RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 FAM196AQ6ZSG2 479 aa20.1■□□□□ 0.81
SNX6-210ENST00000557341 KCNH5Q8NCM2 988 aa20.1■□□□□ 0.81
SNX6-210ENST00000557341 PDE3BQ13370 1112 aa20.09■□□□□ 0.81
SNX6-210ENST00000557341 EN1Q05925 392 aaPredicted RBP20.07■□□□□ 0.8
SNX6-210ENST00000557341 WDR17Q8IZU2 1322 aa20.06■□□□□ 0.8
SNX6-210ENST00000557341 EDC4Q6P2E9 1401 aaKnown RBP20.06■□□□□ 0.8
SNX6-210ENST00000557341 FAM208AQ9UK61 1670 aaKnown RBP20.06■□□□□ 0.8
SNX6-210ENST00000557341 OVOS2A0A0G2JMS6 1433 aa20.05■□□□□ 0.8
SNX6-210ENST00000557341 OVOS2A0A0J9YW53 1432 aa20.05■□□□□ 0.8
SNX6-210ENST00000557341 OVOS2Q6IE36 1432 aa20.05■□□□□ 0.8
SNX6-210ENST00000557341 SOX12O15370 315 aa20.05■□□□□ 0.8
SNX6-210ENST00000557341 TRIM37O94972 964 aa20.05■□□□□ 0.8
SNX6-210ENST00000557341 ARHGEF25Q86VW2 580 aa20.05■□□□□ 0.8
SNX6-210ENST00000557341 USP31Q70CQ4 1352 aa20.05■□□□□ 0.8
SNX6-210ENST00000557341 PARD3Q8TEW0 1356 aa20.05■□□□□ 0.8
SNX6-210ENST00000557341 TOM1L2Q6ZVM7 507 aa20.04■□□□□ 0.8
SNX6-210ENST00000557341 TMC1Q8TDI8 760 aa20.04■□□□□ 0.8
SNX6-210ENST00000557341 HDGFL2Q7Z4V5 671 aaPredicted RBP20.03■□□□□ 0.8
SNX6-210ENST00000557341 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.03■□□□□ 0.8
SNX6-210ENST00000557341 A0A1W2PP64 1363 aa20.03■□□□□ 0.8
SNX6-210ENST00000557341 NINLQ9Y2I6 1382 aa20.03■□□□□ 0.8
SNX6-210ENST00000557341 AXIN2Q9Y2T1 843 aa20.02■□□□□ 0.8
SNX6-210ENST00000557341 PUS7Q96PZ0 661 aaKnown RBP20.01■□□□□ 0.79
SNX6-210ENST00000557341 KIF20BQ96Q89 1820 aa20.01■□□□□ 0.79
SNX6-210ENST00000557341 PSDA5PKW4 1024 aaPredicted RBP20■□□□□ 0.79
SNX6-210ENST00000557341 C11orf95C9JLR9 678 aaPredicted RBP20■□□□□ 0.79
SNX6-210ENST00000557341 EZH2Q15910 746 aaKnown RBP20■□□□□ 0.79
SNX6-210ENST00000557341 SLC12A5Q9H2X9 1139 aa20■□□□□ 0.79
SNX6-210ENST00000557341 TERF2IPQ9NYB0 399 aa20■□□□□ 0.79
SNX6-210ENST00000557341 APBA3O96018 575 aa19.99■□□□□ 0.79
SNX6-210ENST00000557341 DDB1Q16531 1140 aa19.99■□□□□ 0.79
SNX6-210ENST00000557341 NME9Q86XW9 330 aa19.99■□□□□ 0.79
SNX6-210ENST00000557341 ST20-MTHFSA0A0A6YYL1 179 aa19.98■□□□□ 0.79
SNX6-210ENST00000557341 CSB-PGBD3P0DP91 1061 aa19.98■□□□□ 0.79
SNX6-210ENST00000557341 CAMKK2Q96RR4 588 aa19.98■□□□□ 0.79
SNX6-210ENST00000557341 TESK2Q96S53 571 aa19.98■□□□□ 0.79
SNX6-210ENST00000557341 CCDC7Q96M83 1385 aa19.97■□□□□ 0.79
SNX6-210ENST00000557341 SLC24A1O60721 1099 aa19.97■□□□□ 0.79
SNX6-210ENST00000557341 CDCA7Q9BWT1 371 aaPredicted RBP19.97■□□□□ 0.79
SNX6-210ENST00000557341 CARD10Q9BWT7 1032 aa19.97■□□□□ 0.79
SNX6-210ENST00000557341 MYOM1P52179 1685 aa19.97■□□□□ 0.79
SNX6-210ENST00000557341 NHSQ6T4R5 1651 aa19.97■□□□□ 0.79
SNX6-210ENST00000557341 USP47Q96K76 1375 aa19.96■□□□□ 0.79
SNX6-210ENST00000557341 TNS2Q63HR2 1409 aa19.95■□□□□ 0.78
SNX6-210ENST00000557341 RGPD2P0DJD1 1756 aa19.95■□□□□ 0.78
SNX6-210ENST00000557341 R3HDM1Q15032 1099 aaKnown RBP19.94■□□□□ 0.78
SNX6-210ENST00000557341 ERBB3P21860 1342 aa19.94■□□□□ 0.78
SNX6-210ENST00000557341 BCL9O00512 1426 aa19.93■□□□□ 0.78
SNX6-210ENST00000557341 ANKRD36BQ8N2N9 1353 aa19.92■□□□□ 0.78
SNX6-210ENST00000557341 KAT6BQ8WYB5 2073 aa19.9■□□□□ 0.78
SNX6-210ENST00000557341 BTAF1O14981 1849 aa19.9■□□□□ 0.78
SNX6-210ENST00000557341 TMF1P82094 1093 aa19.89■□□□□ 0.77
SNX6-210ENST00000557341 MARCH10Q8NA82 808 aaPredicted RBP19.88■□□□□ 0.77
SNX6-210ENST00000557341 SHANK3Q9BYB0 1731 aa19.88■□□□□ 0.77
SNX6-210ENST00000557341 CLSPNQ9HAW4 1339 aa19.87■□□□□ 0.77
SNX6-210ENST00000557341 CASZ1Q86V15 1759 aa19.87■□□□□ 0.77
SNX6-210ENST00000557341 EXOC5O00471 708 aa19.86■□□□□ 0.77
SNX6-210ENST00000557341 NBPF14Q5TI25 921 aa19.86■□□□□ 0.77
SNX6-210ENST00000557341 ANKRD24Q8TF21 1146 aa19.86■□□□□ 0.77
SNX6-210ENST00000557341 COG3Q96JB2 828 aa19.86■□□□□ 0.77
SNX6-210ENST00000557341 BCL11BQ9C0K0 894 aaPredicted RBP19.86■□□□□ 0.77
SNX6-210ENST00000557341 NLRP2Q9NX02 1062 aa19.86■□□□□ 0.77
SNX6-210ENST00000557341 DOT1LQ8TEK3 1739 aa19.85■□□□□ 0.77
SNX6-210ENST00000557341 PLSCR1O15162 318 aa19.84■□□□□ 0.77
SNX6-210ENST00000557341 TIMELESSQ9UNS1 1208 aa19.84■□□□□ 0.77
SNX6-210ENST00000557341 IL2RBP14784 551 aa19.83■□□□□ 0.77
SNX6-210ENST00000557341 CDCA8Q53HL2 280 aa19.83■□□□□ 0.77
SNX6-210ENST00000557341 ANKRD26Q9UPS8 1709 aa19.82■□□□□ 0.76
SNX6-210ENST00000557341 IP6K1Q92551 441 aa19.82■□□□□ 0.76
SNX6-210ENST00000557341 RTL1A6NKG5 1358 aa19.82■□□□□ 0.76
SNX6-210ENST00000557341 PTF1AQ7RTS3 328 aa19.81■□□□□ 0.76
SNX6-210ENST00000557341 MAP3K19Q56UN5 1328 aa19.8■□□□□ 0.76
SNX6-210ENST00000557341 PCGF6Q9BYE7 350 aa19.8■□□□□ 0.76
SNX6-210ENST00000557341 PAPPAQ13219 1627 aa19.79■□□□□ 0.76
SNX6-210ENST00000557341 MAP2P11137 1827 aaKnown RBP19.79■□□□□ 0.76
SNX6-210ENST00000557341 HOXC9P31274 260 aa19.78■□□□□ 0.76
SNX6-210ENST00000557341 AMPHP49418 695 aa19.77■□□□□ 0.76
SNX6-210ENST00000557341 LTV1Q96GA3 475 aaPredicted RBP19.77■□□□□ 0.76
SNX6-210ENST00000557341 SMG6Q86US8 1419 aaKnown RBP19.76■□□□□ 0.75
SNX6-210ENST00000557341 LY75O60449 1722 aa19.76■□□□□ 0.75
SNX6-210ENST00000557341 QSER1Q2KHR3 1735 aa19.76■□□□□ 0.75
SNX6-210ENST00000557341 FYB1O15117 783 aa19.75■□□□□ 0.75
SNX6-210ENST00000557341 GGNBP2Q9H3C7 697 aa19.75■□□□□ 0.75
SNX6-210ENST00000557341 ANO8Q9HCE9 1232 aaPredicted RBP19.75■□□□□ 0.75
SNX6-210ENST00000557341 NSD3Q9BZ95 1437 aa19.75■□□□□ 0.75
SNX6-210ENST00000557341 MEGF6O75095 1541 aa19.74■□□□□ 0.75
SNX6-210ENST00000557341 KCNQ2O43526 872 aa19.73■□□□□ 0.75
SNX6-210ENST00000557341 FBLN1P23142 703 aa19.73■□□□□ 0.75
SNX6-210ENST00000557341 ACSBG1Q96GR2 724 aa19.73■□□□□ 0.75
SNX6-210ENST00000557341 TUBGCP6Q96RT7 1819 aa19.73■□□□□ 0.75
SNX6-210ENST00000557341 RRS1Q15050 365 aaKnown RBP19.72■□□□□ 0.75
SNX6-210ENST00000557341 TXNRD1Q16881 649 aa19.72■□□□□ 0.75
SNX6-210ENST00000557341 PKD1L3Q7Z443 1732 aa19.72■□□□□ 0.75
SNX6-210ENST00000557341 PROM2Q8N271 834 aa19.72■□□□□ 0.75
SNX6-210ENST00000557341 KIF24Q5T7B8 1368 aa19.71■□□□□ 0.75
SNX6-210ENST00000557341 SPON1Q9HCB6 807 aa19.71■□□□□ 0.75
SNX6-210ENST00000557341 FLT4P35916 1363 aa19.7■□□□□ 0.74
SNX6-210ENST00000557341 INSRP06213 1382 aa19.69■□□□□ 0.74
SNX6-210ENST00000557341 ITGB4P16144 1822 aa19.68■□□□□ 0.74
SNX6-210ENST00000557341 DDX54Q8TDD1 881 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms