RNA–Protein interactions for RNA: ENST00000560234.1

PCLAF-208, Transcript of PCNA clamp associated factor, human

TSL 2

Gene PCLAF, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCLAF-208	ENST00000560234	CPSF1	Q10570	1443 aa	Known RBP	13.64	□□□□□ -0.23
PCLAF-208	ENST00000560234		A0A1W2PP64	1363 aa		13.63	□□□□□ -0.23
PCLAF-208	ENST00000560234	NME9	Q86XW9	330 aa		13.63	□□□□□ -0.23
PCLAF-208	ENST00000560234	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.63	□□□□□ -0.23
PCLAF-208	ENST00000560234	TTC21A	Q8NDW8	1320 aa		13.63	□□□□□ -0.23
PCLAF-208	ENST00000560234	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.62	□□□□□ -0.23
PCLAF-208	ENST00000560234	NINL	Q9Y2I6	1382 aa		13.62	□□□□□ -0.23
PCLAF-208	ENST00000560234	GC	P02774	474 aa		13.62	□□□□□ -0.23
PCLAF-208	ENST00000560234	TRPC5	Q9UL62	973 aa	Predicted RBP	13.62	□□□□□ -0.23
PCLAF-208	ENST00000560234	KIAA0232	Q92628	1395 aa		13.61	□□□□□ -0.23
PCLAF-208	ENST00000560234	UNC5CL	Q8IV45	518 aa		13.61	□□□□□ -0.23
PCLAF-208	ENST00000560234	MS4A3	Q96HJ5	214 aa		13.61	□□□□□ -0.23
PCLAF-208	ENST00000560234	BTG4	Q9NY30	223 aa		13.61	□□□□□ -0.23
PCLAF-208	ENST00000560234	SSH2	Q76I76	1423 aa		13.6	□□□□□ -0.23
PCLAF-208	ENST00000560234	STRN4	Q9NRL3	753 aa		13.6	□□□□□ -0.23
PCLAF-208	ENST00000560234	CD163L1	Q9NR16	1453 aa		13.6	□□□□□ -0.23
PCLAF-208	ENST00000560234	USP19	O94966	1318 aa		13.6	□□□□□ -0.23
PCLAF-208	ENST00000560234	EDC4	Q6P2E9	1401 aa	Known RBP	13.59	□□□□□ -0.23
PCLAF-208	ENST00000560234	C11orf95	C9JLR9	678 aa	Predicted RBP	13.59	□□□□□ -0.23
PCLAF-208	ENST00000560234	EVA1C	P58658	441 aa		13.59	□□□□□ -0.23
PCLAF-208	ENST00000560234	RBM6	P78332	1123 aa	Known RBP	13.59	□□□□□ -0.23
PCLAF-208	ENST00000560234	ALS2	Q96Q42	1657 aa		13.59	□□□□□ -0.23
PCLAF-208	ENST00000560234	ANKRD36B	Q8N2N9	1353 aa		13.58	□□□□□ -0.23
PCLAF-208	ENST00000560234	KCNH5	Q8NCM2	988 aa		13.58	□□□□□ -0.24
PCLAF-208	ENST00000560234	BCL9L	Q86UU0	1499 aa		13.57	□□□□□ -0.24
PCLAF-208	ENST00000560234	PELP1	Q8IZL8	1130 aa	Known RBP	13.57	□□□□□ -0.24
PCLAF-208	ENST00000560234	COG3	Q96JB2	828 aa		13.57	□□□□□ -0.24
PCLAF-208	ENST00000560234	GGNBP2	Q9H3C7	697 aa		13.57	□□□□□ -0.24
PCLAF-208	ENST00000560234		A0A0G2JS52	829 aa		13.56	□□□□□ -0.24
PCLAF-208	ENST00000560234	MYT1	Q01538	1121 aa		13.56	□□□□□ -0.24
PCLAF-208	ENST00000560234	FKBP8	Q14318	412 aa		13.56	□□□□□ -0.24
PCLAF-208	ENST00000560234	GJD4	Q96KN9	370 aa	Predicted RBP	13.56	□□□□□ -0.24
PCLAF-208	ENST00000560234	SLIT2	O94813	1529 aa		13.55	□□□□□ -0.24
PCLAF-208	ENST00000560234	VPS72	Q15906	364 aa		13.55	□□□□□ -0.24
PCLAF-208	ENST00000560234	ASTL	Q6HA08	431 aa	Predicted RBP	13.55	□□□□□ -0.24
PCLAF-208	ENST00000560234	CARD14	Q9BXL6	1004 aa		13.55	□□□□□ -0.24
PCLAF-208	ENST00000560234	PANK3	Q9H999	370 aa		13.55	□□□□□ -0.24
PCLAF-208	ENST00000560234	ATRN	O75882	1429 aa		13.55	□□□□□ -0.24
PCLAF-208	ENST00000560234	USP35	Q9P2H5	1018 aa		13.54	□□□□□ -0.24
PCLAF-208	ENST00000560234	KIF7	Q2M1P5	1343 aa		13.54	□□□□□ -0.24
PCLAF-208	ENST00000560234	USP31	Q70CQ4	1352 aa		13.54	□□□□□ -0.24
PCLAF-208	ENST00000560234	FYB1	O15117	783 aa		13.53	□□□□□ -0.24
PCLAF-208	ENST00000560234	RASEF	Q8IZ41	740 aa		13.53	□□□□□ -0.24
PCLAF-208	ENST00000560234	KIF12	Q96FN5	646 aa		13.53	□□□□□ -0.24
PCLAF-208	ENST00000560234	CPD	O75976	1380 aa		13.53	□□□□□ -0.24
PCLAF-208	ENST00000560234	NSD3	Q9BZ95	1437 aa		13.53	□□□□□ -0.24
PCLAF-208	ENST00000560234	POTEB2	H3BUK9	544 aa		13.52	□□□□□ -0.25
PCLAF-208	ENST00000560234	SOCS7	O14512	581 aa		13.52	□□□□□ -0.25
PCLAF-208	ENST00000560234	CSB-PGBD3	P0DP91	1061 aa		13.52	□□□□□ -0.25
PCLAF-208	ENST00000560234	ARHGEF25	Q86VW2	580 aa		13.52	□□□□□ -0.25
PCLAF-208	ENST00000560234	PIK3C2A	O00443	1686 aa		13.51	□□□□□ -0.25
PCLAF-208	ENST00000560234	CGNL1	Q0VF96	1302 aa		13.51	□□□□□ -0.25
PCLAF-208	ENST00000560234	ATMIN	O43313	823 aa	Predicted RBP	13.51	□□□□□ -0.25
PCLAF-208	ENST00000560234	FBLN1	P23142	703 aa		13.51	□□□□□ -0.25
PCLAF-208	ENST00000560234	FAM98C	Q17RN3	349 aa	Known RBP	13.51	□□□□□ -0.25
PCLAF-208	ENST00000560234	LARP1	Q6PKG0	1096 aa	Known RBP	13.51	□□□□□ -0.25
PCLAF-208	ENST00000560234	PLCD3	Q8N3E9	789 aa		13.51	□□□□□ -0.25
PCLAF-208	ENST00000560234	AKAP12	Q02952	1782 aa		13.5	□□□□□ -0.25
PCLAF-208	ENST00000560234	ABCA3	Q99758	1704 aa		13.5	□□□□□ -0.25
PCLAF-208	ENST00000560234	NRK	Q7Z2Y5	1582 aa		13.5	□□□□□ -0.25
PCLAF-208	ENST00000560234	AATK	Q6ZMQ8	1374 aa		13.5	□□□□□ -0.25
PCLAF-208	ENST00000560234	AXIN2	Q9Y2T1	843 aa		13.5	□□□□□ -0.25
PCLAF-208	ENST00000560234	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.5	□□□□□ -0.25
PCLAF-208	ENST00000560234	SLIT3	O75094	1523 aa		13.49	□□□□□ -0.25
PCLAF-208	ENST00000560234	SPATA31A5	Q5VU36	1347 aa		13.49	□□□□□ -0.25
PCLAF-208	ENST00000560234	SPATA31A7	Q8IWB4	1347 aa		13.49	□□□□□ -0.25
PCLAF-208	ENST00000560234	ZEB1	P37275	1124 aa	Predicted RBP	13.49	□□□□□ -0.25
PCLAF-208	ENST00000560234	AMPH	P49418	695 aa		13.49	□□□□□ -0.25
PCLAF-208	ENST00000560234	CNGB1	Q14028	1251 aa	Predicted RBP	13.49	□□□□□ -0.25
PCLAF-208	ENST00000560234	TOM1L2	Q6ZVM7	507 aa		13.49	□□□□□ -0.25
PCLAF-208	ENST00000560234	SEPT12	Q8IYM1	358 aa		13.49	□□□□□ -0.25
PCLAF-208	ENST00000560234	KNSTRN	Q9Y448	316 aa		13.49	□□□□□ -0.25
PCLAF-208	ENST00000560234	MON2	Q7Z3U7	1717 aa		13.49	□□□□□ -0.25
PCLAF-208	ENST00000560234	OVOS2	A0A0J9YW53	1432 aa		13.48	□□□□□ -0.25
PCLAF-208	ENST00000560234	RGS12	O14924	1447 aa		13.48	□□□□□ -0.25
PCLAF-208	ENST00000560234	OVOS2	Q6IE36	1432 aa		13.48	□□□□□ -0.25
PCLAF-208	ENST00000560234	COL14A1	Q05707	1796 aa	Known RBP	13.48	□□□□□ -0.25
PCLAF-208	ENST00000560234	TNNT2	P45379	298 aa	Predicted RBP	13.48	□□□□□ -0.25
PCLAF-208	ENST00000560234	LTV1	Q96GA3	475 aa	Predicted RBP	13.48	□□□□□ -0.25
PCLAF-208	ENST00000560234	CCDC7	Q96M83	1385 aa		13.47	□□□□□ -0.25
PCLAF-208	ENST00000560234	WASHC2A	Q641Q2	1341 aa		13.47	□□□□□ -0.25
PCLAF-208	ENST00000560234	RRS1	Q15050	365 aa	Known RBP	13.47	□□□□□ -0.25
PCLAF-208	ENST00000560234	MARF1	Q9Y4F3	1742 aa	Known RBP	13.47	□□□□□ -0.25
PCLAF-208	ENST00000560234	CRYBG1	Q9Y4K1	1723 aa		13.47	□□□□□ -0.25
PCLAF-208	ENST00000560234	CAMTA1	Q9Y6Y1	1673 aa		13.47	□□□□□ -0.25
PCLAF-208	ENST00000560234	MAP3K19	Q56UN5	1328 aa		13.46	□□□□□ -0.25
PCLAF-208	ENST00000560234	SPATA31A1	Q5TZJ5	1347 aa		13.46	□□□□□ -0.25
PCLAF-208	ENST00000560234	PPM1G	O15355	546 aa	Predicted RBP	13.46	□□□□□ -0.25
PCLAF-208	ENST00000560234	OTUD5	Q96G74	571 aa		13.46	□□□□□ -0.25
PCLAF-208	ENST00000560234	NLRP2	Q9NX02	1062 aa		13.46	□□□□□ -0.25
PCLAF-208	ENST00000560234	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.46	□□□□□ -0.25
PCLAF-208	ENST00000560234	PLCH1	Q4KWH8	1693 aa		13.46	□□□□□ -0.26
PCLAF-208	ENST00000560234	TCP11L2	Q8N4U5	519 aa		13.45	□□□□□ -0.26
PCLAF-208	ENST00000560234	NFAT5	O94916	1531 aa		13.44	□□□□□ -0.26
PCLAF-208	ENST00000560234	MORC1	Q86VD1	984 aa		13.44	□□□□□ -0.26
PCLAF-208	ENST00000560234	ANKRD24	Q8TF21	1146 aa		13.44	□□□□□ -0.26
PCLAF-208	ENST00000560234	IP6K1	Q92551	441 aa		13.44	□□□□□ -0.26
PCLAF-208	ENST00000560234	WDR17	Q8IZU2	1322 aa		13.43	□□□□□ -0.26
PCLAF-208	ENST00000560234	COL5A2	P05997	1499 aa	Predicted RBP	13.43	□□□□□ -0.26
PCLAF-208	ENST00000560234	MAP3K13	O43283	966 aa		13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms