RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 TMOD3Q9NYL9 352 aa9.96□□□□□ -0.81
CHD8-213ENST00000557364 RBM19Q9Y4C8 960 aaKnown RBP9.96□□□□□ -0.81
CHD8-213ENST00000557364 KRT18P05783 430 aaKnown RBP9.96□□□□□ -0.81
CHD8-213ENST00000557364 PAF1Q8N7H5 531 aa9.96□□□□□ -0.81
CHD8-213ENST00000557364 WASF1Q92558 559 aa9.96□□□□□ -0.81
CHD8-213ENST00000557364 AK7Q96M32 723 aa9.96□□□□□ -0.81
CHD8-213ENST00000557364 DACH1Q9UI36 760 aa9.96□□□□□ -0.81
CHD8-213ENST00000557364 VPS37CA5D8V6 355 aaPredicted RBP9.96□□□□□ -0.81
CHD8-213ENST00000557364 A0A087WZG4 1122 aa9.96□□□□□ -0.82
CHD8-213ENST00000557364 NOL7Q9UMY1 257 aaKnown RBP9.96□□□□□ -0.82
CHD8-213ENST00000557364 FCHSD2O94868 740 aa9.96□□□□□ -0.82
CHD8-213ENST00000557364 KRT32Q14532 448 aa9.96□□□□□ -0.82
CHD8-213ENST00000557364 BMP2KQ9NSY1 1161 aaPredicted RBP9.96□□□□□ -0.82
CHD8-213ENST00000557364 CEP126Q9P2H0 1117 aa9.96□□□□□ -0.82
CHD8-213ENST00000557364 BTBD11A6QL63 1104 aa9.96□□□□□ -0.82
CHD8-213ENST00000557364 MPHOSPH10O00566 681 aaKnown RBP9.95□□□□□ -0.82
CHD8-213ENST00000557364 PDE3AQ14432 1141 aa9.95□□□□□ -0.82
CHD8-213ENST00000557364 CRBNQ96SW2 442 aa9.95□□□□□ -0.82
CHD8-213ENST00000557364 RUFY1Q96T51 708 aa9.95□□□□□ -0.82
CHD8-213ENST00000557364 GRIN2AQ12879 1464 aa9.95□□□□□ -0.82
CHD8-213ENST00000557364 ATF7IPQ6VMQ6 1270 aa9.95□□□□□ -0.82
CHD8-213ENST00000557364 TOM1O60784 492 aa9.95□□□□□ -0.82
CHD8-213ENST00000557364 SULT6B1Q6IMI4 303 aa9.95□□□□□ -0.82
CHD8-213ENST00000557364 KINO60870 393 aaKnown RBP9.95□□□□□ -0.82
CHD8-213ENST00000557364 CABP1Q9NZU7 370 aa9.95□□□□□ -0.82
CHD8-213ENST00000557364 GNAT3A8MTJ3 354 aa9.94□□□□□ -0.82
CHD8-213ENST00000557364 CAVIN4Q5BKX8 364 aa9.94□□□□□ -0.82
CHD8-213ENST00000557364 MPHOSPH6Q99547 160 aaKnown RBP9.94□□□□□ -0.82
CHD8-213ENST00000557364 MSH6P52701 1360 aa9.94□□□□□ -0.82
CHD8-213ENST00000557364 CCDC69A6NI79 296 aa9.94□□□□□ -0.82
CHD8-213ENST00000557364 RAPGEF3O95398 923 aa9.94□□□□□ -0.82
CHD8-213ENST00000557364 TCP11L2Q8N4U5 519 aa9.94□□□□□ -0.82
CHD8-213ENST00000557364 PRXQ9BXM0 1461 aa9.94□□□□□ -0.82
CHD8-213ENST00000557364 NAP1L1P55209 391 aaKnown RBP9.94□□□□□ -0.82
CHD8-213ENST00000557364 SDF4Q9BRK5 362 aa9.94□□□□□ -0.82
CHD8-213ENST00000557364 HSP90AB2PQ58FF8 381 aa9.94□□□□□ -0.82
CHD8-213ENST00000557364 AEBP1Q8IUX7 1158 aa9.94□□□□□ -0.82
CHD8-213ENST00000557364 PPP4R3BQ5MIZ7 849 aa9.93□□□□□ -0.82
CHD8-213ENST00000557364 EHMT1Q9H9B1 1298 aa9.93□□□□□ -0.82
CHD8-213ENST00000557364 LRRCC1Q9C099 1032 aa9.93□□□□□ -0.82
CHD8-213ENST00000557364 ZFYVE27Q5T4F4 411 aa9.93□□□□□ -0.82
CHD8-213ENST00000557364 HOMER1Q86YM7 354 aa9.93□□□□□ -0.82
CHD8-213ENST00000557364 ARGLU1Q9NWB6 273 aaPredicted RBP9.93□□□□□ -0.82
CHD8-213ENST00000557364 MBD3O95983 291 aa9.93□□□□□ -0.82
CHD8-213ENST00000557364 CCAR2Q8N163 923 aaKnown RBP9.93□□□□□ -0.82
CHD8-213ENST00000557364 FOXD4L1Q9NU39 408 aa9.93□□□□□ -0.82
CHD8-213ENST00000557364 TNNT3P45378 269 aaPredicted RBP9.93□□□□□ -0.82
CHD8-213ENST00000557364 RABEP1Q15276 862 aa9.93□□□□□ -0.82
CHD8-213ENST00000557364 ZRSR2Q15696 482 aaKnown RBP9.93□□□□□ -0.82
CHD8-213ENST00000557364 ZSCAN29Q8IWY8 852 aaPredicted RBP9.93□□□□□ -0.82
CHD8-213ENST00000557364 NGLY1Q96IV0 654 aa9.93□□□□□ -0.82
CHD8-213ENST00000557364 DNAJC2Q99543 621 aaKnown RBP9.93□□□□□ -0.82
CHD8-213ENST00000557364 IL27Q8NEV9 243 aa9.93□□□□□ -0.82
CHD8-213ENST00000557364 PPP4R3AQ6IN85 833 aa9.92□□□□□ -0.82
CHD8-213ENST00000557364 LARP1Q6PKG0 1096 aaKnown RBP9.92□□□□□ -0.82
CHD8-213ENST00000557364 ZNHIT6Q9NWK9 470 aaKnown RBP9.92□□□□□ -0.82
CHD8-213ENST00000557364 PDE4AP27815 886 aa9.92□□□□□ -0.82
CHD8-213ENST00000557364 ERCC4Q92889 916 aaPredicted RBP9.92□□□□□ -0.82
CHD8-213ENST00000557364 NUDT16Q96DE0 195 aaKnown RBP9.92□□□□□ -0.82
CHD8-213ENST00000557364 NSD2O96028 1365 aa9.92□□□□□ -0.82
CHD8-213ENST00000557364 ABCC11Q96J66 1382 aa9.92□□□□□ -0.82
CHD8-213ENST00000557364 TTC21BQ7Z4L5 1316 aa9.92□□□□□ -0.82
CHD8-213ENST00000557364 ATP2B2Q01814 1243 aa9.92□□□□□ -0.82
CHD8-213ENST00000557364 ANKRD18AQ8IVF6 992 aa9.92□□□□□ -0.82
CHD8-213ENST00000557364 UBAC1Q9BSL1 405 aa9.92□□□□□ -0.82
CHD8-213ENST00000557364 PPP2R1AP30153 589 aa9.92□□□□□ -0.82
CHD8-213ENST00000557364 TEX35Q5T0J7 233 aa9.92□□□□□ -0.82
CHD8-213ENST00000557364 SLC26A8Q96RN1 970 aa9.92□□□□□ -0.82
CHD8-213ENST00000557364 IFIT1P09914 478 aaKnown RBP9.92□□□□□ -0.82
CHD8-213ENST00000557364 SLC4A2P04920 1241 aa9.91□□□□□ -0.82
CHD8-213ENST00000557364 RPGRQ92834 1020 aaKnown RBP9.91□□□□□ -0.82
CHD8-213ENST00000557364 FAM177BA6PVY3 158 aa9.91□□□□□ -0.82
CHD8-213ENST00000557364 FOXD4L5Q5VV16 416 aaPredicted RBP9.91□□□□□ -0.82
CHD8-213ENST00000557364 FOXD4L4Q8WXT5 416 aaPredicted RBP9.91□□□□□ -0.82
CHD8-213ENST00000557364 DCTN1Q14203 1278 aa9.91□□□□□ -0.82
CHD8-213ENST00000557364 TRAF1Q13077 416 aa9.91□□□□□ -0.82
CHD8-213ENST00000557364 PTPN23Q9H3S7 1636 aa9.91□□□□□ -0.82
CHD8-213ENST00000557364 C22orf23Q9BZE7 217 aa9.91□□□□□ -0.82
CHD8-213ENST00000557364 CYP46A1Q9Y6A2 500 aa9.91□□□□□ -0.82
CHD8-213ENST00000557364 EXOC5O00471 708 aa9.9□□□□□ -0.82
CHD8-213ENST00000557364 ERLIN2O94905 339 aa9.9□□□□□ -0.82
CHD8-213ENST00000557364 CAMSAP2Q08AD1 1489 aa9.9□□□□□ -0.82
CHD8-213ENST00000557364 CCDC196A0A1B0GTZ2 297 aa9.9□□□□□ -0.82
CHD8-213ENST00000557364 LNPKQ9C0E8 428 aa9.9□□□□□ -0.82
CHD8-213ENST00000557364 LRP2BPQ9P2M1 347 aa9.9□□□□□ -0.82
CHD8-213ENST00000557364 MAP3K1Q13233 1512 aa9.9□□□□□ -0.82
CHD8-213ENST00000557364 PPP1R12BO60237 982 aaPredicted RBP9.9□□□□□ -0.82
CHD8-213ENST00000557364 RAB11FIP3O75154 756 aa9.9□□□□□ -0.82
CHD8-213ENST00000557364 SMC2O95347 1197 aa9.9□□□□□ -0.82
CHD8-213ENST00000557364 POTEJP0CG39 1038 aa9.9□□□□□ -0.82
CHD8-213ENST00000557364 TDO2P48775 406 aa9.9□□□□□ -0.82
CHD8-213ENST00000557364 CEP131Q9UPN4 1083 aa9.9□□□□□ -0.82
CHD8-213ENST00000557364 RRP12Q5JTH9 1297 aaKnown RBP9.9□□□□□ -0.82
CHD8-213ENST00000557364 FAM13BQ9NYF5 915 aa9.9□□□□□ -0.83
CHD8-213ENST00000557364 SEC63Q9UGP8 760 aaKnown RBP9.89□□□□□ -0.83
CHD8-213ENST00000557364 FANCAO15360 1455 aa9.89□□□□□ -0.83
CHD8-213ENST00000557364 ARAP1Q96P48 1450 aa9.89□□□□□ -0.83
CHD8-213ENST00000557364 ZNF76P36508 570 aa9.89□□□□□ -0.83
CHD8-213ENST00000557364 HYPKQ9NX55 129 aa9.89□□□□□ -0.83
CHD8-213ENST00000557364 PHF8Q9UPP1 1060 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms