-220ENST00000560417 USP17L19D6RCP7 530 aa10.23□□□□□ -0.77
MARK3-220ENST00000560417 USP17L20D6RJB6 530 aa10.23□□□□□ -0.77
MARK3-220ENST00000560417 USP17L24Q0WX57 530 aa10.23□□□□□ -0.77
MARK3-220ENST00000560417 RC3H1Q5TC82 1133 aaKnown RBP10.23□□□□□ -0.77
MARK3-220ENST00000560417 MPNDQ8N594 471 aa10.23□□□□□ -0.77
MARK3-220ENST00000560417 CDK15Q96Q40 435 aa10.23□□□□□ -0.77
MARK3-220ENST00000560417 KCTD15Q96SI1 283 aaPredicted RBP10.23□□□□□ -0.77
MARK3-220ENST00000560417 CDCA7Q9BWT1 371 aaPredicted RBP10.23□□□□□ -0.77
MARK3-220ENST00000560417 CLDN10P78369 228 aa10.22□□□□□ -0.77
MARK3-220ENST00000560417 NOVA2Q9UNW9 492 aaKnown RBP10.22□□□□□ -0.77
MARK3-220ENST00000560417 SIAH2O43255 324 aa10.21□□□□□ -0.77
MARK3-220ENST00000560417 RASA1P20936 1047 aa10.21□□□□□ -0.77
MARK3-220ENST00000560417 INTS6LQ5JSJ4 861 aaKnown RBP10.21□□□□□ -0.77
MARK3-220ENST00000560417 EHBP1Q8NDI1 1231 aa10.21□□□□□ -0.77
MARK3-220ENST00000560417 STK32AQ8WU08 396 aa10.21□□□□□ -0.77
MARK3-220ENST00000560417 NOD1Q9Y239 953 aa10.21□□□□□ -0.77
MARK3-220ENST00000560417 DKK1O94907 266 aa10.2□□□□□ -0.78
MARK3-220ENST00000560417 TMEM164Q5U3C3 297 aa10.2□□□□□ -0.78
MARK3-220ENST00000560417 LARP1Q6PKG0 1096 aaKnown RBP10.2□□□□□ -0.78
MARK3-220ENST00000560417 VASH1Q7L8A9 365 aaPredicted RBP10.2□□□□□ -0.78
MARK3-220ENST00000560417 OGFOD1Q8N543 542 aa10.2□□□□□ -0.78
MARK3-220ENST00000560417 ZBTB7BO15156 539 aaPredicted RBP10.19□□□□□ -0.78
MARK3-220ENST00000560417 BRD1O95696 1058 aa10.19□□□□□ -0.78
MARK3-220ENST00000560417 GRM5P41594 1212 aa10.19□□□□□ -0.78
MARK3-220ENST00000560417 OXLD1Q5BKU9 147 aa10.19□□□□□ -0.78
MARK3-220ENST00000560417 TRIM50Q86XT4 487 aa10.19□□□□□ -0.78
MARK3-220ENST00000560417 ZBTB7CA1YPR0 619 aa10.18□□□□□ -0.78
MARK3-220ENST00000560417 SLC19A1P41440 591 aa10.18□□□□□ -0.78
MARK3-220ENST00000560417 ATP1A2P50993 1020 aa10.18□□□□□ -0.78
MARK3-220ENST00000560417 FAM69CQ0P6D2 419 aa10.18□□□□□ -0.78
MARK3-220ENST00000560417 ANKMY2Q8IV38 441 aa10.18□□□□□ -0.78
MARK3-220ENST00000560417 SIX5Q8N196 739 aa10.18□□□□□ -0.78
MARK3-220ENST00000560417 LARGE2Q8N3Y3 721 aa10.18□□□□□ -0.78
MARK3-220ENST00000560417 PODXL2Q9NZ53 605 aa10.18□□□□□ -0.78
MARK3-220ENST00000560417 KIAA1024Q9UPX6 916 aa10.18□□□□□ -0.78
MARK3-220ENST00000560417 PCDHB11Q9Y5F2 797 aa10.18□□□□□ -0.78
MARK3-220ENST00000560417 PCDHGA11Q9Y5H2 935 aa10.18□□□□□ -0.78
MARK3-220ENST00000560417 ERVH48-1M5A8F1 160 aa10.17□□□□□ -0.78
MARK3-220ENST00000560417 WNT7AO00755 349 aa10.17□□□□□ -0.78
MARK3-220ENST00000560417 USP4Q13107 963 aa10.17□□□□□ -0.78
MARK3-220ENST00000560417 AEBP1Q8IUX7 1158 aa10.17□□□□□ -0.78
MARK3-220ENST00000560417 SIRT1Q96EB6 747 aa10.17□□□□□ -0.78
MARK3-220ENST00000560417 DNAAF2Q9NVR5 837 aaKnown RBP10.17□□□□□ -0.78
MARK3-220ENST00000560417 GTF2IP78347 998 aa10.16□□□□□ -0.78
MARK3-220ENST00000560417 SPRYD7Q5W111 196 aa10.16□□□□□ -0.78
MARK3-220ENST00000560417 TLL2Q9Y6L7 1015 aa10.16□□□□□ -0.78
MARK3-220ENST00000560417 DPYDQ12882 1025 aa10.15□□□□□ -0.78
MARK3-220ENST00000560417 FAM200AQ8TCP9 573 aa10.15□□□□□ -0.78
MARK3-220ENST00000560417 A0A0G2JS52 829 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms