RNA–Protein interactions for RNA: ENST00000559432.5

CRNDE-206, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 3 BASIC

Gene CRNDE, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-206ENST00000559432 NINLQ9Y2I6 1382 aa35.4■■■■□ 3.26
CRNDE-206ENST00000559432 NME9Q86XW9 330 aa35.4■■■■□ 3.26
CRNDE-206ENST00000559432 AXIN2Q9Y2T1 843 aa35.4■■■■□ 3.26
CRNDE-206ENST00000559432 RGPD1P0DJD0 1748 aa35.4■■■■□ 3.26
CRNDE-206ENST00000559432 A0A1W2PP64 1363 aa35.39■■■■□ 3.26
CRNDE-206ENST00000559432 COL18A1P39060 1754 aa35.39■■■■□ 3.26
CRNDE-206ENST00000559432 USP47Q96K76 1375 aa35.38■■■■□ 3.26
CRNDE-206ENST00000559432 NFAT5O94916 1531 aa35.37■■■■□ 3.25
CRNDE-206ENST00000559432 WDR17Q8IZU2 1322 aa35.37■■■■□ 3.25
CRNDE-206ENST00000559432 CSB-PGBD3P0DP91 1061 aa35.35■■■■□ 3.25
CRNDE-206ENST00000559432 TMF1P82094 1093 aa35.34■■■■□ 3.25
CRNDE-206ENST00000559432 USP54Q70EL1 1684 aa35.33■■■■□ 3.25
CRNDE-206ENST00000559432 TRIM37O94972 964 aa35.32■■■■□ 3.24
CRNDE-206ENST00000559432 PARP4Q9UKK3 1724 aaKnown RBP35.32■■■■□ 3.24
CRNDE-206ENST00000559432 EN1Q05925 392 aaPredicted RBP35.31■■■■□ 3.24
CRNDE-206ENST00000559432 ABCC6O95255 1503 aa35.31■■■■□ 3.24
CRNDE-206ENST00000559432 DISP2A7MBM2 1401 aa35.28■■■■□ 3.24
CRNDE-206ENST00000559432 TNS1Q9HBL0 1735 aaKnown RBP35.27■■■■□ 3.24
CRNDE-206ENST00000559432 DDB1Q16531 1140 aa35.27■■■■□ 3.24
CRNDE-206ENST00000559432 CDCA7Q9BWT1 371 aaPredicted RBP35.27■■■■□ 3.24
CRNDE-206ENST00000559432 C11orf95C9JLR9 678 aaPredicted RBP35.26■■■■□ 3.24
CRNDE-206ENST00000559432 CARD10Q9BWT7 1032 aa35.26■■■■□ 3.24
CRNDE-206ENST00000559432 RGPD5Q99666 1765 aa35.25■■■■□ 3.23
CRNDE-206ENST00000559432 APBA3O96018 575 aa35.24■■■■□ 3.23
CRNDE-206ENST00000559432 CDCA8Q53HL2 280 aa35.24■■■■□ 3.23
CRNDE-206ENST00000559432 OVOS2A0A0J9YW53 1432 aa35.23■■■■□ 3.23
CRNDE-206ENST00000559432 OVOS2Q6IE36 1432 aa35.23■■■■□ 3.23
CRNDE-206ENST00000559432 ANKRD36BQ8N2N9 1353 aa35.23■■■■□ 3.23
CRNDE-206ENST00000559432 LRRC37A3O60309 1634 aa35.21■■■■□ 3.23
CRNDE-206ENST00000559432 CCDC7Q96M83 1385 aa35.21■■■■□ 3.23
CRNDE-206ENST00000559432 OVOS2A0A0G2JMS6 1433 aa35.21■■■■□ 3.23
CRNDE-206ENST00000559432 EZH2Q15910 746 aaKnown RBP35.2■■■■□ 3.23
CRNDE-206ENST00000559432 COG3Q96JB2 828 aa35.2■■■■□ 3.23
CRNDE-206ENST00000559432 CCER1Q8TC90 406 aaPredicted RBP35.19■■■■□ 3.22
CRNDE-206ENST00000559432 LTN1O94822 1766 aa35.18■■■■□ 3.22
CRNDE-206ENST00000559432 ERBB3P21860 1342 aa35.18■■■■□ 3.22
CRNDE-206ENST00000559432 WNK3Q9BYP7 1800 aa35.18■■■■□ 3.22
CRNDE-206ENST00000559432 CAMKK2Q96RR4 588 aa35.17■■■■□ 3.22
CRNDE-206ENST00000559432 PARD3Q8TEW0 1356 aa35.15■■■■□ 3.22
CRNDE-206ENST00000559432 NLRP2Q9NX02 1062 aa35.15■■■■□ 3.22
CRNDE-206ENST00000559432 ANKRD24Q8TF21 1146 aa35.14■■■■□ 3.22
CRNDE-206ENST00000559432 PSDA5PKW4 1024 aaPredicted RBP35.13■■■■□ 3.21
CRNDE-206ENST00000559432 EXOC5O00471 708 aa35.12■■■■□ 3.21
CRNDE-206ENST00000559432 PEAK1Q9H792 1746 aa35.1■■■■□ 3.21
CRNDE-206ENST00000559432 MARCH10Q8NA82 808 aaPredicted RBP35.09■■■■□ 3.21
CRNDE-206ENST00000559432 IP6K1Q92551 441 aa35.09■■■■□ 3.21
CRNDE-206ENST00000559432 AMPHP49418 695 aa35.05■■■■□ 3.2
CRNDE-206ENST00000559432 R3HDM1Q15032 1099 aaKnown RBP35.05■■■■□ 3.2
CRNDE-206ENST00000559432 FYB1O15117 783 aa35.04■■■■□ 3.2
CRNDE-206ENST00000559432 IL2RBP14784 551 aa35.04■■■■□ 3.2
CRNDE-206ENST00000559432 GGNBP2Q9H3C7 697 aa35.04■■■■□ 3.2
CRNDE-206ENST00000559432 TNS2Q63HR2 1409 aa35.04■■■■□ 3.2
CRNDE-206ENST00000559432 MAP3K19Q56UN5 1328 aa35.04■■■■□ 3.2
CRNDE-206ENST00000559432 LTV1Q96GA3 475 aaPredicted RBP35.03■■■■□ 3.2
CRNDE-206ENST00000559432 BCL9O00512 1426 aa35.02■■■■□ 3.2
CRNDE-206ENST00000559432 BCL11BQ9C0K0 894 aaPredicted RBP35.02■■■■□ 3.2
CRNDE-206ENST00000559432 RREB1Q92766 1687 aa34.99■■■■□ 3.19
CRNDE-206ENST00000559432 FBLN1P23142 703 aa34.99■■■■□ 3.19
CRNDE-206ENST00000559432 HOXC9P31274 260 aa34.99■■■■□ 3.19
CRNDE-206ENST00000559432 NBPF14Q5TI25 921 aa34.99■■■■□ 3.19
CRNDE-206ENST00000559432 SBF2Q86WG5 1849 aa34.97■■■■□ 3.19
CRNDE-206ENST00000559432 MYOM1P52179 1685 aa34.96■■■■□ 3.19
CRNDE-206ENST00000559432 PLSCR1O15162 318 aa34.96■■■■□ 3.19
CRNDE-206ENST00000559432 EIF4G2P78344 907 aaKnown RBP eCLIP34.96■■■■□ 3.19
CRNDE-206ENST00000559432 FAM208AQ9UK61 1670 aaKnown RBP34.95■■■■□ 3.19
CRNDE-206ENST00000559432 RTL1A6NKG5 1358 aa34.95■■■■□ 3.19
CRNDE-206ENST00000559432 RRS1Q15050 365 aaKnown RBP34.94■■■■□ 3.18
CRNDE-206ENST00000559432 POLR3GLQ9BT43 218 aa34.94■■■■□ 3.18
CRNDE-206ENST00000559432 LRP5O75197 1615 aa34.94■■■■□ 3.18
CRNDE-206ENST00000559432 NUP188Q5SRE5 1749 aa34.94■■■■□ 3.18
CRNDE-206ENST00000559432 KIF20BQ96Q89 1820 aa34.93■■■■□ 3.18
CRNDE-206ENST00000559432 NSD3Q9BZ95 1437 aa34.93■■■■□ 3.18
CRNDE-206ENST00000559432 PTF1AQ7RTS3 328 aa34.93■■■■□ 3.18
CRNDE-206ENST00000559432 CARD14Q9BXL6 1004 aa34.93■■■■□ 3.18
CRNDE-206ENST00000559432 RGPD3A6NKT7 1758 aaPredicted RBP34.9■■■■□ 3.18
CRNDE-206ENST00000559432 RGPD4Q7Z3J3 1758 aa34.9■■■■□ 3.18
CRNDE-206ENST00000559432 HSPA5P11021 654 aaKnown RBP34.88■■■■□ 3.17
CRNDE-206ENST00000559432 SRCAPQ6ZRS2 3230 aa34.87■■■■□ 3.17
CRNDE-206ENST00000559432 SMG6Q86US8 1419 aaKnown RBP34.87■■■■□ 3.17
CRNDE-206ENST00000559432 ACSBG1Q96GR2 724 aa34.85■■■■□ 3.17
CRNDE-206ENST00000559432 KCNQ2O43526 872 aa34.84■■■■□ 3.17
CRNDE-206ENST00000559432 CGNL1Q0VF96 1302 aa34.82■■■■□ 3.17
CRNDE-206ENST00000559432 DDX54Q8TDD1 881 aaKnown RBP34.82■■■■□ 3.16
CRNDE-206ENST00000559432 KIF24Q5T7B8 1368 aa34.82■■■■□ 3.16
CRNDE-206ENST00000559432 FLT4P35916 1363 aa34.81■■■■□ 3.16
CRNDE-206ENST00000559432 NHSQ6T4R5 1651 aa34.81■■■■□ 3.16
CRNDE-206ENST00000559432 INSRP06213 1382 aa34.79■■■■□ 3.16
CRNDE-206ENST00000559432 HSP90AB2PQ58FF8 381 aa34.78■■■■□ 3.16
CRNDE-206ENST00000559432 NBPF6Q5VWK0 638 aa34.78■■■■□ 3.16
CRNDE-206ENST00000559432 NBPF4Q96M43 638 aa34.78■■■■□ 3.16
CRNDE-206ENST00000559432 TXNRD1Q16881 649 aa34.77■■■■□ 3.16
CRNDE-206ENST00000559432 PROM2Q8N271 834 aa34.77■■■■□ 3.16
CRNDE-206ENST00000559432 RGPD2P0DJD1 1756 aa34.75■■■■□ 3.15
CRNDE-206ENST00000559432 ZCRB1Q8TBF4 217 aaKnown RBP34.75■■■■□ 3.15
CRNDE-206ENST00000559432 USHBP1Q8N6Y0 703 aa34.74■■■■□ 3.15
CRNDE-206ENST00000559432 RAPGEF4Q8WZA2 1011 aa34.74■■■■□ 3.15
CRNDE-206ENST00000559432 EMILIN1Q9Y6C2 1016 aa34.74■■■■□ 3.15
CRNDE-206ENST00000559432 MEGF6O75095 1541 aa34.73■■■■□ 3.15
CRNDE-206ENST00000559432 PPM1GO15355 546 aaPredicted RBP34.73■■■■□ 3.15
CRNDE-206ENST00000559432 ANO8Q9HCE9 1232 aaPredicted RBP34.72■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms