RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 ARHGEF25Q86VW2 580 aa17.74■□□□□ 0.43
SNX6-209ENST00000557265 SLIT3O75094 1523 aa17.73■□□□□ 0.43
SNX6-209ENST00000557265 SOX12O15370 315 aa17.73■□□□□ 0.43
SNX6-209ENST00000557265 CSB-PGBD3P0DP91 1061 aa17.73■□□□□ 0.43
SNX6-209ENST00000557265 EVC2Q86UK5 1308 aa17.72■□□□□ 0.43
SNX6-209ENST00000557265 ZBTB7AO95365 584 aa17.72■□□□□ 0.43
SNX6-209ENST00000557265 KCNH5Q8NCM2 988 aa17.72■□□□□ 0.43
SNX6-209ENST00000557265 CARD10Q9BWT7 1032 aa17.72■□□□□ 0.43
SNX6-209ENST00000557265 PEAK1Q9H792 1746 aa17.72■□□□□ 0.43
SNX6-209ENST00000557265 TTC21BQ7Z4L5 1316 aa17.72■□□□□ 0.43
SNX6-209ENST00000557265 ZNF692Q9BU19 519 aaPredicted RBP17.71■□□□□ 0.43
SNX6-209ENST00000557265 CPSF1Q10570 1443 aaKnown RBP17.71■□□□□ 0.43
SNX6-209ENST00000557265 EXOC5O00471 708 aa17.7■□□□□ 0.42
SNX6-209ENST00000557265 L3MBTL2Q969R5 705 aa17.7■□□□□ 0.42
SNX6-209ENST00000557265 ATF5Q9Y2D1 282 aaPredicted RBP17.7■□□□□ 0.42
SNX6-209ENST00000557265 BCL9O00512 1426 aa17.7■□□□□ 0.42
SNX6-209ENST00000557265 LRRC37A3O60309 1634 aa17.69■□□□□ 0.42
SNX6-209ENST00000557265 TXNRD1Q16881 649 aa17.69■□□□□ 0.42
SNX6-209ENST00000557265 STK32BQ9NY57 414 aa17.69■□□□□ 0.42
SNX6-209ENST00000557265 PTGER2P43116 358 aa17.68■□□□□ 0.42
SNX6-209ENST00000557265 SLC15A2Q16348 729 aa17.66■□□□□ 0.42
SNX6-209ENST00000557265 TTC21AQ8NDW8 1320 aa17.66■□□□□ 0.42
SNX6-209ENST00000557265 COL18A1P39060 1754 aa17.66■□□□□ 0.42
SNX6-209ENST00000557265 PIK3C2AO00443 1686 aa17.65■□□□□ 0.42
SNX6-209ENST00000557265 QRICH2Q9H0J4 1663 aa17.65■□□□□ 0.42
SNX6-209ENST00000557265 RGPD3A6NKT7 1758 aaPredicted RBP17.64■□□□□ 0.41
SNX6-209ENST00000557265 RGPD4Q7Z3J3 1758 aa17.64■□□□□ 0.41
SNX6-209ENST00000557265 CCDC7Q96M83 1385 aa17.64■□□□□ 0.41
SNX6-209ENST00000557265 FHDC1Q9C0D6 1143 aaPredicted RBP17.63■□□□□ 0.41
SNX6-209ENST00000557265 KTN1Q86UP2 1357 aaKnown RBP17.63■□□□□ 0.41
SNX6-209ENST00000557265 ACSBG1Q96GR2 724 aa17.62■□□□□ 0.41
SNX6-209ENST00000557265 SIN3AQ96ST3 1273 aa17.62■□□□□ 0.41
SNX6-209ENST00000557265 SYT17Q9BSW7 474 aa17.62■□□□□ 0.41
SNX6-209ENST00000557265 MTFR1LQ9H019 292 aa17.62■□□□□ 0.41
SNX6-209ENST00000557265 ROCK2O75116 1388 aaKnown RBP17.62■□□□□ 0.41
SNX6-209ENST00000557265 CASZ1Q86V15 1759 aa17.61■□□□□ 0.41
SNX6-209ENST00000557265 SBF2Q86WG5 1849 aa17.61■□□□□ 0.41
SNX6-209ENST00000557265 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.61■□□□□ 0.41
SNX6-209ENST00000557265 NLRP2Q9NX02 1062 aa17.61■□□□□ 0.41
SNX6-209ENST00000557265 ZNF784Q8NCA9 323 aaPredicted RBP17.6■□□□□ 0.41
SNX6-209ENST00000557265 TNS2Q63HR2 1409 aa17.59■□□□□ 0.41
SNX6-209ENST00000557265 NEUROD1Q13562 356 aa17.59■□□□□ 0.41
SNX6-209ENST00000557265 SGIP1Q9BQI5 828 aa17.59■□□□□ 0.41
SNX6-209ENST00000557265 TRPM1Q7Z4N2 1603 aa17.58■□□□□ 0.41
SNX6-209ENST00000557265 NFAT5O94916 1531 aa17.58■□□□□ 0.41
SNX6-209ENST00000557265 ERBB3P21860 1342 aa17.57■□□□□ 0.4
SNX6-209ENST00000557265 IL2RBP14784 551 aa17.57■□□□□ 0.4
SNX6-209ENST00000557265 NME9Q86XW9 330 aa17.57■□□□□ 0.4
SNX6-209ENST00000557265 ARXQ96QS3 562 aa17.57■□□□□ 0.4
SNX6-209ENST00000557265 USP31Q70CQ4 1352 aa17.56■□□□□ 0.4
SNX6-209ENST00000557265 MYOM1P52179 1685 aa17.56■□□□□ 0.4
SNX6-209ENST00000557265 ANKRD24Q8TF21 1146 aa17.55■□□□□ 0.4
SNX6-209ENST00000557265 WNK3Q9BYP7 1800 aa17.54■□□□□ 0.4
SNX6-209ENST00000557265 TMC1Q8TDI8 760 aa17.54■□□□□ 0.4
SNX6-209ENST00000557265 AKAP12Q02952 1782 aa17.53■□□□□ 0.4
SNX6-209ENST00000557265 ABCC6O95255 1503 aa17.53■□□□□ 0.4
SNX6-209ENST00000557265 ZNF827Q17R98 1081 aa17.53■□□□□ 0.4
SNX6-209ENST00000557265 LRRC4BQ9NT99 713 aa17.53■□□□□ 0.4
SNX6-209ENST00000557265 RGPD5Q99666 1765 aa17.53■□□□□ 0.4
SNX6-209ENST00000557265 UTRNP46939 3433 aa17.53■□□□□ 0.4
SNX6-209ENST00000557265 SBNO2Q9Y2G9 1366 aa17.53■□□□□ 0.4
SNX6-209ENST00000557265 HDGFL2Q7Z4V5 671 aaPredicted RBP17.52■□□□□ 0.4
SNX6-209ENST00000557265 SLC12A5Q9H2X9 1139 aa17.51■□□□□ 0.39
SNX6-209ENST00000557265 DDX54Q8TDD1 881 aaKnown RBP17.5■□□□□ 0.39
SNX6-209ENST00000557265 CD163L1Q9NR16 1453 aa17.5■□□□□ 0.39
SNX6-209ENST00000557265 AKT1S1Q96B36 256 aa17.49■□□□□ 0.39
SNX6-209ENST00000557265 CARD11Q9BXL7 1154 aa17.49■□□□□ 0.39
SNX6-209ENST00000557265 NHSQ6T4R5 1651 aa17.48■□□□□ 0.39
SNX6-209ENST00000557265 GPR162Q16538 588 aa17.48■□□□□ 0.39
SNX6-209ENST00000557265 MAP3K5Q99683 1374 aa17.48■□□□□ 0.39
SNX6-209ENST00000557265 SLC27A3Q5K4L6 730 aa17.47■□□□□ 0.39
SNX6-209ENST00000557265 KLHL34Q8N239 644 aa17.47■□□□□ 0.39
SNX6-209ENST00000557265 IP6K1Q92551 441 aa17.47■□□□□ 0.39
SNX6-209ENST00000557265 LTV1Q96GA3 475 aaPredicted RBP17.47■□□□□ 0.39
SNX6-209ENST00000557265 TERF2IPQ9NYB0 399 aa17.47■□□□□ 0.39
SNX6-209ENST00000557265 SLC16A10Q8TF71 515 aa17.46■□□□□ 0.39
SNX6-209ENST00000557265 EDC4Q6P2E9 1401 aaKnown RBP17.46■□□□□ 0.39
SNX6-209ENST00000557265 SENP3-EIF4A1A0A087X0R7 540 aa17.45■□□□□ 0.38
SNX6-209ENST00000557265 POLD1P28340 1107 aa17.45■□□□□ 0.38
SNX6-209ENST00000557265 KCNQ4P56696 695 aa17.45■□□□□ 0.38
SNX6-209ENST00000557265 C1QTNF8P60827 252 aa17.45■□□□□ 0.38
SNX6-209ENST00000557265 SYTL4Q96C24 671 aaPredicted RBP17.45■□□□□ 0.38
SNX6-209ENST00000557265 TFCP2L1Q9NZI6 479 aa17.45■□□□□ 0.38
SNX6-209ENST00000557265 PAPPAQ13219 1627 aa17.45■□□□□ 0.38
SNX6-209ENST00000557265 PNPLA7Q6ZV29 1317 aa17.45■□□□□ 0.38
SNX6-209ENST00000557265 MON2Q7Z3U7 1717 aa17.44■□□□□ 0.38
SNX6-209ENST00000557265 PRIM1P49642 420 aaKnown RBP17.44■□□□□ 0.38
SNX6-209ENST00000557265 A0A1W2PP64 1363 aa17.43■□□□□ 0.38
SNX6-209ENST00000557265 PELP1Q8IZL8 1130 aaKnown RBP17.43■□□□□ 0.38
SNX6-209ENST00000557265 PUS7Q96PZ0 661 aaKnown RBP17.41■□□□□ 0.38
SNX6-209ENST00000557265 BTAF1O14981 1849 aa17.41■□□□□ 0.38
SNX6-209ENST00000557265 FBLN1P23142 703 aa17.4■□□□□ 0.38
SNX6-209ENST00000557265 HOXC9P31274 260 aa17.4■□□□□ 0.38
SNX6-209ENST00000557265 COG3Q96JB2 828 aa17.4■□□□□ 0.38
SNX6-209ENST00000557265 MAP3K19Q56UN5 1328 aa17.4■□□□□ 0.38
SNX6-209ENST00000557265 ANKRD36BQ8N2N9 1353 aa17.4■□□□□ 0.38
SNX6-209ENST00000557265 USP54Q70EL1 1684 aa17.39■□□□□ 0.37
SNX6-209ENST00000557265 AMPHP49418 695 aa17.39■□□□□ 0.37
SNX6-209ENST00000557265 NLGN2Q8NFZ4 835 aa17.39■□□□□ 0.37
SNX6-209ENST00000557265 ZCRB1Q8TBF4 217 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms