RNA–Protein interactions for RNA: ENST00000557435.1

SRSF5-218, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 622 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-218ENST00000557435 COL18A1P39060 1754 aa12.93□□□□□ -0.34
SRSF5-218ENST00000557435 NSD3Q9BZ95 1437 aa12.93□□□□□ -0.34
SRSF5-218ENST00000557435 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
SRSF5-218ENST00000557435 CAMTA1Q9Y6Y1 1673 aa12.93□□□□□ -0.34
SRSF5-218ENST00000557435 CGNL1Q0VF96 1302 aa12.92□□□□□ -0.34
SRSF5-218ENST00000557435 CDK12Q9NYV4 1490 aaPredicted RBP12.91□□□□□ -0.34
SRSF5-218ENST00000557435 NRAPQ86VF7 1730 aa12.91□□□□□ -0.34
SRSF5-218ENST00000557435 AXIN2Q9Y2T1 843 aa12.91□□□□□ -0.34
SRSF5-218ENST00000557435 ABCC6O95255 1503 aa12.9□□□□□ -0.34
SRSF5-218ENST00000557435 KIF20BQ96Q89 1820 aa12.9□□□□□ -0.34
SRSF5-218ENST00000557435 RNF39Q9H2S5 420 aa12.89□□□□□ -0.35
SRSF5-218ENST00000557435 SPATA31A5Q5VU36 1347 aa12.88□□□□□ -0.35
SRSF5-218ENST00000557435 SPATA31A7Q8IWB4 1347 aa12.88□□□□□ -0.35
SRSF5-218ENST00000557435 SOX12O15370 315 aa12.88□□□□□ -0.35
SRSF5-218ENST00000557435 EVA1CP58658 441 aa12.88□□□□□ -0.35
SRSF5-218ENST00000557435 AMER1Q5JTC6 1135 aaPredicted RBP12.88□□□□□ -0.35
SRSF5-218ENST00000557435 IP6K1Q92551 441 aa12.88□□□□□ -0.35
SRSF5-218ENST00000557435 KNSTRNQ9Y448 316 aa12.88□□□□□ -0.35
SRSF5-218ENST00000557435 NSD2O96028 1365 aa12.88□□□□□ -0.35
SRSF5-218ENST00000557435 SPATA31A1Q5TZJ5 1347 aa12.88□□□□□ -0.35
SRSF5-218ENST00000557435 GLI3P10071 1580 aa12.87□□□□□ -0.35
SRSF5-218ENST00000557435 COL5A2P05997 1499 aaPredicted RBP12.87□□□□□ -0.35
SRSF5-218ENST00000557435 FBLN1P23142 703 aa12.87□□□□□ -0.35
SRSF5-218ENST00000557435 MAP3K19Q56UN5 1328 aa12.87□□□□□ -0.35
SRSF5-218ENST00000557435 LTN1O94822 1766 aa12.86□□□□□ -0.35
SRSF5-218ENST00000557435 RGPD5Q99666 1765 aa12.86□□□□□ -0.35
SRSF5-218ENST00000557435 KIF24Q5T7B8 1368 aa12.86□□□□□ -0.35
SRSF5-218ENST00000557435 LARP1Q6PKG0 1096 aaKnown RBP12.86□□□□□ -0.35
SRSF5-218ENST00000557435 STRN4Q9NRL3 753 aa12.86□□□□□ -0.35
SRSF5-218ENST00000557435 THRAP3Q9Y2W1 955 aaKnown RBP12.86□□□□□ -0.35
SRSF5-218ENST00000557435 WDR17Q8IZU2 1322 aa12.86□□□□□ -0.35
SRSF5-218ENST00000557435 NPC1L1Q9UHC9 1359 aa12.85□□□□□ -0.35
SRSF5-218ENST00000557435 BARGINQ6ZT62 677 aa12.85□□□□□ -0.35
SRSF5-218ENST00000557435 BLMP54132 1417 aaPredicted RBP12.85□□□□□ -0.35
SRSF5-218ENST00000557435 MAP2P11137 1827 aaKnown RBP12.85□□□□□ -0.35
SRSF5-218ENST00000557435 ANKRD26Q9UPS8 1709 aa12.85□□□□□ -0.35
SRSF5-218ENST00000557435 ZBTB7CA1YPR0 619 aa12.84□□□□□ -0.35
SRSF5-218ENST00000557435 HOXC9P31274 260 aa12.84□□□□□ -0.35
SRSF5-218ENST00000557435 CCDC9Q9Y3X0 531 aaKnown RBP12.84□□□□□ -0.35
SRSF5-218ENST00000557435 CRB1P82279 1406 aa12.84□□□□□ -0.35
SRSF5-218ENST00000557435 RGS12O14924 1447 aa12.83□□□□□ -0.36
SRSF5-218ENST00000557435 SLC4A2P04920 1241 aa12.83□□□□□ -0.36
SRSF5-218ENST00000557435 RRS1Q15050 365 aaKnown RBP12.83□□□□□ -0.36
SRSF5-218ENST00000557435 TCP11L2Q8N4U5 519 aa12.83□□□□□ -0.36
SRSF5-218ENST00000557435 CARD10Q9BWT7 1032 aa12.83□□□□□ -0.36
SRSF5-218ENST00000557435 POLKQ9UBT6 870 aa12.83□□□□□ -0.36
SRSF5-218ENST00000557435 ERBB3P21860 1342 aa12.83□□□□□ -0.36
SRSF5-218ENST00000557435 RTL1A6NKG5 1358 aa12.82□□□□□ -0.36
SRSF5-218ENST00000557435 SOCS7O14512 581 aa12.82□□□□□ -0.36
SRSF5-218ENST00000557435 AMPHP49418 695 aa12.82□□□□□ -0.36
SRSF5-218ENST00000557435 SEPT12Q8IYM1 358 aa12.82□□□□□ -0.36
SRSF5-218ENST00000557435 FAM98CQ17RN3 349 aaKnown RBP12.81□□□□□ -0.36
SRSF5-218ENST00000557435 TOM1L2Q6ZVM7 507 aa12.81□□□□□ -0.36
SRSF5-218ENST00000557435 MORC1Q86VD1 984 aa12.81□□□□□ -0.36
SRSF5-218ENST00000557435 ANKRD24Q8TF21 1146 aa12.81□□□□□ -0.36
SRSF5-218ENST00000557435 INSRP06213 1382 aa12.81□□□□□ -0.36
SRSF5-218ENST00000557435 HSP90AB2PQ58FF8 381 aa12.8□□□□□ -0.36
SRSF5-218ENST00000557435 FLT4P35916 1363 aa12.8□□□□□ -0.36
SRSF5-218ENST00000557435 CSB-PGBD3P0DP91 1061 aa12.79□□□□□ -0.36
SRSF5-218ENST00000557435 CDCA7Q9BWT1 371 aaPredicted RBP12.79□□□□□ -0.36
SRSF5-218ENST00000557435 USP35Q9P2H5 1018 aa12.79□□□□□ -0.36
SRSF5-218ENST00000557435 EMILIN1Q9Y6C2 1016 aa12.79□□□□□ -0.36
SRSF5-218ENST00000557435 THSD7AQ9UPZ6 1657 aa12.79□□□□□ -0.36
SRSF5-218ENST00000557435 PEAK1Q9H792 1746 aa12.79□□□□□ -0.36
SRSF5-218ENST00000557435 EP400Q96L91 3159 aa12.78□□□□□ -0.36
SRSF5-218ENST00000557435 BRWD3Q6RI45 1802 aa12.78□□□□□ -0.36
SRSF5-218ENST00000557435 TNNT2P45379 298 aaPredicted RBP12.77□□□□□ -0.37
SRSF5-218ENST00000557435 CC2D1BQ5T0F9 858 aaKnown RBP12.77□□□□□ -0.37
SRSF5-218ENST00000557435 KRT27Q7Z3Y8 459 aa12.77□□□□□ -0.37
SRSF5-218ENST00000557435 NLRP2Q9NX02 1062 aa12.77□□□□□ -0.37
SRSF5-218ENST00000557435 SMG6Q86US8 1419 aaKnown RBP12.77□□□□□ -0.37
SRSF5-218ENST00000557435 FAM208AQ9UK61 1670 aaKnown RBP12.77□□□□□ -0.37
SRSF5-218ENST00000557435 NBPF6Q5VWK0 638 aa12.76□□□□□ -0.37
SRSF5-218ENST00000557435 NBPF4Q96M43 638 aa12.76□□□□□ -0.37
SRSF5-218ENST00000557435 DISP2A7MBM2 1401 aa12.75□□□□□ -0.37
SRSF5-218ENST00000557435 DDX10Q13206 875 aaKnown RBP12.75□□□□□ -0.37
SRSF5-218ENST00000557435 LTV1Q96GA3 475 aaPredicted RBP12.75□□□□□ -0.37
SRSF5-218ENST00000557435 PARP4Q9UKK3 1724 aaKnown RBP12.75□□□□□ -0.37
SRSF5-218ENST00000557435 ZNF316A6NFI3 1004 aaPredicted RBP12.74□□□□□ -0.37
SRSF5-218ENST00000557435 PPM1GO15355 546 aaPredicted RBP12.74□□□□□ -0.37
SRSF5-218ENST00000557435 C1QBPQ07021 282 aaKnown RBP12.74□□□□□ -0.37
SRSF5-218ENST00000557435 RGPD2P0DJD1 1756 aa12.74□□□□□ -0.37
SRSF5-218ENST00000557435 IL2RBP14784 551 aa12.73□□□□□ -0.37
SRSF5-218ENST00000557435 MTHFSP49914 203 aa12.73□□□□□ -0.37
SRSF5-218ENST00000557435 DDB1Q16531 1140 aa12.73□□□□□ -0.37
SRSF5-218ENST00000557435 CCDC125Q86Z20 511 aa12.73□□□□□ -0.37
SRSF5-218ENST00000557435 UPF1Q92900 1129 aaKnown RBP eCLIP12.73□□□□□ -0.37
SRSF5-218ENST00000557435 WNK3Q9BYP7 1800 aa12.73□□□□□ -0.37
SRSF5-218ENST00000557435 NCAPD2Q15021 1401 aa12.72□□□□□ -0.37
SRSF5-218ENST00000557435 A0A0G2JS52 829 aa12.72□□□□□ -0.37
SRSF5-218ENST00000557435 EXOC5O00471 708 aa12.72□□□□□ -0.37
SRSF5-218ENST00000557435 MYT1Q01538 1121 aa12.72□□□□□ -0.37
SRSF5-218ENST00000557435 PDE3BQ13370 1112 aa12.72□□□□□ -0.37
SRSF5-218ENST00000557435 EIF4A2Q14240 407 aaKnown RBP12.72□□□□□ -0.37
SRSF5-218ENST00000557435 EYA1Q99502 592 aa12.72□□□□□ -0.37
SRSF5-218ENST00000557435 IL13P35225 146 aa12.7□□□□□ -0.38
SRSF5-218ENST00000557435 FAM196AQ6ZSG2 479 aa12.7□□□□□ -0.38
SRSF5-218ENST00000557435 U3KPZ7 1027 aaPredicted RBP12.7□□□□□ -0.38
SRSF5-218ENST00000557435 BCL9O00512 1426 aa12.7□□□□□ -0.38
SRSF5-218ENST00000557435 PARD3Q8TEW0 1356 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms