RNA–Protein interactions for RNA: ENST00000560099.5

PSMA4-218, Transcript of proteasome subunit alpha 4, humanhuman

TSL 2

Gene PSMA4, Length 2,596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-218ENST00000560099 NRXN3Q9Y4C0 1643 aa25.92■■□□□ 1.74
PSMA4-218ENST00000560099 REREQ9P2R6 1566 aa25.92■■□□□ 1.74
PSMA4-218ENST00000560099 MBIPQ9NS73 344 aa25.92■■□□□ 1.74
PSMA4-218ENST00000560099 DLG5Q8TDM6 1919 aa25.91■■□□□ 1.74
PSMA4-218ENST00000560099 ZNF853P0CG23 659 aa25.91■■□□□ 1.74
PSMA4-218ENST00000560099 CHD1LQ86WJ1 897 aa25.91■■□□□ 1.74
PSMA4-218ENST00000560099 C1orf115Q9H7X2 142 aa25.91■■□□□ 1.74
PSMA4-218ENST00000560099 DIP2BQ9P265 1576 aa25.91■■□□□ 1.74
PSMA4-218ENST00000560099 RRS1Q15050 365 aaKnown RBP25.9■■□□□ 1.74
PSMA4-218ENST00000560099 IFT57Q9NWB7 429 aa25.9■■□□□ 1.74
PSMA4-218ENST00000560099 GNAI1P63096 354 aa25.9■■□□□ 1.74
PSMA4-218ENST00000560099 NUDT16Q96DE0 195 aaKnown RBP25.9■■□□□ 1.74
PSMA4-218ENST00000560099 CDK12Q9NYV4 1490 aaPredicted RBP25.89■■□□□ 1.74
PSMA4-218ENST00000560099 CPS1P31327 1500 aa25.89■■□□□ 1.73
PSMA4-218ENST00000560099 PTCH1Q13635 1447 aa25.88■■□□□ 1.73
PSMA4-218ENST00000560099 CALD1Q05682 793 aaKnown RBP25.88■■□□□ 1.73
PSMA4-218ENST00000560099 ARHGAP45Q92619 1136 aa25.88■■□□□ 1.73
PSMA4-218ENST00000560099 PIK3R4Q99570 1358 aa25.87■■□□□ 1.73
PSMA4-218ENST00000560099 AATKQ6ZMQ8 1374 aa25.87■■□□□ 1.73
PSMA4-218ENST00000560099 FAM83GA6ND36 823 aa25.86■■□□□ 1.73
PSMA4-218ENST00000560099 C8orf58Q8NAV2 365 aa25.86■■□□□ 1.73
PSMA4-218ENST00000560099 COG3Q96JB2 828 aa25.85■■□□□ 1.73
PSMA4-218ENST00000560099 ANKRD45Q5TZF3 282 aa25.85■■□□□ 1.73
PSMA4-218ENST00000560099 SIRT2Q8IXJ6 389 aa25.85■■□□□ 1.73
PSMA4-218ENST00000560099 TWISTNBQ3B726 338 aaPredicted RBP25.84■■□□□ 1.73
PSMA4-218ENST00000560099 CCDC61Q9Y6R9 512 aa25.84■■□□□ 1.73
PSMA4-218ENST00000560099 CFAP44Q96MT7 982 aa25.84■■□□□ 1.73
PSMA4-218ENST00000560099 DCTN1Q14203 1278 aa25.83■■□□□ 1.73
PSMA4-218ENST00000560099 ABCC4O15439 1325 aa25.83■■□□□ 1.73
PSMA4-218ENST00000560099 MON2Q7Z3U7 1717 aa25.83■■□□□ 1.73
PSMA4-218ENST00000560099 RBM25P49756 843 aaKnown RBP25.81■■□□□ 1.72
PSMA4-218ENST00000560099 BMP2KLQ5H9B9 411 aa25.81■■□□□ 1.72
PSMA4-218ENST00000560099 GCC1Q96CN9 775 aa25.81■■□□□ 1.72
PSMA4-218ENST00000560099 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.8■■□□□ 1.72
PSMA4-218ENST00000560099 PRR36Q9H6K5 1346 aa25.8■■□□□ 1.72
PSMA4-218ENST00000560099 MCM4P33991 863 aa25.79■■□□□ 1.72
PSMA4-218ENST00000560099 CHMP5Q9NZZ3 219 aa25.79■■□□□ 1.72
PSMA4-218ENST00000560099 C3P01024 1663 aa25.78■■□□□ 1.72
PSMA4-218ENST00000560099 CHMP4BQ9H444 224 aaKnown RBP25.78■■□□□ 1.72
PSMA4-218ENST00000560099 AKAP12Q02952 1782 aa25.78■■□□□ 1.72
PSMA4-218ENST00000560099 LMOD3Q0VAK6 560 aa25.78■■□□□ 1.72
PSMA4-218ENST00000560099 HSCBQ8IWL3 235 aa25.78■■□□□ 1.72
PSMA4-218ENST00000560099 ZNF692Q9BU19 519 aaPredicted RBP25.77■■□□□ 1.72
PSMA4-218ENST00000560099 AEBP1Q8IUX7 1158 aa25.76■■□□□ 1.71
PSMA4-218ENST00000560099 KNDC1Q76NI1 1749 aa25.75■■□□□ 1.71
PSMA4-218ENST00000560099 TECPR2O15040 1411 aa25.75■■□□□ 1.71
PSMA4-218ENST00000560099 ITSN1Q15811 1721 aa25.74■■□□□ 1.71
PSMA4-218ENST00000560099 SIRT1Q96EB6 747 aa25.74■■□□□ 1.71
PSMA4-218ENST00000560099 API5Q9BZZ5 524 aaKnown RBP25.73■■□□□ 1.71
PSMA4-218ENST00000560099 KIF2CQ99661 725 aa25.73■■□□□ 1.71
PSMA4-218ENST00000560099 EIF4A2Q14240 407 aaKnown RBP25.72■■□□□ 1.71
PSMA4-218ENST00000560099 SNX21Q969T3 373 aa25.72■■□□□ 1.71
PSMA4-218ENST00000560099 NCOA3Q9Y6Q9 1424 aa25.72■■□□□ 1.71
PSMA4-218ENST00000560099 KRT24Q2M2I5 525 aa25.72■■□□□ 1.71
PSMA4-218ENST00000560099 TBC1D9Q6ZT07 1266 aa25.72■■□□□ 1.71
PSMA4-218ENST00000560099 DDIT3P35638 169 aa25.71■■□□□ 1.71
PSMA4-218ENST00000560099 SULT6B1Q6IMI4 303 aa25.71■■□□□ 1.71
PSMA4-218ENST00000560099 ROBO2Q9HCK4 1378 aa25.71■■□□□ 1.71
PSMA4-218ENST00000560099 ESF1Q9H501 851 aaKnown RBP25.69■■□□□ 1.7
PSMA4-218ENST00000560099 GZF1Q9H116 711 aaPredicted RBP25.68■■□□□ 1.7
PSMA4-218ENST00000560099 TTC21BQ7Z4L5 1316 aa25.68■■□□□ 1.7
PSMA4-218ENST00000560099 NUTM2FA1L443 756 aa25.67■■□□□ 1.7
PSMA4-218ENST00000560099 NRKQ7Z2Y5 1582 aa25.67■■□□□ 1.7
PSMA4-218ENST00000560099 CD2BP2O95400 341 aaKnown RBP25.66■■□□□ 1.7
PSMA4-218ENST00000560099 HDGFP51858 240 aaKnown RBP25.66■■□□□ 1.7
PSMA4-218ENST00000560099 ANO8Q9HCE9 1232 aaPredicted RBP25.66■■□□□ 1.7
PSMA4-218ENST00000560099 MCM10Q7L590 875 aa25.66■■□□□ 1.7
PSMA4-218ENST00000560099 ACEP12821 1306 aa25.65■■□□□ 1.7
PSMA4-218ENST00000560099 TRAK2O60296 914 aa25.65■■□□□ 1.7
PSMA4-218ENST00000560099 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.64■■□□□ 1.7
PSMA4-218ENST00000560099 CHL1O00533 1208 aa25.64■■□□□ 1.7
PSMA4-218ENST00000560099 GSPT1P15170 499 aaKnown RBP25.64■■□□□ 1.7
PSMA4-218ENST00000560099 L1TD1Q5T7N2 865 aaKnown RBP25.64■■□□□ 1.7
PSMA4-218ENST00000560099 INTS3Q68E01 1043 aaKnown RBP25.64■■□□□ 1.7
PSMA4-218ENST00000560099 ARXQ96QS3 562 aa25.64■■□□□ 1.7
PSMA4-218ENST00000560099 HSP90AB2PQ58FF8 381 aa25.64■■□□□ 1.69
PSMA4-218ENST00000560099 PLEKHM2Q8IWE5 1019 aa25.64■■□□□ 1.69
PSMA4-218ENST00000560099 RBM42Q9BTD8 480 aaKnown RBP25.64■■□□□ 1.69
PSMA4-218ENST00000560099 DCTPP1Q9H773 170 aa25.64■■□□□ 1.69
PSMA4-218ENST00000560099 KIF24Q5T7B8 1368 aa25.64■■□□□ 1.69
PSMA4-218ENST00000560099 TMEM2Q9UHN6 1383 aa25.64■■□□□ 1.69
PSMA4-218ENST00000560099 TNRQ92752 1358 aa25.63■■□□□ 1.69
PSMA4-218ENST00000560099 RGS12O14924 1447 aa25.63■■□□□ 1.69
PSMA4-218ENST00000560099 ADAMTS13Q76LX8 1427 aa25.62■■□□□ 1.69
PSMA4-218ENST00000560099 HSP90AB1P08238 724 aaKnown RBP25.62■■□□□ 1.69
PSMA4-218ENST00000560099 OVOS2A0A0J9YW53 1432 aa25.62■■□□□ 1.69
PSMA4-218ENST00000560099 OVOS2Q6IE36 1432 aa25.62■■□□□ 1.69
PSMA4-218ENST00000560099 FSD2A1L4K1 749 aa25.61■■□□□ 1.69
PSMA4-218ENST00000560099 PEAK1Q9H792 1746 aa25.61■■□□□ 1.69
PSMA4-218ENST00000560099 C16orf71Q8IYS4 520 aaPredicted RBP25.61■■□□□ 1.69
PSMA4-218ENST00000560099 UBR1Q8IWV7 1749 aa25.6■■□□□ 1.69
PSMA4-218ENST00000560099 CDC45O75419 566 aa25.6■■□□□ 1.69
PSMA4-218ENST00000560099 XRCC6P12956 609 aaKnown RBP eCLIP25.6■■□□□ 1.69
PSMA4-218ENST00000560099 ATP10DQ9P241 1426 aa25.59■■□□□ 1.69
PSMA4-218ENST00000560099 SOX12O15370 315 aa25.59■■□□□ 1.69
PSMA4-218ENST00000560099 TNPO1Q92973 898 aaKnown RBP25.59■■□□□ 1.69
PSMA4-218ENST00000560099 PLEKHG3A1L390 1219 aa25.58■■□□□ 1.69
PSMA4-218ENST00000560099 GOLGA6L3A6NEY3 463 aa25.58■■□□□ 1.69
PSMA4-218ENST00000560099 ANKRD44Q8N8A2 993 aa25.58■■□□□ 1.69
PSMA4-218ENST00000560099 FAM43AQ8N2R8 423 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms