RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 AFF2P51816 1311 aa16.88■□□□□ 0.29
GABPB1-208ENST00000558970 NPC1L1Q9UHC9 1359 aa16.88■□□□□ 0.29
GABPB1-208ENST00000558970 AMPHP49418 695 aa16.87■□□□□ 0.29
GABPB1-208ENST00000558970 ARHGEF25Q86VW2 580 aa16.87■□□□□ 0.29
GABPB1-208ENST00000558970 BTG4Q9NY30 223 aa16.87■□□□□ 0.29
GABPB1-208ENST00000558970 CAMTA1Q9Y6Y1 1673 aa16.87■□□□□ 0.29
GABPB1-208ENST00000558970 CPDO75976 1380 aa16.87■□□□□ 0.29
GABPB1-208ENST00000558970 LTV1Q96GA3 475 aaPredicted RBP16.86■□□□□ 0.29
GABPB1-208ENST00000558970 STRN4Q9NRL3 753 aa16.86■□□□□ 0.29
GABPB1-208ENST00000558970 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.86■□□□□ 0.29
GABPB1-208ENST00000558970 AXIN2Q9Y2T1 843 aa16.85■□□□□ 0.29
GABPB1-208ENST00000558970 POLKQ9UBT6 870 aa16.84■□□□□ 0.29
GABPB1-208ENST00000558970 AATKQ6ZMQ8 1374 aa16.84■□□□□ 0.29
GABPB1-208ENST00000558970 PARD3Q8TEW0 1356 aa16.84■□□□□ 0.29
GABPB1-208ENST00000558970 SLIT2O94813 1529 aa16.84■□□□□ 0.29
GABPB1-208ENST00000558970 COL5A2P05997 1499 aaPredicted RBP16.83■□□□□ 0.28
GABPB1-208ENST00000558970 HOXC9P31274 260 aa16.83■□□□□ 0.28
GABPB1-208ENST00000558970 USP21Q9UK80 565 aa16.83■□□□□ 0.28
GABPB1-208ENST00000558970 FLT4P35916 1363 aa16.82■□□□□ 0.28
GABPB1-208ENST00000558970 EVA1CP58658 441 aa16.82■□□□□ 0.28
GABPB1-208ENST00000558970 CCDC9Q9Y3X0 531 aaKnown RBP16.82■□□□□ 0.28
GABPB1-208ENST00000558970 FAM208AQ9UK61 1670 aaKnown RBP16.81■□□□□ 0.28
GABPB1-208ENST00000558970 ABCC6O95255 1503 aa16.81■□□□□ 0.28
GABPB1-208ENST00000558970 BCL9LQ86UU0 1499 aa16.81■□□□□ 0.28
GABPB1-208ENST00000558970 RTL1A6NKG5 1358 aa16.81■□□□□ 0.28
GABPB1-208ENST00000558970 CSB-PGBD3P0DP91 1061 aa16.81■□□□□ 0.28
GABPB1-208ENST00000558970 PPP2R1AP30153 589 aa16.81■□□□□ 0.28
GABPB1-208ENST00000558970 MTHFSP49914 203 aa16.81■□□□□ 0.28
GABPB1-208ENST00000558970 RBM6P78332 1123 aaKnown RBP16.81■□□□□ 0.28
GABPB1-208ENST00000558970 HSP90AB2PQ58FF8 381 aa16.81■□□□□ 0.28
GABPB1-208ENST00000558970 SMG6Q86US8 1419 aaKnown RBP16.8■□□□□ 0.28
GABPB1-208ENST00000558970 ANP32CO43423 234 aa16.8■□□□□ 0.28
GABPB1-208ENST00000558970 IP6K1Q92551 441 aa16.8■□□□□ 0.28
GABPB1-208ENST00000558970 PRKRIP1Q9H875 184 aaPredicted RBP16.8■□□□□ 0.28
GABPB1-208ENST00000558970 USP35Q9P2H5 1018 aa16.8■□□□□ 0.28
GABPB1-208ENST00000558970 RALBP1Q15311 655 aa16.79■□□□□ 0.28
GABPB1-208ENST00000558970 DIEXFQ68CQ4 756 aaKnown RBP16.79■□□□□ 0.28
GABPB1-208ENST00000558970 ANKRD24Q8TF21 1146 aa16.79■□□□□ 0.28
GABPB1-208ENST00000558970 QTRT2Q9H974 415 aaKnown RBP16.79■□□□□ 0.28
GABPB1-208ENST00000558970 WNK3Q9BYP7 1800 aa16.79■□□□□ 0.28
GABPB1-208ENST00000558970 BLMP54132 1417 aaPredicted RBP16.79■□□□□ 0.28
GABPB1-208ENST00000558970 LARP1Q6PKG0 1096 aaKnown RBP16.78■□□□□ 0.28
GABPB1-208ENST00000558970 UNC5CLQ8IV45 518 aa16.78■□□□□ 0.28
GABPB1-208ENST00000558970 FNBP4Q8N3X1 1017 aaPredicted RBP16.78■□□□□ 0.28
GABPB1-208ENST00000558970 MYBBP1AQ9BQG0 1328 aaKnown RBP16.77■□□□□ 0.28
GABPB1-208ENST00000558970 TOM1L2Q6ZVM7 507 aa16.77■□□□□ 0.28
GABPB1-208ENST00000558970 ERBB3P21860 1342 aa16.76■□□□□ 0.27
GABPB1-208ENST00000558970 GLI3P10071 1580 aa16.76■□□□□ 0.27
GABPB1-208ENST00000558970 INSRP06213 1382 aa16.76■□□□□ 0.27
GABPB1-208ENST00000558970 USHBP1Q8N6Y0 703 aa16.75■□□□□ 0.27
GABPB1-208ENST00000558970 NLRP2Q9NX02 1062 aa16.75■□□□□ 0.27
GABPB1-208ENST00000558970 SRCAPQ6ZRS2 3230 aa16.75■□□□□ 0.27
GABPB1-208ENST00000558970 KIF24Q5T7B8 1368 aa16.75■□□□□ 0.27
GABPB1-208ENST00000558970 COL3A1P02461 1466 aaPredicted RBP16.74■□□□□ 0.27
GABPB1-208ENST00000558970 WDR17Q8IZU2 1322 aa16.74■□□□□ 0.27
GABPB1-208ENST00000558970 CRB1P82279 1406 aa16.74■□□□□ 0.27
GABPB1-208ENST00000558970 EIF4A2Q14240 407 aaKnown RBP16.74■□□□□ 0.27
GABPB1-208ENST00000558970 ATRNO75882 1429 aa16.73■□□□□ 0.27
GABPB1-208ENST00000558970 CFAP53Q96M91 514 aa16.73■□□□□ 0.27
GABPB1-208ENST00000558970 TRPC5Q9UL62 973 aaPredicted RBP16.73■□□□□ 0.27
GABPB1-208ENST00000558970 RGPD1P0DJD0 1748 aa16.73■□□□□ 0.27
GABPB1-208ENST00000558970 RGS12O14924 1447 aa16.72■□□□□ 0.27
GABPB1-208ENST00000558970 A0A0G2JS52 829 aa16.72■□□□□ 0.27
GABPB1-208ENST00000558970 MYT1Q01538 1121 aa16.72■□□□□ 0.27
GABPB1-208ENST00000558970 DIAPH1O60610 1272 aaKnown RBP16.71■□□□□ 0.27
GABPB1-208ENST00000558970 VPS72Q15906 364 aa16.71■□□□□ 0.27
GABPB1-208ENST00000558970 U2SURPO15042 1029 aaKnown RBP16.7■□□□□ 0.26
GABPB1-208ENST00000558970 NBPF6Q5VWK0 638 aa16.7■□□□□ 0.26
GABPB1-208ENST00000558970 NBPF4Q96M43 638 aa16.7■□□□□ 0.26
GABPB1-208ENST00000558970 BRWD3Q6RI45 1802 aa16.7■□□□□ 0.26
GABPB1-208ENST00000558970 PARP4Q9UKK3 1724 aaKnown RBP16.7■□□□□ 0.26
GABPB1-208ENST00000558970 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
GABPB1-208ENST00000558970 SPATA31A5Q5VU36 1347 aa16.7■□□□□ 0.26
GABPB1-208ENST00000558970 SPATA31A7Q8IWB4 1347 aa16.7■□□□□ 0.26
GABPB1-208ENST00000558970 FAM98CQ17RN3 349 aaKnown RBP16.69■□□□□ 0.26
GABPB1-208ENST00000558970 CCDC184Q52MB2 194 aa16.69■□□□□ 0.26
GABPB1-208ENST00000558970 GJD4Q96KN9 370 aaPredicted RBP16.69■□□□□ 0.26
GABPB1-208ENST00000558970 EYA1Q99502 592 aa16.68■□□□□ 0.26
GABPB1-208ENST00000558970 HMOX1P09601 288 aa16.67■□□□□ 0.26
GABPB1-208ENST00000558970 IL13P35225 146 aa16.67■□□□□ 0.26
GABPB1-208ENST00000558970 LRRC37A3O60309 1634 aa16.67■□□□□ 0.26
GABPB1-208ENST00000558970 AEBP1Q8IUX7 1158 aa16.66■□□□□ 0.26
GABPB1-208ENST00000558970 TCP11L2Q8N4U5 519 aa16.66■□□□□ 0.26
GABPB1-208ENST00000558970 CARD10Q9BWT7 1032 aa16.66■□□□□ 0.26
GABPB1-208ENST00000558970 THSD7AQ9UPZ6 1657 aa16.65■□□□□ 0.26
GABPB1-208ENST00000558970 MIER1Q8N108 512 aa16.65■□□□□ 0.26
GABPB1-208ENST00000558970 MRS2Q9HD23 443 aa16.65■□□□□ 0.26
GABPB1-208ENST00000558970 MEGF6O75095 1541 aa16.65■□□□□ 0.26
GABPB1-208ENST00000558970 SHANK3Q9BYB0 1731 aa16.65■□□□□ 0.26
GABPB1-208ENST00000558970 SULT6B1Q6IMI4 303 aa16.64■□□□□ 0.25
GABPB1-208ENST00000558970 CCDC125Q86Z20 511 aa16.64■□□□□ 0.25
GABPB1-208ENST00000558970 IGSF1Q8N6C5 1336 aa16.64■□□□□ 0.25
GABPB1-208ENST00000558970 U2AF1L5P0DN76 240 aaPredicted RBP16.63■□□□□ 0.25
GABPB1-208ENST00000558970 U2AF1Q01081 240 aaKnown RBP eCLIP16.63■□□□□ 0.25
GABPB1-208ENST00000558970 NUDCQ9Y266 331 aa16.63■□□□□ 0.25
GABPB1-208ENST00000558970 VIRMAQ69YN4 1812 aaKnown RBP16.61■□□□□ 0.25
GABPB1-208ENST00000558970 IL2RBP14784 551 aa16.61■□□□□ 0.25
GABPB1-208ENST00000558970 RAPGEF4Q8WZA2 1011 aa16.61■□□□□ 0.25
GABPB1-208ENST00000558970 PKD1L3Q7Z443 1732 aa16.61■□□□□ 0.25
GABPB1-208ENST00000558970 WDR43Q15061 677 aaKnown RBP eCLIP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 529 ms