RNA–Protein interactions for RNA: ENST00000557471.5

PAPOLA-225, Transcript of poly(A) polymerase alpha, human

TSL 1 (best) BASIC

Gene PAPOLA, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-225	ENST00000557471	IP6K1	Q92551	441 aa		32.84	■■■□□ 2.85
PAPOLA-225	ENST00000557471	CCDC9	Q9Y3X0	531 aa	Known RBP	32.84	■■■□□ 2.85
PAPOLA-225	ENST00000557471	AXIN2	Q9Y2T1	843 aa		32.82	■■■□□ 2.84
PAPOLA-225	ENST00000557471	ABCC6	O95255	1503 aa		32.82	■■■□□ 2.84
PAPOLA-225	ENST00000557471	KIF24	Q5T7B8	1368 aa		32.81	■■■□□ 2.84
PAPOLA-225	ENST00000557471	VPS72	Q15906	364 aa		32.81	■■■□□ 2.84
PAPOLA-225	ENST00000557471	PPM1G	O15355	546 aa	Predicted RBP	32.8	■■■□□ 2.84
PAPOLA-225	ENST00000557471	CAMTA1	Q9Y6Y1	1673 aa		32.8	■■■□□ 2.84
PAPOLA-225	ENST00000557471	RTL1	A6NKG5	1358 aa		32.8	■■■□□ 2.84
PAPOLA-225	ENST00000557471	LMO7	Q8WWI1	1683 aa		32.79	■■■□□ 2.84
PAPOLA-225	ENST00000557471	LTN1	O94822	1766 aa		32.78	■■■□□ 2.84
PAPOLA-225	ENST00000557471	CSB-PGBD3	P0DP91	1061 aa		32.78	■■■□□ 2.84
PAPOLA-225	ENST00000557471	HOXC9	P31274	260 aa		32.78	■■■□□ 2.84
PAPOLA-225	ENST00000557471	POTEA	Q6S8J7	498 aa		32.78	■■■□□ 2.84
PAPOLA-225	ENST00000557471	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.78	■■■□□ 2.84
PAPOLA-225	ENST00000557471	ATRN	O75882	1429 aa		32.77	■■■□□ 2.84
PAPOLA-225	ENST00000557471	BLM	P54132	1417 aa	Predicted RBP	32.77	■■■□□ 2.84
PAPOLA-225	ENST00000557471	RXRB	P28702	533 aa		32.77	■■■□□ 2.84
PAPOLA-225	ENST00000557471	POLK	Q9UBT6	870 aa		32.77	■■■□□ 2.84
PAPOLA-225	ENST00000557471	RBM6	P78332	1123 aa	Known RBP	32.77	■■■□□ 2.84
PAPOLA-225	ENST00000557471	GJD4	Q96KN9	370 aa	Predicted RBP	32.77	■■■□□ 2.84
PAPOLA-225	ENST00000557471	EMILIN1	Q9Y6C2	1016 aa		32.77	■■■□□ 2.84
PAPOLA-225	ENST00000557471	FLT4	P35916	1363 aa		32.76	■■■□□ 2.83
PAPOLA-225	ENST00000557471	COL5A2	P05997	1499 aa	Predicted RBP	32.75	■■■□□ 2.83
PAPOLA-225	ENST00000557471	COL18A1	P39060	1754 aa		32.75	■■■□□ 2.83
PAPOLA-225	ENST00000557471	WDR17	Q8IZU2	1322 aa		32.73	■■■□□ 2.83
PAPOLA-225	ENST00000557471	LARP1	Q6PKG0	1096 aa	Known RBP	32.73	■■■□□ 2.83
PAPOLA-225	ENST00000557471	TOM1L2	Q6ZVM7	507 aa		32.73	■■■□□ 2.83
PAPOLA-225	ENST00000557471	ANKRD24	Q8TF21	1146 aa		32.73	■■■□□ 2.83
PAPOLA-225	ENST00000557471	NRAP	Q86VF7	1730 aa		32.72	■■■□□ 2.83
PAPOLA-225	ENST00000557471	ERBB3	P21860	1342 aa		32.71	■■■□□ 2.83
PAPOLA-225	ENST00000557471	LTV1	Q96GA3	475 aa	Predicted RBP	32.7	■■■□□ 2.83
PAPOLA-225	ENST00000557471	SPATA31A5	Q5VU36	1347 aa		32.7	■■■□□ 2.83
PAPOLA-225	ENST00000557471	SPATA31A7	Q8IWB4	1347 aa		32.7	■■■□□ 2.83
PAPOLA-225	ENST00000557471	MAP2	P11137	1827 aa	Known RBP	32.7	■■■□□ 2.83
PAPOLA-225	ENST00000557471	INSR	P06213	1382 aa		32.7	■■■□□ 2.82
PAPOLA-225	ENST00000557471	SMG6	Q86US8	1419 aa	Known RBP	32.69	■■■□□ 2.82
PAPOLA-225	ENST00000557471	HSP90AB2P	Q58FF8	381 aa		32.68	■■■□□ 2.82
PAPOLA-225	ENST00000557471	CRB1	P82279	1406 aa		32.68	■■■□□ 2.82
PAPOLA-225	ENST00000557471	USP35	Q9P2H5	1018 aa		32.68	■■■□□ 2.82
PAPOLA-225	ENST00000557471	NLRP2	Q9NX02	1062 aa		32.67	■■■□□ 2.82
PAPOLA-225	ENST00000557471	SPATA31A1	Q5TZJ5	1347 aa		32.67	■■■□□ 2.82
PAPOLA-225	ENST00000557471	MTHFS	P49914	203 aa		32.66	■■■□□ 2.82
PAPOLA-225	ENST00000557471	RALBP1	Q15311	655 aa		32.66	■■■□□ 2.82
PAPOLA-225	ENST00000557471	THRAP3	Q9Y2W1	955 aa	Known RBP	32.66	■■■□□ 2.82
PAPOLA-225	ENST00000557471	RGPD5	Q99666	1765 aa		32.65	■■■□□ 2.82
PAPOLA-225	ENST00000557471	CARD10	Q9BWT7	1032 aa		32.65	■■■□□ 2.82
PAPOLA-225	ENST00000557471	TCP11L2	Q8N4U5	519 aa		32.64	■■■□□ 2.82
PAPOLA-225	ENST00000557471	PARD3	Q8TEW0	1356 aa		32.61	■■■□□ 2.81
PAPOLA-225	ENST00000557471	PEAK1	Q9H792	1746 aa		32.6	■■■□□ 2.81
PAPOLA-225	ENST00000557471		A0A0G2JS52	829 aa		32.6	■■■□□ 2.81
PAPOLA-225	ENST00000557471	PPP2R1A	P30153	589 aa		32.6	■■■□□ 2.81
PAPOLA-225	ENST00000557471	MYT1	Q01538	1121 aa		32.6	■■■□□ 2.81
PAPOLA-225	ENST00000557471	FAM98C	Q17RN3	349 aa	Known RBP	32.6	■■■□□ 2.81
PAPOLA-225	ENST00000557471	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.58	■■■□□ 2.81
PAPOLA-225	ENST00000557471	BARGIN	Q6ZT62	677 aa		32.58	■■■□□ 2.81
PAPOLA-225	ENST00000557471	CFAP53	Q96M91	514 aa		32.58	■■■□□ 2.81
PAPOLA-225	ENST00000557471	ONECUT3	O60422	494 aa	Predicted RBP	32.57	■■■□□ 2.8
PAPOLA-225	ENST00000557471	GLI3	P10071	1580 aa		32.57	■■■□□ 2.8
PAPOLA-225	ENST00000557471	EIF4A2	Q14240	407 aa	Known RBP	32.54	■■■□□ 2.8
PAPOLA-225	ENST00000557471	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.54	■■■□□ 2.8
PAPOLA-225	ENST00000557471	FAM208A	Q9UK61	1670 aa	Known RBP	32.53	■■■□□ 2.8
PAPOLA-225	ENST00000557471	SEPT12	Q8IYM1	358 aa		32.52	■■■□□ 2.8
PAPOLA-225	ENST00000557471	NBPF6	Q5VWK0	638 aa		32.51	■■■□□ 2.8
PAPOLA-225	ENST00000557471	NBPF4	Q96M43	638 aa		32.51	■■■□□ 2.8
PAPOLA-225	ENST00000557471	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.51	■■■□□ 2.8
PAPOLA-225	ENST00000557471	ANP32C	O43423	234 aa		32.51	■■■□□ 2.79
PAPOLA-225	ENST00000557471	DIAPH1	O60610	1272 aa	Known RBP	32.5	■■■□□ 2.79
PAPOLA-225	ENST00000557471	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.49	■■■□□ 2.79
PAPOLA-225	ENST00000557471	IL2RB	P14784	551 aa		32.47	■■■□□ 2.79
PAPOLA-225	ENST00000557471	EYA1	Q99502	592 aa		32.47	■■■□□ 2.79
PAPOLA-225	ENST00000557471	RGS12	O14924	1447 aa		32.46	■■■□□ 2.79
PAPOLA-225	ENST00000557471	IL13	P35225	146 aa		32.45	■■■□□ 2.79
PAPOLA-225	ENST00000557471	RAPGEF4	Q8WZA2	1011 aa		32.45	■■■□□ 2.79
PAPOLA-225	ENST00000557471	USHBP1	Q8N6Y0	703 aa		32.44	■■■□□ 2.78
PAPOLA-225	ENST00000557471	NUDC	Q9Y266	331 aa		32.44	■■■□□ 2.78
PAPOLA-225	ENST00000557471	DDB1	Q16531	1140 aa		32.43	■■■□□ 2.78
PAPOLA-225	ENST00000557471	EXOC5	O00471	708 aa		32.42	■■■□□ 2.78
PAPOLA-225	ENST00000557471	PDE3B	Q13370	1112 aa		32.42	■■■□□ 2.78
PAPOLA-225	ENST00000557471	ILDR2	Q71H61	639 aa		32.42	■■■□□ 2.78
PAPOLA-225	ENST00000557471	TAT	P17735	454 aa	Predicted RBP	32.4	■■■□□ 2.78
PAPOLA-225	ENST00000557471	IGSF1	Q8N6C5	1336 aa		32.4	■■■□□ 2.78
PAPOLA-225	ENST00000557471	KRT27	Q7Z3Y8	459 aa		32.39	■■■□□ 2.78
PAPOLA-225	ENST00000557471	DISP2	A7MBM2	1401 aa		32.37	■■■□□ 2.77
PAPOLA-225	ENST00000557471	RGPD2	P0DJD1	1756 aa		32.37	■■■□□ 2.77
PAPOLA-225	ENST00000557471	U2SURP	O15042	1029 aa	Known RBP	32.37	■■■□□ 2.77
PAPOLA-225	ENST00000557471	THSD7A	Q9UPZ6	1657 aa		32.36	■■■□□ 2.77
PAPOLA-225	ENST00000557471	SULT6B1	Q6IMI4	303 aa		32.34	■■■□□ 2.77
PAPOLA-225	ENST00000557471	NCAPD2	Q15021	1401 aa		32.34	■■■□□ 2.77
PAPOLA-225	ENST00000557471	COL3A1	P02461	1466 aa	Predicted RBP	32.34	■■■□□ 2.77
PAPOLA-225	ENST00000557471	PARP4	Q9UKK3	1724 aa	Known RBP	32.31	■■■□□ 2.76
PAPOLA-225	ENST00000557471	ZCRB1	Q8TBF4	217 aa	Known RBP	32.31	■■■□□ 2.76
PAPOLA-225	ENST00000557471	WNK3	Q9BYP7	1800 aa		32.29	■■■□□ 2.76
PAPOLA-225	ENST00000557471	U2AF1L5	P0DN76	240 aa	Predicted RBP	32.28	■■■□□ 2.76
PAPOLA-225	ENST00000557471	U2AF1	Q01081	240 aa	Known RBP eCLIP	32.28	■■■□□ 2.76
PAPOLA-225	ENST00000557471	SPG7	Q9UQ90	795 aa		32.28	■■■□□ 2.76
PAPOLA-225	ENST00000557471	OVOS2	A0A0G2JMS6	1433 aa		32.28	■■■□□ 2.76
PAPOLA-225	ENST00000557471	HMOX1	P09601	288 aa		32.27	■■■□□ 2.76
PAPOLA-225	ENST00000557471	MEGF6	O75095	1541 aa		32.27	■■■□□ 2.76
PAPOLA-225	ENST00000557471	TNS2	Q63HR2	1409 aa		32.27	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms