RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 SLIT3O75094 1523 aa22.05■■□□□ 1.12
TUBB3-214ENST00000557490 USP31Q70CQ4 1352 aa22.04■■□□□ 1.12
TUBB3-214ENST00000557490 POLR3GLQ9BT43 218 aa22.04■■□□□ 1.12
TUBB3-214ENST00000557490 RREB1Q92766 1687 aa22.04■■□□□ 1.12
TUBB3-214ENST00000557490 SOX12O15370 315 aa22.03■■□□□ 1.12
TUBB3-214ENST00000557490 EVA1CP58658 441 aa22.03■■□□□ 1.12
TUBB3-214ENST00000557490 CAMTA1Q9Y6Y1 1673 aa22.02■■□□□ 1.12
TUBB3-214ENST00000557490 STRN4Q9NRL3 753 aa22.02■■□□□ 1.12
TUBB3-214ENST00000557490 NUP188Q5SRE5 1749 aa22.02■■□□□ 1.12
TUBB3-214ENST00000557490 PARD3Q8TEW0 1356 aa22.01■■□□□ 1.11
TUBB3-214ENST00000557490 DCAF8L1A6NGE4 600 aa22.01■■□□□ 1.11
TUBB3-214ENST00000557490 AATKQ6ZMQ8 1374 aa21.99■■□□□ 1.11
TUBB3-214ENST00000557490 TRIM37O94972 964 aa21.99■■□□□ 1.11
TUBB3-214ENST00000557490 PPP1R1BQ9UD71 204 aaPredicted RBP21.99■■□□□ 1.11
TUBB3-214ENST00000557490 SPATA31A5Q5VU36 1347 aa21.99■■□□□ 1.11
TUBB3-214ENST00000557490 SPATA31A7Q8IWB4 1347 aa21.99■■□□□ 1.11
TUBB3-214ENST00000557490 ARHGEF25Q86VW2 580 aa21.98■■□□□ 1.11
TUBB3-214ENST00000557490 UTRNP46939 3433 aa21.97■■□□□ 1.11
TUBB3-214ENST00000557490 SENP3-EIF4A1A0A087X0R7 540 aa21.97■■□□□ 1.11
TUBB3-214ENST00000557490 COG3Q96JB2 828 aa21.97■■□□□ 1.11
TUBB3-214ENST00000557490 ZNF784Q8NCA9 323 aaPredicted RBP21.96■■□□□ 1.11
TUBB3-214ENST00000557490 APBA3O96018 575 aa21.95■■□□□ 1.1
TUBB3-214ENST00000557490 SPON1Q9HCB6 807 aa21.95■■□□□ 1.1
TUBB3-214ENST00000557490 LARP1Q6PKG0 1096 aaKnown RBP21.94■■□□□ 1.1
TUBB3-214ENST00000557490 SPATA31A1Q5TZJ5 1347 aa21.94■■□□□ 1.1
TUBB3-214ENST00000557490 OVOS2A0A0J9YW53 1432 aa21.94■■□□□ 1.1
TUBB3-214ENST00000557490 OVOS2Q6IE36 1432 aa21.94■■□□□ 1.1
TUBB3-214ENST00000557490 NFAT5O94916 1531 aa21.94■■□□□ 1.1
TUBB3-214ENST00000557490 LMO7Q8WWI1 1683 aa21.94■■□□□ 1.1
TUBB3-214ENST00000557490 FAM196AQ6ZSG2 479 aa21.93■■□□□ 1.1
TUBB3-214ENST00000557490 USP54Q70EL1 1684 aa21.93■■□□□ 1.1
TUBB3-214ENST00000557490 COL5A2P05997 1499 aaPredicted RBP21.92■■□□□ 1.1
TUBB3-214ENST00000557490 FYB1O15117 783 aa21.92■■□□□ 1.1
TUBB3-214ENST00000557490 CARD14Q9BXL6 1004 aa21.92■■□□□ 1.1
TUBB3-214ENST00000557490 NSD3Q9BZ95 1437 aa21.91■■□□□ 1.1
TUBB3-214ENST00000557490 KCNQ2O43526 872 aa21.91■■□□□ 1.1
TUBB3-214ENST00000557490 NBPF14Q5TI25 921 aa21.91■■□□□ 1.1
TUBB3-214ENST00000557490 GGNBP2Q9H3C7 697 aa21.91■■□□□ 1.1
TUBB3-214ENST00000557490 USP35Q9P2H5 1018 aa21.91■■□□□ 1.1
TUBB3-214ENST00000557490 AXIN2Q9Y2T1 843 aa21.91■■□□□ 1.1
TUBB3-214ENST00000557490 MYOM1P52179 1685 aa21.91■■□□□ 1.1
TUBB3-214ENST00000557490 C11orf95C9JLR9 678 aaPredicted RBP21.9■■□□□ 1.1
TUBB3-214ENST00000557490 CSB-PGBD3P0DP91 1061 aa21.89■■□□□ 1.09
TUBB3-214ENST00000557490 TCP11L2Q8N4U5 519 aa21.89■■□□□ 1.09
TUBB3-214ENST00000557490 TOM1L2Q6ZVM7 507 aa21.88■■□□□ 1.09
TUBB3-214ENST00000557490 BARGINQ6ZT62 677 aa21.87■■□□□ 1.09
TUBB3-214ENST00000557490 THRAP3Q9Y2W1 955 aaKnown RBP21.87■■□□□ 1.09
TUBB3-214ENST00000557490 CRB1P82279 1406 aa21.87■■□□□ 1.09
TUBB3-214ENST00000557490 COL18A1P39060 1754 aa21.87■■□□□ 1.09
TUBB3-214ENST00000557490 ABCC6O95255 1503 aa21.86■■□□□ 1.09
TUBB3-214ENST00000557490 CGNL1Q0VF96 1302 aa21.86■■□□□ 1.09
TUBB3-214ENST00000557490 WDR17Q8IZU2 1322 aa21.86■■□□□ 1.09
TUBB3-214ENST00000557490 C1QTNF8P60827 252 aa21.86■■□□□ 1.09
TUBB3-214ENST00000557490 PANK3Q9H999 370 aa21.86■■□□□ 1.09
TUBB3-214ENST00000557490 KIF7Q2M1P5 1343 aa21.84■■□□□ 1.09
TUBB3-214ENST00000557490 CEP350Q5VT06 3117 aa21.84■■□□□ 1.09
TUBB3-214ENST00000557490 AMPHP49418 695 aa21.83■■□□□ 1.09
TUBB3-214ENST00000557490 IP6K1Q92551 441 aa21.83■■□□□ 1.09
TUBB3-214ENST00000557490 MAP3K19Q56UN5 1328 aa21.82■■□□□ 1.08
TUBB3-214ENST00000557490 CHD4Q14839 1912 aa21.82■■□□□ 1.08
TUBB3-214ENST00000557490 FBLN1P23142 703 aa21.81■■□□□ 1.08
TUBB3-214ENST00000557490 CARD10Q9BWT7 1032 aa21.81■■□□□ 1.08
TUBB3-214ENST00000557490 CASZ1Q86V15 1759 aa21.81■■□□□ 1.08
TUBB3-214ENST00000557490 ANKRD24Q8TF21 1146 aa21.8■■□□□ 1.08
TUBB3-214ENST00000557490 KIF20BQ96Q89 1820 aa21.8■■□□□ 1.08
TUBB3-214ENST00000557490 ERBB3P21860 1342 aa21.8■■□□□ 1.08
TUBB3-214ENST00000557490 RRS1Q15050 365 aaKnown RBP21.79■■□□□ 1.08
TUBB3-214ENST00000557490 LTN1O94822 1766 aa21.79■■□□□ 1.08
TUBB3-214ENST00000557490 HOXC9P31274 260 aa21.78■■□□□ 1.08
TUBB3-214ENST00000557490 PDE3BQ13370 1112 aa21.78■■□□□ 1.08
TUBB3-214ENST00000557490 NLRP2Q9NX02 1062 aa21.78■■□□□ 1.08
TUBB3-214ENST00000557490 CCDC7Q96M83 1385 aa21.77■■□□□ 1.08
TUBB3-214ENST00000557490 LTV1Q96GA3 475 aaPredicted RBP21.77■■□□□ 1.08
TUBB3-214ENST00000557490 CDCA7Q9BWT1 371 aaPredicted RBP21.77■■□□□ 1.08
TUBB3-214ENST00000557490 KNSTRNQ9Y448 316 aa21.77■■□□□ 1.08
TUBB3-214ENST00000557490 RTL1A6NKG5 1358 aa21.76■■□□□ 1.07
TUBB3-214ENST00000557490 RGPD5Q99666 1765 aa21.76■■□□□ 1.07
TUBB3-214ENST00000557490 RGPD3A6NKT7 1758 aaPredicted RBP21.74■■□□□ 1.07
TUBB3-214ENST00000557490 RGPD4Q7Z3J3 1758 aa21.74■■□□□ 1.07
TUBB3-214ENST00000557490 NSD2O96028 1365 aa21.74■■□□□ 1.07
TUBB3-214ENST00000557490 DDB1Q16531 1140 aa21.73■■□□□ 1.07
TUBB3-214ENST00000557490 WASHC2AQ641Q2 1341 aa21.73■■□□□ 1.07
TUBB3-214ENST00000557490 ANO8Q9HCE9 1232 aaPredicted RBP21.72■■□□□ 1.07
TUBB3-214ENST00000557490 KIF24Q5T7B8 1368 aa21.72■■□□□ 1.07
TUBB3-214ENST00000557490 PDGFDQ9GZP0 370 aaPredicted RBP21.71■■□□□ 1.07
TUBB3-214ENST00000557490 FLT4P35916 1363 aa21.71■■□□□ 1.07
TUBB3-214ENST00000557490 PPM1GO15355 546 aaPredicted RBP21.7■■□□□ 1.06
TUBB3-214ENST00000557490 TNNT2P45379 298 aaPredicted RBP21.7■■□□□ 1.06
TUBB3-214ENST00000557490 EMILIN1Q9Y6C2 1016 aa21.7■■□□□ 1.06
TUBB3-214ENST00000557490 PTGER2P43116 358 aa21.69■■□□□ 1.06
TUBB3-214ENST00000557490 MORC1Q86VD1 984 aa21.69■■□□□ 1.06
TUBB3-214ENST00000557490 SMG6Q86US8 1419 aaKnown RBP21.69■■□□□ 1.06
TUBB3-214ENST00000557490 ZBTB7AO95365 584 aa21.68■■□□□ 1.06
TUBB3-214ENST00000557490 IL2RBP14784 551 aa21.68■■□□□ 1.06
TUBB3-214ENST00000557490 HSP90AB2PQ58FF8 381 aa21.68■■□□□ 1.06
TUBB3-214ENST00000557490 INSRP06213 1382 aa21.68■■□□□ 1.06
TUBB3-214ENST00000557490 PARP4Q9UKK3 1724 aaKnown RBP21.68■■□□□ 1.06
TUBB3-214ENST00000557490 EXOC5O00471 708 aa21.67■■□□□ 1.06
TUBB3-214ENST00000557490 SYT17Q9BSW7 474 aa21.66■■□□□ 1.06
TUBB3-214ENST00000557490 POLKQ9UBT6 870 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms