RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 CPSF1Q10570 1443 aaKnown RBP8.37□□□□□ -1.07
USP3-212ENST00000559276 NLRP6P59044 892 aa8.36□□□□□ -1.07
USP3-212ENST00000559276 PDE3BQ13370 1112 aa8.36□□□□□ -1.07
USP3-212ENST00000559276 DIEXFQ68CQ4 756 aaKnown RBP8.36□□□□□ -1.07
USP3-212ENST00000559276 CD163L1Q9NR16 1453 aa8.36□□□□□ -1.07
USP3-212ENST00000559276 USP54Q70EL1 1684 aa8.36□□□□□ -1.07
USP3-212ENST00000559276 TTC21BQ7Z4L5 1316 aa8.35□□□□□ -1.07
USP3-212ENST00000559276 ARHGEF25Q86VW2 580 aa8.35□□□□□ -1.07
USP3-212ENST00000559276 EVC2Q86UK5 1308 aa8.34□□□□□ -1.07
USP3-212ENST00000559276 MARCH10Q8NA82 808 aaPredicted RBP8.34□□□□□ -1.07
USP3-212ENST00000559276 CASZ1Q86V15 1759 aa8.34□□□□□ -1.07
USP3-212ENST00000559276 OVOS2A0A0G2JMS6 1433 aa8.34□□□□□ -1.07
USP3-212ENST00000559276 OVOS2A0A0J9YW53 1432 aa8.34□□□□□ -1.07
USP3-212ENST00000559276 OVOS2Q6IE36 1432 aa8.34□□□□□ -1.07
USP3-212ENST00000559276 ROCK2O75116 1388 aaKnown RBP8.34□□□□□ -1.07
USP3-212ENST00000559276 WDR17Q8IZU2 1322 aa8.33□□□□□ -1.08
USP3-212ENST00000559276 CLSPNQ9HAW4 1339 aa8.33□□□□□ -1.08
USP3-212ENST00000559276 ZBTB7CA1YPR0 619 aa8.33□□□□□ -1.08
USP3-212ENST00000559276 BCL9O00512 1426 aa8.33□□□□□ -1.08
USP3-212ENST00000559276 PROM2Q8N271 834 aa8.33□□□□□ -1.08
USP3-212ENST00000559276 SBNO2Q9Y2G9 1366 aa8.33□□□□□ -1.08
USP3-212ENST00000559276 PLSCR1O15162 318 aa8.32□□□□□ -1.08
USP3-212ENST00000559276 NEUROD1Q13562 356 aa8.32□□□□□ -1.08
USP3-212ENST00000559276 TOM1L2Q6ZVM7 507 aa8.32□□□□□ -1.08
USP3-212ENST00000559276 ZNF692Q9BU19 519 aaPredicted RBP8.32□□□□□ -1.08
USP3-212ENST00000559276 ANO8Q9HCE9 1232 aaPredicted RBP8.32□□□□□ -1.08
USP3-212ENST00000559276 ABCC6O95255 1503 aa8.32□□□□□ -1.08
USP3-212ENST00000559276 LTN1O94822 1766 aa8.32□□□□□ -1.08
USP3-212ENST00000559276 TTC21AQ8NDW8 1320 aa8.31□□□□□ -1.08
USP3-212ENST00000559276 DDB1Q16531 1140 aa8.31□□□□□ -1.08
USP3-212ENST00000559276 PDGFDQ9GZP0 370 aaPredicted RBP8.31□□□□□ -1.08
USP3-212ENST00000559276 USP31Q70CQ4 1352 aa8.31□□□□□ -1.08
USP3-212ENST00000559276 KTN1Q86UP2 1357 aaKnown RBP8.31□□□□□ -1.08
USP3-212ENST00000559276 SOX12O15370 315 aa8.3□□□□□ -1.08
USP3-212ENST00000559276 KCNH5Q8NCM2 988 aa8.3□□□□□ -1.08
USP3-212ENST00000559276 CARD10Q9BWT7 1032 aa8.3□□□□□ -1.08
USP3-212ENST00000559276 BCL11BQ9C0K0 894 aaPredicted RBP8.3□□□□□ -1.08
USP3-212ENST00000559276 NHSQ6T4R5 1651 aa8.3□□□□□ -1.08
USP3-212ENST00000559276 ZNF316A6NFI3 1004 aaPredicted RBP8.29□□□□□ -1.08
USP3-212ENST00000559276 C11orf95C9JLR9 678 aaPredicted RBP8.29□□□□□ -1.08
USP3-212ENST00000559276 NBPF14Q5TI25 921 aa8.29□□□□□ -1.08
USP3-212ENST00000559276 NME9Q86XW9 330 aa8.29□□□□□ -1.08
USP3-212ENST00000559276 PAPPAQ13219 1627 aa8.29□□□□□ -1.08
USP3-212ENST00000559276 TNS2Q63HR2 1409 aa8.29□□□□□ -1.08
USP3-212ENST00000559276 KCNQ2O43526 872 aa8.28□□□□□ -1.08
USP3-212ENST00000559276 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.28□□□□□ -1.08
USP3-212ENST00000559276 CDCA7Q9BWT1 371 aaPredicted RBP8.28□□□□□ -1.08
USP3-212ENST00000559276 SLC12A5Q9H2X9 1139 aa8.28□□□□□ -1.08
USP3-212ENST00000559276 ERBB3P21860 1342 aa8.28□□□□□ -1.08
USP3-212ENST00000559276 MYOM1P52179 1685 aa8.27□□□□□ -1.08
USP3-212ENST00000559276 A0A1W2PP64 1363 aa8.27□□□□□ -1.09
USP3-212ENST00000559276 CCDC7Q96M83 1385 aa8.27□□□□□ -1.09
USP3-212ENST00000559276 TESK2Q96S53 571 aa8.27□□□□□ -1.09
USP3-212ENST00000559276 SPON1Q9HCB6 807 aa8.27□□□□□ -1.09
USP3-212ENST00000559276 RTN4Q9NQC3 1192 aaKnown RBP8.27□□□□□ -1.09
USP3-212ENST00000559276 BTAF1O14981 1849 aa8.26□□□□□ -1.09
USP3-212ENST00000559276 SHANK3Q9BYB0 1731 aa8.26□□□□□ -1.09
USP3-212ENST00000559276 CSB-PGBD3P0DP91 1061 aa8.26□□□□□ -1.09
USP3-212ENST00000559276 PTGER2P43116 358 aa8.26□□□□□ -1.09
USP3-212ENST00000559276 TXNRD1Q16881 649 aa8.26□□□□□ -1.09
USP3-212ENST00000559276 CARD11Q9BXL7 1154 aa8.26□□□□□ -1.09
USP3-212ENST00000559276 GTF3C3Q9Y5Q9 886 aa8.26□□□□□ -1.09
USP3-212ENST00000559276 FAM208AQ9UK61 1670 aaKnown RBP8.26□□□□□ -1.09
USP3-212ENST00000559276 EDC4Q6P2E9 1401 aaKnown RBP8.26□□□□□ -1.09
USP3-212ENST00000559276 UTRNP46939 3433 aa8.26□□□□□ -1.09
USP3-212ENST00000559276 RGPD2P0DJD1 1756 aa8.25□□□□□ -1.09
USP3-212ENST00000559276 NINLQ9Y2I6 1382 aa8.25□□□□□ -1.09
USP3-212ENST00000559276 EXOC5O00471 708 aa8.25□□□□□ -1.09
USP3-212ENST00000559276 SGIP1Q9BQI5 828 aa8.25□□□□□ -1.09
USP3-212ENST00000559276 ZBTB7AO95365 584 aa8.24□□□□□ -1.09
USP3-212ENST00000559276 AMER1Q5JTC6 1135 aaPredicted RBP8.24□□□□□ -1.09
USP3-212ENST00000559276 TMC1Q8TDI8 760 aa8.24□□□□□ -1.09
USP3-212ENST00000559276 ANKRD24Q8TF21 1146 aa8.24□□□□□ -1.09
USP3-212ENST00000559276 PUS7Q96PZ0 661 aaKnown RBP8.24□□□□□ -1.09
USP3-212ENST00000559276 NLRP2Q9NX02 1062 aa8.24□□□□□ -1.09
USP3-212ENST00000559276 COL24A1Q17RW2 1714 aa8.23□□□□□ -1.09
USP3-212ENST00000559276 IL2RBP14784 551 aa8.23□□□□□ -1.09
USP3-212ENST00000559276 KCNA4P22459 653 aa8.23□□□□□ -1.09
USP3-212ENST00000559276 FBLN1P23142 703 aa8.23□□□□□ -1.09
USP3-212ENST00000559276 SLC15A2Q16348 729 aa8.23□□□□□ -1.09
USP3-212ENST00000559276 ACSBG1Q96GR2 724 aa8.23□□□□□ -1.09
USP3-212ENST00000559276 LRRC4BQ9NT99 713 aa8.23□□□□□ -1.09
USP3-212ENST00000559276 TUBGCP6Q96RT7 1819 aa8.22□□□□□ -1.09
USP3-212ENST00000559276 ST20-MTHFSA0A0A6YYL1 179 aa8.22□□□□□ -1.09
USP3-212ENST00000559276 ZNF827Q17R98 1081 aa8.22□□□□□ -1.09
USP3-212ENST00000559276 HDGFL2Q7Z4V5 671 aaPredicted RBP8.22□□□□□ -1.09
USP3-212ENST00000559276 IP6K1Q92551 441 aa8.22□□□□□ -1.09
USP3-212ENST00000559276 ATF5Q9Y2D1 282 aaPredicted RBP8.22□□□□□ -1.09
USP3-212ENST00000559276 QSER1Q2KHR3 1735 aa8.22□□□□□ -1.09
USP3-212ENST00000559276 TONSLQ96HA7 1378 aa8.22□□□□□ -1.09
USP3-212ENST00000559276 LY75O60449 1722 aa8.21□□□□□ -1.09
USP3-212ENST00000559276 DOT1LQ8TEK3 1739 aa8.21□□□□□ -1.09
USP3-212ENST00000559276 TERF2IPQ9NYB0 399 aa8.21□□□□□ -1.1
USP3-212ENST00000559276 PPP1R1BQ9UD71 204 aaPredicted RBP8.21□□□□□ -1.1
USP3-212ENST00000559276 MAP3K19Q56UN5 1328 aa8.21□□□□□ -1.1
USP3-212ENST00000559276 NSD2O96028 1365 aa8.21□□□□□ -1.1
USP3-212ENST00000559276 MEGF6O75095 1541 aa8.2□□□□□ -1.1
USP3-212ENST00000559276 YY1P25490 414 aa8.2□□□□□ -1.1
USP3-212ENST00000559276 AKT1S1Q96B36 256 aa8.2□□□□□ -1.1
USP3-212ENST00000559276 STK32BQ9NY57 414 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms