RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 NME9Q86XW9 330 aa14.3□□□□□ -0.12
TPM1-212ENST00000558347 KCNH5Q8NCM2 988 aa14.3□□□□□ -0.12
TPM1-212ENST00000558347 AXIN2Q9Y2T1 843 aa14.3□□□□□ -0.12
TPM1-212ENST00000558347 USP31Q70CQ4 1352 aa14.3□□□□□ -0.12
TPM1-212ENST00000558347 EDC4Q6P2E9 1401 aaKnown RBP14.3□□□□□ -0.12
TPM1-212ENST00000558347 DEFB132Q7Z7B7 95 aa14.29□□□□□ -0.12
TPM1-212ENST00000558347 CRB1P82279 1406 aa14.28□□□□□ -0.12
TPM1-212ENST00000558347 TCP11L2Q8N4U5 519 aa14.28□□□□□ -0.12
TPM1-212ENST00000558347 TERF2IPQ9NYB0 399 aa14.28□□□□□ -0.12
TPM1-212ENST00000558347 NINLQ9Y2I6 1382 aa14.27□□□□□ -0.12
TPM1-212ENST00000558347 SLC24A1O60721 1099 aa14.26□□□□□ -0.13
TPM1-212ENST00000558347 THRAP3Q9Y2W1 955 aaKnown RBP14.26□□□□□ -0.13
TPM1-212ENST00000558347 RGPD1P0DJD0 1748 aa14.26□□□□□ -0.13
TPM1-212ENST00000558347 PARP4Q9UKK3 1724 aaKnown RBP14.26□□□□□ -0.13
TPM1-212ENST00000558347 TMF1P82094 1093 aa14.25□□□□□ -0.13
TPM1-212ENST00000558347 SF3B2Q13435 895 aaKnown RBP14.25□□□□□ -0.13
TPM1-212ENST00000558347 LTN1O94822 1766 aa14.25□□□□□ -0.13
TPM1-212ENST00000558347 OVOS2A0A0J9YW53 1432 aa14.25□□□□□ -0.13
TPM1-212ENST00000558347 OVOS2Q6IE36 1432 aa14.25□□□□□ -0.13
TPM1-212ENST00000558347 TNS1Q9HBL0 1735 aaKnown RBP14.25□□□□□ -0.13
TPM1-212ENST00000558347 WDR17Q8IZU2 1322 aa14.25□□□□□ -0.13
TPM1-212ENST00000558347 WNK3Q9BYP7 1800 aa14.25□□□□□ -0.13
TPM1-212ENST00000558347 SRCAPQ6ZRS2 3230 aa14.24□□□□□ -0.13
TPM1-212ENST00000558347 ABCC6O95255 1503 aa14.24□□□□□ -0.13
TPM1-212ENST00000558347 TOM1L2Q6ZVM7 507 aa14.24□□□□□ -0.13
TPM1-212ENST00000558347 ANKRD36BQ8N2N9 1353 aa14.23□□□□□ -0.13
TPM1-212ENST00000558347 LRRC37A3O60309 1634 aa14.23□□□□□ -0.13
TPM1-212ENST00000558347 PDE3BQ13370 1112 aa14.22□□□□□ -0.13
TPM1-212ENST00000558347 BAG6P46379 1132 aa14.21□□□□□ -0.13
TPM1-212ENST00000558347 EIF4G2P78344 907 aaKnown RBP eCLIP14.21□□□□□ -0.13
TPM1-212ENST00000558347 FAM196AQ6ZSG2 479 aa14.21□□□□□ -0.13
TPM1-212ENST00000558347 MYOM1P52179 1685 aa14.21□□□□□ -0.13
TPM1-212ENST00000558347 CSB-PGBD3P0DP91 1061 aa14.2□□□□□ -0.14
TPM1-212ENST00000558347 PEAK1Q9H792 1746 aa14.2□□□□□ -0.14
TPM1-212ENST00000558347 TRIM37O94972 964 aa14.2□□□□□ -0.14
TPM1-212ENST00000558347 EN1Q05925 392 aaPredicted RBP14.2□□□□□ -0.14
TPM1-212ENST00000558347 CARD10Q9BWT7 1032 aa14.2□□□□□ -0.14
TPM1-212ENST00000558347 ERBB3P21860 1342 aa14.19□□□□□ -0.14
TPM1-212ENST00000558347 DISP2A7MBM2 1401 aa14.19□□□□□ -0.14
TPM1-212ENST00000558347 HSPA5P11021 654 aaKnown RBP14.18□□□□□ -0.14
TPM1-212ENST00000558347 DDB1Q16531 1140 aa14.18□□□□□ -0.14
TPM1-212ENST00000558347 CDCA8Q53HL2 280 aa14.18□□□□□ -0.14
TPM1-212ENST00000558347 COG3Q96JB2 828 aa14.18□□□□□ -0.14
TPM1-212ENST00000558347 YTHDC1Q96MU7 727 aaKnown RBP14.18□□□□□ -0.14
TPM1-212ENST00000558347 FBLN1P23142 703 aa14.17□□□□□ -0.14
TPM1-212ENST00000558347 KIF20BQ96Q89 1820 aa14.16□□□□□ -0.14
TPM1-212ENST00000558347 CCDC7Q96M83 1385 aa14.16□□□□□ -0.14
TPM1-212ENST00000558347 FYB1O15117 783 aa14.16□□□□□ -0.14
TPM1-212ENST00000558347 EZH2Q15910 746 aaKnown RBP14.16□□□□□ -0.14
TPM1-212ENST00000558347 ANKRD24Q8TF21 1146 aa14.16□□□□□ -0.14
TPM1-212ENST00000558347 OVOS2A0A0G2JMS6 1433 aa14.16□□□□□ -0.14
TPM1-212ENST00000558347 SBF2Q86WG5 1849 aa14.16□□□□□ -0.14
TPM1-212ENST00000558347 CDCA7Q9BWT1 371 aaPredicted RBP14.15□□□□□ -0.14
TPM1-212ENST00000558347 GGNBP2Q9H3C7 697 aa14.15□□□□□ -0.14
TPM1-212ENST00000558347 APBA3O96018 575 aa14.15□□□□□ -0.14
TPM1-212ENST00000558347 IP6K1Q92551 441 aa14.15□□□□□ -0.14
TPM1-212ENST00000558347 CAMKK2Q96RR4 588 aa14.15□□□□□ -0.14
TPM1-212ENST00000558347 NLRP2Q9NX02 1062 aa14.15□□□□□ -0.14
TPM1-212ENST00000558347 MAP3K19Q56UN5 1328 aa14.14□□□□□ -0.15
TPM1-212ENST00000558347 MARCH10Q8NA82 808 aaPredicted RBP14.14□□□□□ -0.15
TPM1-212ENST00000558347 CARD14Q9BXL6 1004 aa14.14□□□□□ -0.15
TPM1-212ENST00000558347 NSD3Q9BZ95 1437 aa14.13□□□□□ -0.15
TPM1-212ENST00000558347 RREB1Q92766 1687 aa14.13□□□□□ -0.15
TPM1-212ENST00000558347 TNS2Q63HR2 1409 aa14.12□□□□□ -0.15
TPM1-212ENST00000558347 FAM208AQ9UK61 1670 aaKnown RBP14.12□□□□□ -0.15
TPM1-212ENST00000558347 HOXC9P31274 260 aa14.12□□□□□ -0.15
TPM1-212ENST00000558347 RRS1Q15050 365 aaKnown RBP14.12□□□□□ -0.15
TPM1-212ENST00000558347 RGPD2P0DJD1 1756 aa14.11□□□□□ -0.15
TPM1-212ENST00000558347 PSDA5PKW4 1024 aaPredicted RBP14.11□□□□□ -0.15
TPM1-212ENST00000558347 C11orf95C9JLR9 678 aaPredicted RBP14.11□□□□□ -0.15
TPM1-212ENST00000558347 EXOC5O00471 708 aa14.11□□□□□ -0.15
TPM1-212ENST00000558347 PTF1AQ7RTS3 328 aa14.11□□□□□ -0.15
TPM1-212ENST00000558347 LTV1Q96GA3 475 aaPredicted RBP14.11□□□□□ -0.15
TPM1-212ENST00000558347 NUP188Q5SRE5 1749 aa14.11□□□□□ -0.15
TPM1-212ENST00000558347 AMPHP49418 695 aa14.1□□□□□ -0.15
TPM1-212ENST00000558347 POLR3GLQ9BT43 218 aa14.1□□□□□ -0.15
TPM1-212ENST00000558347 PARD3Q8TEW0 1356 aa14.1□□□□□ -0.15
TPM1-212ENST00000558347 BCL9O00512 1426 aa14.1□□□□□ -0.15
TPM1-212ENST00000558347 IL2RBP14784 551 aa14.1□□□□□ -0.15
TPM1-212ENST00000558347 RTL1A6NKG5 1358 aa14.09□□□□□ -0.15
TPM1-212ENST00000558347 RGPD3A6NKT7 1758 aaPredicted RBP14.08□□□□□ -0.16
TPM1-212ENST00000558347 RGPD4Q7Z3J3 1758 aa14.08□□□□□ -0.16
TPM1-212ENST00000558347 R3HDM1Q15032 1099 aaKnown RBP14.07□□□□□ -0.16
TPM1-212ENST00000558347 BCL11BQ9C0K0 894 aaPredicted RBP14.07□□□□□ -0.16
TPM1-212ENST00000558347 PLSCR1O15162 318 aa14.05□□□□□ -0.16
TPM1-212ENST00000558347 NHSQ6T4R5 1651 aa14.05□□□□□ -0.16
TPM1-212ENST00000558347 LRP5O75197 1615 aa14.05□□□□□ -0.16
TPM1-212ENST00000558347 WASHC2AQ641Q2 1341 aa14.05□□□□□ -0.16
TPM1-212ENST00000558347 KCNQ2O43526 872 aa14.05□□□□□ -0.16
TPM1-212ENST00000558347 HSP90AB2PQ58FF8 381 aa14.05□□□□□ -0.16
TPM1-212ENST00000558347 NBPF6Q5VWK0 638 aa14.05□□□□□ -0.16
TPM1-212ENST00000558347 NBPF4Q96M43 638 aa14.05□□□□□ -0.16
TPM1-212ENST00000558347 EMILIN1Q9Y6C2 1016 aa14.05□□□□□ -0.16
TPM1-212ENST00000558347 MEGF6O75095 1541 aa14.04□□□□□ -0.16
TPM1-212ENST00000558347 SHANK3Q9BYB0 1731 aa14.04□□□□□ -0.16
TPM1-212ENST00000558347 ANKRD26Q9UPS8 1709 aa14.04□□□□□ -0.16
TPM1-212ENST00000558347 FLT4P35916 1363 aa14.04□□□□□ -0.16
TPM1-212ENST00000558347 CGNL1Q0VF96 1302 aa14.04□□□□□ -0.16
TPM1-212ENST00000558347 ACSBG1Q96GR2 724 aa14.04□□□□□ -0.16
TPM1-212ENST00000558347 INSRP06213 1382 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms