RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 WDR4P57081 412 aaKnown RBP7.19□□□□□ -1.26
SPG11-206ENST00000558093 GPR37L1O60883 481 aa7.18□□□□□ -1.26
SPG11-206ENST00000558093 CCDC116Q8IYX3 515 aa7.18□□□□□ -1.26
SPG11-206ENST00000558093 COG6Q9Y2V7 657 aa7.18□□□□□ -1.26
SPG11-206ENST00000558093 CAPN5O15484 640 aaPredicted RBP7.17□□□□□ -1.26
SPG11-206ENST00000558093 NR3C2P08235 984 aa7.17□□□□□ -1.26
SPG11-206ENST00000558093 GRM5P41594 1212 aa7.17□□□□□ -1.26
SPG11-206ENST00000558093 CRIPAKQ8N1N5 446 aa7.17□□□□□ -1.26
SPG11-206ENST00000558093 AAASQ9NRG9 546 aa7.17□□□□□ -1.26
SPG11-206ENST00000558093 ZIC2O95409 532 aaPredicted RBP7.16□□□□□ -1.26
SPG11-206ENST00000558093 SMCPP49901 116 aaPredicted RBP7.16□□□□□ -1.26
SPG11-206ENST00000558093 EIF4G2P78344 907 aaKnown RBP eCLIP7.16□□□□□ -1.26
SPG11-206ENST00000558093 DHX9Q08211 1270 aaKnown RBP7.16□□□□□ -1.26
SPG11-206ENST00000558093 VAC14Q08AM6 782 aa7.16□□□□□ -1.26
SPG11-206ENST00000558093 WASHC4Q2M389 1173 aa7.16□□□□□ -1.26
SPG11-206ENST00000558093 INTS6LQ5JSJ4 861 aaKnown RBP7.16□□□□□ -1.26
SPG11-206ENST00000558093 POM121Q96HA1 1249 aa7.16□□□□□ -1.26
SPG11-206ENST00000558093 PGPEP1Q9NXJ5 209 aa7.16□□□□□ -1.26
SPG11-206ENST00000558093 EMILIN1Q9Y6C2 1016 aa7.16□□□□□ -1.26
SPG11-206ENST00000558093 LCE2BO14633 110 aa7.15□□□□□ -1.26
SPG11-206ENST00000558093 MCCD1P59942 119 aaPredicted RBP7.15□□□□□ -1.26
SPG11-206ENST00000558093 IRF5Q13568 498 aa7.15□□□□□ -1.26
SPG11-206ENST00000558093 TIMP2P16035 220 aa7.14□□□□□ -1.27
SPG11-206ENST00000558093 PPP1R26Q5T8A7 1209 aaPredicted RBP7.14□□□□□ -1.27
SPG11-206ENST00000558093 ITPKCQ96DU7 683 aa7.14□□□□□ -1.27
SPG11-206ENST00000558093 ZFAND3Q9H8U3 227 aa7.14□□□□□ -1.27
SPG11-206ENST00000558093 BMP1P13497 986 aa7.13□□□□□ -1.27
SPG11-206ENST00000558093 SEPT12Q8IYM1 358 aa7.13□□□□□ -1.27
SPG11-206ENST00000558093 RNF20Q5VTR2 975 aa7.12□□□□□ -1.27
SPG11-206ENST00000558093 TRIM52Q96A61 297 aa7.12□□□□□ -1.27
SPG11-206ENST00000558093 ATP13A2Q9NQ11 1180 aa7.12□□□□□ -1.27
SPG11-206ENST00000558093 GIGYF1O75420 1035 aaPredicted RBP7.11□□□□□ -1.27
SPG11-206ENST00000558093 UPP2O95045 317 aa7.11□□□□□ -1.27
SPG11-206ENST00000558093 SEMA3FQ13275 785 aa7.11□□□□□ -1.27
SPG11-206ENST00000558093 CLUAP1Q96AJ1 413 aa7.11□□□□□ -1.27
SPG11-206ENST00000558093 DACH1Q9UI36 760 aa7.11□□□□□ -1.27
SPG11-206ENST00000558093 ESPNB1AK53 854 aa7.1□□□□□ -1.27
SPG11-206ENST00000558093 ERVH48-1M5A8F1 160 aa7.1□□□□□ -1.27
SPG11-206ENST00000558093 SOX11P35716 441 aa7.1□□□□□ -1.27
SPG11-206ENST00000558093 SCARF1Q14162 830 aa7.1□□□□□ -1.27
SPG11-206ENST00000558093 SLFNL1Q499Z3 407 aa7.1□□□□□ -1.27
SPG11-206ENST00000558093 KLF16Q9BXK1 252 aaPredicted RBP7.1□□□□□ -1.27
SPG11-206ENST00000558093 TMPRSS4Q9NRS4 437 aa7.1□□□□□ -1.27
SPG11-206ENST00000558093 ZNF787Q6DD87 383 aa7.09□□□□□ -1.27
SPG11-206ENST00000558093 MRPL14Q6P1L8 145 aaKnown RBP7.09□□□□□ -1.27
SPG11-206ENST00000558093 PROSER2Q86WR7 435 aaPredicted RBP7.09□□□□□ -1.27
SPG11-206ENST00000558093 CCDC125Q86Z20 511 aa7.09□□□□□ -1.27
SPG11-206ENST00000558093 ZNF784Q8NCA9 323 aaPredicted RBP7.09□□□□□ -1.27
SPG11-206ENST00000558093 ESF1Q9H501 851 aaKnown RBP7.09□□□□□ -1.27
SPG11-206ENST00000558093 SENP2Q9HC62 589 aa7.09□□□□□ -1.27
SPG11-206ENST00000558093 CYLDQ9NQC7 956 aa7.09□□□□□ -1.27
SPG11-206ENST00000558093 GMPR2Q9P2T1 348 aaKnown RBP7.09□□□□□ -1.27
SPG11-206ENST00000558093 C11orf95C9JLR9 678 aaPredicted RBP7.08□□□□□ -1.28
SPG11-206ENST00000558093 CBLBQ13191 982 aa7.08□□□□□ -1.28
SPG11-206ENST00000558093 C6orf118Q5T5N4 469 aa7.08□□□□□ -1.28
SPG11-206ENST00000558093 LINC00528Q8N1L1 170 aa7.08□□□□□ -1.28
SPG11-206ENST00000558093 MEIOBQ8N635 442 aa7.08□□□□□ -1.28
SPG11-206ENST00000558093 PCDHB11Q9Y5F2 797 aa7.08□□□□□ -1.28
SPG11-206ENST00000558093 GTF3C3Q9Y5Q9 886 aa7.08□□□□□ -1.28
SPG11-206ENST00000558093 BMP2P12643 396 aa7.07□□□□□ -1.28
SPG11-206ENST00000558093 TRIM46Q7Z4K8 759 aa7.07□□□□□ -1.28
SPG11-206ENST00000558093 RNF135Q8IUD6 432 aa7.07□□□□□ -1.28
SPG11-206ENST00000558093 KIFC2Q96AC6 838 aa7.07□□□□□ -1.28
SPG11-206ENST00000558093 PURBQ96QR8 312 aaKnown RBP7.07□□□□□ -1.28
SPG11-206ENST00000558093 CEP126Q9P2H0 1117 aa7.07□□□□□ -1.28
SPG11-206ENST00000558093 TSEN34Q9BSV6 310 aaKnown RBP7.06□□□□□ -1.28
SPG11-206ENST00000558093 DOLKQ9UPQ8 538 aa7.06□□□□□ -1.28
SPG11-206ENST00000558093 POM121CA8CG34 1229 aa7.05□□□□□ -1.28
SPG11-206ENST00000558093 RELBQ01201 579 aa7.05□□□□□ -1.28
SPG11-206ENST00000558093 TRIM47Q96LD4 638 aa7.05□□□□□ -1.28
SPG11-206ENST00000558093 ZFP42Q96MM3 310 aa7.05□□□□□ -1.28
SPG11-206ENST00000558093 A6NJR5 290 aa7.04□□□□□ -1.28
SPG11-206ENST00000558093 MYCP01106 439 aaPredicted RBP7.04□□□□□ -1.28
SPG11-206ENST00000558093 ADH1AP07327 375 aa7.04□□□□□ -1.28
SPG11-206ENST00000558093 CC2D2BQ6DHV5 1058 aa7.04□□□□□ -1.28
SPG11-206ENST00000558093 AGBL1Q96MI9 1066 aa7.04□□□□□ -1.28
SPG11-206ENST00000558093 POTECB2RU33 542 aa7.03□□□□□ -1.28
SPG11-206ENST00000558093 LILRA1O75019 489 aa7.03□□□□□ -1.28
SPG11-206ENST00000558093 OXLD1Q5BKU9 147 aa7.03□□□□□ -1.28
SPG11-206ENST00000558093 Q6ZVU0 165 aa7.03□□□□□ -1.28
SPG11-206ENST00000558093 ERVK-9P63128 1117 aa7.02□□□□□ -1.29
SPG11-206ENST00000558093 CYP2U1Q7Z449 544 aa7.02□□□□□ -1.29
SPG11-206ENST00000558093 CCDC85AQ96PX6 553 aaPredicted RBP7.02□□□□□ -1.29
SPG11-206ENST00000558093 ATP5J2-PTCD1G3V325 749 aa7.01□□□□□ -1.29
SPG11-206ENST00000558093 MAN1A2O60476 641 aa7.01□□□□□ -1.29
SPG11-206ENST00000558093 SNRPBP14678 240 aaKnown RBP7.01□□□□□ -1.29
SPG11-206ENST00000558093 SCTRP47872 440 aa7.01□□□□□ -1.29
SPG11-206ENST00000558093 HDGFL1Q5TGJ6 251 aa7.01□□□□□ -1.29
SPG11-206ENST00000558093 PLPP7Q8NBV4 271 aa7.01□□□□□ -1.29
SPG11-206ENST00000558093 ALG2Q9H553 416 aa7.01□□□□□ -1.29
SPG11-206ENST00000558093 ZNF395Q9H8N7 513 aaPredicted RBP7.01□□□□□ -1.29
SPG11-206ENST00000558093 POLMQ9NP87 494 aaPredicted RBP7.01□□□□□ -1.29
SPG11-206ENST00000558093 SKIP12755 728 aa7□□□□□ -1.29
SPG11-206ENST00000558093 ADD1P35611 737 aaKnown RBP7□□□□□ -1.29
SPG11-206ENST00000558093 FNBP4Q8N3X1 1017 aaPredicted RBP7□□□□□ -1.29
SPG11-206ENST00000558093 GLMNQ92990 594 aa7□□□□□ -1.29
SPG11-206ENST00000558093 SIRT1Q96EB6 747 aa7□□□□□ -1.29
SPG11-206ENST00000558093 CALR3Q96L12 384 aaKnown RBP7□□□□□ -1.29
SPG11-206ENST00000558093 CDCA7Q9BWT1 371 aaPredicted RBP7□□□□□ -1.29
SPG11-206ENST00000558093 PIK3CDO00329 1044 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms