RNA–Protein interactions for RNA: ENST00000558180.2

IRX3-203, Transcript of iroquois homeobox 3, humanhuman

TSL 4

Gene IRX3, Length 1,540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3-203ENST00000558180 IL13P35225 146 aa38.29■■■■□ 3.72
IRX3-203ENST00000558180 NUDCQ9Y266 331 aa38.29■■■■□ 3.72
IRX3-203ENST00000558180 KIAA0232Q92628 1395 aa38.29■■■■□ 3.72
IRX3-203ENST00000558180 ADAMTS8Q9UP79 889 aa38.28■■■■□ 3.72
IRX3-203ENST00000558180 EIF4A2Q14240 407 aaKnown RBP38.28■■■■□ 3.72
IRX3-203ENST00000558180 JCADQ9P266 1359 aa38.26■■■■□ 3.72
IRX3-203ENST00000558180 AXIN2Q9Y2T1 843 aa38.23■■■■□ 3.71
IRX3-203ENST00000558180 U2SURPO15042 1029 aaKnown RBP38.22■■■■□ 3.71
IRX3-203ENST00000558180 CHRNA2Q15822 529 aa38.22■■■■□ 3.71
IRX3-203ENST00000558180 PRDM11Q9NQV5 511 aa38.22■■■■□ 3.71
IRX3-203ENST00000558180 BLMP54132 1417 aaPredicted RBP38.2■■■■□ 3.71
IRX3-203ENST00000558180 COL18A1P39060 1754 aa38.2■■■■□ 3.71
IRX3-203ENST00000558180 U2AF1L5P0DN76 240 aaPredicted RBP38.2■■■■□ 3.71
IRX3-203ENST00000558180 U2AF1Q01081 240 aaKnown RBP eCLIP38.2■■■■□ 3.71
IRX3-203ENST00000558180 ABCC6O95255 1503 aa38.18■■■■□ 3.7
IRX3-203ENST00000558180 LTV1Q96GA3 475 aaPredicted RBP38.17■■■■□ 3.7
IRX3-203ENST00000558180 FAM83GA6ND36 823 aa38.15■■■■□ 3.7
IRX3-203ENST00000558180 NUTM2BA6NNL0 878 aaPredicted RBP38.14■■■■□ 3.7
IRX3-203ENST00000558180 NUTM2EB1AL46 878 aaPredicted RBP38.14■■■■□ 3.7
IRX3-203ENST00000558180 NUTM2AQ8IVF1 878 aaPredicted RBP38.14■■■■□ 3.7
IRX3-203ENST00000558180 YTHDC1Q96MU7 727 aaKnown RBP38.13■■■■□ 3.69
IRX3-203ENST00000558180 ANKRD24Q8TF21 1146 aa38.12■■■■□ 3.69
IRX3-203ENST00000558180 EYA1Q99502 592 aa38.11■■■■□ 3.69
IRX3-203ENST00000558180 RGPD5Q99666 1765 aa38.11■■■■□ 3.69
IRX3-203ENST00000558180 LMO7Q8WWI1 1683 aa38.1■■■■□ 3.69
IRX3-203ENST00000558180 SPATA31A6Q5VVP1 1343 aa38.09■■■■□ 3.69
IRX3-203ENST00000558180 ADAMTS2O95450 1211 aa38.09■■■■□ 3.69
IRX3-203ENST00000558180 RGPD1P0DJD0 1748 aa38.09■■■■□ 3.69
IRX3-203ENST00000558180 ERBB3P21860 1342 aa38.08■■■■□ 3.69
IRX3-203ENST00000558180 CAMTA1Q9Y6Y1 1673 aa38.08■■■■□ 3.69
IRX3-203ENST00000558180 IGSF1Q8N6C5 1336 aa38.07■■■■□ 3.68
IRX3-203ENST00000558180 FCHSD2O94868 740 aa38.07■■■■□ 3.68
IRX3-203ENST00000558180 HMOX1P09601 288 aa38.07■■■■□ 3.68
IRX3-203ENST00000558180 CCDC146Q8IYE0 955 aa38.07■■■■□ 3.68
IRX3-203ENST00000558180 RSPH6AQ9H0K4 717 aa38.05■■■■□ 3.68
IRX3-203ENST00000558180 NBPF6Q5VWK0 638 aa38.04■■■■□ 3.68
IRX3-203ENST00000558180 SULT6B1Q6IMI4 303 aa38.04■■■■□ 3.68
IRX3-203ENST00000558180 FBXO41Q8TF61 875 aa38.04■■■■□ 3.68
IRX3-203ENST00000558180 NBPF4Q96M43 638 aa38.04■■■■□ 3.68
IRX3-203ENST00000558180 COL14A1Q05707 1796 aaKnown RBP38.03■■■■□ 3.68
IRX3-203ENST00000558180 AEBP1Q8IUX7 1158 aa38.02■■■■□ 3.68
IRX3-203ENST00000558180 RUNDC1Q96C34 613 aa38.02■■■■□ 3.68
IRX3-203ENST00000558180 PLEKHF1Q96S99 279 aa38.02■■■■□ 3.68
IRX3-203ENST00000558180 HNRNPUQ00839 825 aaKnown RBP eCLIP38.01■■■■□ 3.67
IRX3-203ENST00000558180 PNNQ9H307 717 aaKnown RBP38.01■■■■□ 3.67
IRX3-203ENST00000558180 COL5A2P05997 1499 aaPredicted RBP38■■■■□ 3.67
IRX3-203ENST00000558180 BTG4Q9NY30 223 aa38■■■■□ 3.67
IRX3-203ENST00000558180 CSB-PGBD3P0DP91 1061 aa37.98■■■■□ 3.67
IRX3-203ENST00000558180 PRKAR2BP31323 418 aa37.98■■■■□ 3.67
IRX3-203ENST00000558180 KDRP35968 1356 aa37.98■■■■□ 3.67
IRX3-203ENST00000558180 USHBP1Q8N6Y0 703 aa37.97■■■■□ 3.67
IRX3-203ENST00000558180 LRP6O75581 1613 aa37.96■■■■□ 3.67
IRX3-203ENST00000558180 RGPD2P0DJD1 1756 aa37.96■■■■□ 3.67
IRX3-203ENST00000558180 SENP3-EIF4A1A0A087X0R7 540 aa37.95■■■■□ 3.67
IRX3-203ENST00000558180 WDR17Q8IZU2 1322 aa37.95■■■■□ 3.67
IRX3-203ENST00000558180 EVA1CP58658 441 aa37.94■■■■□ 3.66
IRX3-203ENST00000558180 NLRP2Q9NX02 1062 aa37.94■■■■□ 3.66
IRX3-203ENST00000558180 NCAPD2Q15021 1401 aa37.93■■■■□ 3.66
IRX3-203ENST00000558180 APAF1O14727 1248 aa37.93■■■■□ 3.66
IRX3-203ENST00000558180 STRN4Q9NRL3 753 aa37.93■■■■□ 3.66
IRX3-203ENST00000558180 FAM208AQ9UK61 1670 aaKnown RBP37.9■■■■□ 3.66
IRX3-203ENST00000558180 TCP11L2Q8N4U5 519 aa37.9■■■■□ 3.66
IRX3-203ENST00000558180 PHACTR3Q96KR7 559 aa37.9■■■■□ 3.66
IRX3-203ENST00000558180 MAPK8IP3Q9UPT6 1336 aa37.89■■■■□ 3.66
IRX3-203ENST00000558180 LARP1Q6PKG0 1096 aaKnown RBP37.89■■■■□ 3.66
IRX3-203ENST00000558180 PLCH1Q4KWH8 1693 aa37.89■■■■□ 3.66
IRX3-203ENST00000558180 TOM1L2Q6ZVM7 507 aa37.88■■■■□ 3.65
IRX3-203ENST00000558180 NEFMP07197 916 aa37.87■■■■□ 3.65
IRX3-203ENST00000558180 C8orf37Q96NL8 207 aa37.87■■■■□ 3.65
IRX3-203ENST00000558180 SLIT2O94813 1529 aa37.87■■■■□ 3.65
IRX3-203ENST00000558180 NGLY1Q96IV0 654 aa37.86■■■■□ 3.65
IRX3-203ENST00000558180 CARD10Q9BWT7 1032 aa37.84■■■■□ 3.65
IRX3-203ENST00000558180 SALL2Q9Y467 1007 aaPredicted RBP37.83■■■■□ 3.65
IRX3-203ENST00000558180 MEX3CQ5U5Q3 659 aaKnown RBP37.82■■■■□ 3.65
IRX3-203ENST00000558180 RRP7AQ9Y3A4 280 aaKnown RBP37.82■■■■□ 3.64
IRX3-203ENST00000558180 CRB1P82279 1406 aa37.81■■■■□ 3.64
IRX3-203ENST00000558180 NWD2Q9ULI1 1742 aa37.81■■■■□ 3.64
IRX3-203ENST00000558180 TMPOP42166 694 aaKnown RBP37.81■■■■□ 3.64
IRX3-203ENST00000558180 NRAPQ86VF7 1730 aa37.81■■■■□ 3.64
IRX3-203ENST00000558180 FNBP4Q8N3X1 1017 aaPredicted RBP37.81■■■■□ 3.64
IRX3-203ENST00000558180 ZBED9Q6R2W3 1325 aa37.8■■■■□ 3.64
IRX3-203ENST00000558180 NGEFQ8N5V2 710 aa37.78■■■■□ 3.64
IRX3-203ENST00000558180 NEUROD2Q15784 382 aa37.77■■■■□ 3.64
IRX3-203ENST00000558180 NFE2L2Q16236 605 aa37.77■■■■□ 3.64
IRX3-203ENST00000558180 UNC5CLQ8IV45 518 aa37.77■■■■□ 3.64
IRX3-203ENST00000558180 NCBP3Q53F19 620 aaKnown RBP37.76■■■■□ 3.63
IRX3-203ENST00000558180 RAPGEF4Q8WZA2 1011 aa37.75■■■■□ 3.63
IRX3-203ENST00000558180 BCL9LQ86UU0 1499 aa37.75■■■■□ 3.63
IRX3-203ENST00000558180 RIPK4P57078 832 aa37.73■■■■□ 3.63
IRX3-203ENST00000558180 MTHFSDQ2M296 383 aaKnown RBP37.73■■■■□ 3.63
IRX3-203ENST00000558180 USP35Q9P2H5 1018 aa37.71■■■■□ 3.63
IRX3-203ENST00000558180 TATP17735 454 aaPredicted RBP37.71■■■■□ 3.63
IRX3-203ENST00000558180 MEGF6O75095 1541 aa37.7■■■■□ 3.63
IRX3-203ENST00000558180 CCDC27Q2M243 656 aa37.7■■■■□ 3.63
IRX3-203ENST00000558180 PHF23Q9BUL5 403 aaPredicted RBP37.7■■■■□ 3.63
IRX3-203ENST00000558180 USP21Q9UK80 565 aa37.7■■■■□ 3.63
IRX3-203ENST00000558180 PLEKHO1Q53GL0 409 aaPredicted RBP37.69■■■■□ 3.62
IRX3-203ENST00000558180 GAS2L2Q8NHY3 880 aa37.69■■■■□ 3.62
IRX3-203ENST00000558180 ZNF521Q96K83 1311 aa37.68■■■■□ 3.62
IRX3-203ENST00000558180 AMOTQ4VCS5 1084 aa37.67■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms