RNA–Protein interactions for RNA: ENST00000557021.5

UBE2V1-222, Transcript of ubiquitin conjugating enzyme E2 V1, human

TSL 5 BASIC

Gene UBE2V1, Length 2,258 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2V1-222	ENST00000557021	CSB-PGBD3	P0DP91	1061 aa		18.3	■□□□□ 0.52
UBE2V1-222	ENST00000557021	USHBP1	Q8N6Y0	703 aa		18.3	■□□□□ 0.52
UBE2V1-222	ENST00000557021	USP21	Q9UK80	565 aa		18.3	■□□□□ 0.52
UBE2V1-222	ENST00000557021	MAP2	P11137	1827 aa	Known RBP	18.29	■□□□□ 0.52
UBE2V1-222	ENST00000557021	LARP1	Q6PKG0	1096 aa	Known RBP	18.29	■□□□□ 0.52
UBE2V1-222	ENST00000557021	RALBP1	Q15311	655 aa		18.29	■□□□□ 0.52
UBE2V1-222	ENST00000557021	CAMTA1	Q9Y6Y1	1673 aa		18.28	■□□□□ 0.52
UBE2V1-222	ENST00000557021	ANKRD24	Q8TF21	1146 aa		18.28	■□□□□ 0.52
UBE2V1-222	ENST00000557021	IP6K1	Q92551	441 aa		18.28	■□□□□ 0.52
UBE2V1-222	ENST00000557021	LTN1	O94822	1766 aa		18.28	■□□□□ 0.52
UBE2V1-222	ENST00000557021	ANKRD26	Q9UPS8	1709 aa		18.28	■□□□□ 0.52
UBE2V1-222	ENST00000557021	CPD	O75976	1380 aa		18.28	■□□□□ 0.52
UBE2V1-222	ENST00000557021	PEAK1	Q9H792	1746 aa		18.28	■□□□□ 0.52
UBE2V1-222	ENST00000557021	PHF23	Q9BUL5	403 aa	Predicted RBP	18.28	■□□□□ 0.52
UBE2V1-222	ENST00000557021	SENP3-EIF4A1	A0A087X0R7	540 aa		18.27	■□□□□ 0.52
UBE2V1-222	ENST00000557021	AATK	Q6ZMQ8	1374 aa		18.27	■□□□□ 0.51
UBE2V1-222	ENST00000557021	MYBBP1A	Q9BQG0	1328 aa	Known RBP	18.26	■□□□□ 0.51
UBE2V1-222	ENST00000557021	NLRP2	Q9NX02	1062 aa		18.26	■□□□□ 0.51
UBE2V1-222	ENST00000557021	TOM1L2	Q6ZVM7	507 aa		18.25	■□□□□ 0.51
UBE2V1-222	ENST00000557021	RGS17	Q9UGC6	210 aa	Predicted RBP	18.25	■□□□□ 0.51
UBE2V1-222	ENST00000557021	RGPD5	Q99666	1765 aa		18.25	■□□□□ 0.51
UBE2V1-222	ENST00000557021	FLT4	P35916	1363 aa		18.25	■□□□□ 0.51
UBE2V1-222	ENST00000557021	EP400	Q96L91	3159 aa		18.25	■□□□□ 0.51
UBE2V1-222	ENST00000557021	EIF4A2	Q14240	407 aa	Known RBP	18.25	■□□□□ 0.51
UBE2V1-222	ENST00000557021	USP54	Q70EL1	1684 aa		18.25	■□□□□ 0.51
UBE2V1-222	ENST00000557021	BCL9L	Q86UU0	1499 aa		18.24	■□□□□ 0.51
UBE2V1-222	ENST00000557021	U2SURP	O15042	1029 aa	Known RBP	18.24	■□□□□ 0.51
UBE2V1-222	ENST00000557021	FNBP4	Q8N3X1	1017 aa	Predicted RBP	18.24	■□□□□ 0.51
UBE2V1-222	ENST00000557021	ERBB3	P21860	1342 aa		18.23	■□□□□ 0.51
UBE2V1-222	ENST00000557021	NBPF6	Q5VWK0	638 aa		18.23	■□□□□ 0.51
UBE2V1-222	ENST00000557021	UNC5CL	Q8IV45	518 aa		18.23	■□□□□ 0.51
UBE2V1-222	ENST00000557021	NBPF4	Q96M43	638 aa		18.23	■□□□□ 0.51
UBE2V1-222	ENST00000557021	HMOX1	P09601	288 aa		18.22	■□□□□ 0.51
UBE2V1-222	ENST00000557021	QTRT2	Q9H974	415 aa	Known RBP	18.22	■□□□□ 0.51
UBE2V1-222	ENST00000557021	COL5A2	P05997	1499 aa	Predicted RBP	18.22	■□□□□ 0.51
UBE2V1-222	ENST00000557021	SLIT2	O94813	1529 aa		18.21	■□□□□ 0.51
UBE2V1-222	ENST00000557021	AEBP1	Q8IUX7	1158 aa		18.2	■□□□□ 0.5
UBE2V1-222	ENST00000557021	EYA1	Q99502	592 aa		18.2	■□□□□ 0.5
UBE2V1-222	ENST00000557021	MRS2	Q9HD23	443 aa		18.2	■□□□□ 0.5
UBE2V1-222	ENST00000557021	COL18A1	P39060	1754 aa		18.2	■□□□□ 0.5
UBE2V1-222	ENST00000557021	INSR	P06213	1382 aa		18.2	■□□□□ 0.5
UBE2V1-222	ENST00000557021	PLCH1	Q4KWH8	1693 aa		18.2	■□□□□ 0.5
UBE2V1-222	ENST00000557021	DIAPH1	O60610	1272 aa	Known RBP	18.2	■□□□□ 0.5
UBE2V1-222	ENST00000557021	POTEA	Q6S8J7	498 aa		18.2	■□□□□ 0.5
UBE2V1-222	ENST00000557021		A0A0G2JS52	829 aa		18.19	■□□□□ 0.5
UBE2V1-222	ENST00000557021	IL13	P35225	146 aa		18.19	■□□□□ 0.5
UBE2V1-222	ENST00000557021	MYT1	Q01538	1121 aa		18.19	■□□□□ 0.5
UBE2V1-222	ENST00000557021	COL14A1	Q05707	1796 aa	Known RBP	18.19	■□□□□ 0.5
UBE2V1-222	ENST00000557021	LMO7	Q8WWI1	1683 aa		18.19	■□□□□ 0.5
UBE2V1-222	ENST00000557021	WDR17	Q8IZU2	1322 aa		18.18	■□□□□ 0.5
UBE2V1-222	ENST00000557021	FAM98C	Q17RN3	349 aa	Known RBP	18.18	■□□□□ 0.5
UBE2V1-222	ENST00000557021	CFAP53	Q96M91	514 aa		18.18	■□□□□ 0.5
UBE2V1-222	ENST00000557021	RTL1	A6NKG5	1358 aa		18.17	■□□□□ 0.5
UBE2V1-222	ENST00000557021	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.16	■□□□□ 0.5
UBE2V1-222	ENST00000557021	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.16	■□□□□ 0.5	5e-7	■■■■□ 21.6
UBE2V1-222	ENST00000557021	SULT6B1	Q6IMI4	303 aa		18.16	■□□□□ 0.5
UBE2V1-222	ENST00000557021	SMG6	Q86US8	1419 aa	Known RBP	18.16	■□□□□ 0.5
UBE2V1-222	ENST00000557021	BLM	P54132	1417 aa	Predicted RBP	18.16	■□□□□ 0.5
UBE2V1-222	ENST00000557021	CDK12	Q9NYV4	1490 aa	Predicted RBP	18.16	■□□□□ 0.5
UBE2V1-222	ENST00000557021	FAM9B	Q8IZU0	186 aa		18.15	■□□□□ 0.5
UBE2V1-222	ENST00000557021	RGPD2	P0DJD1	1756 aa		18.15	■□□□□ 0.5
UBE2V1-222	ENST00000557021	TRPC5	Q9UL62	973 aa	Predicted RBP	18.15	■□□□□ 0.5
UBE2V1-222	ENST00000557021	GJD4	Q96KN9	370 aa	Predicted RBP	18.14	■□□□□ 0.49
UBE2V1-222	ENST00000557021	VPS72	Q15906	364 aa		18.14	■□□□□ 0.49
UBE2V1-222	ENST00000557021	ZNF772	Q68DY9	489 aa	Predicted RBP	18.14	■□□□□ 0.49
UBE2V1-222	ENST00000557021	SPATA31A1	Q5TZJ5	1347 aa		18.13	■□□□□ 0.49
UBE2V1-222	ENST00000557021	SPATA31A5	Q5VU36	1347 aa		18.13	■□□□□ 0.49
UBE2V1-222	ENST00000557021	SPATA31A7	Q8IWB4	1347 aa		18.13	■□□□□ 0.49
UBE2V1-222	ENST00000557021	FAM182B	Q5T319	152 aa		18.13	■□□□□ 0.49
UBE2V1-222	ENST00000557021	COL3A1	P02461	1466 aa	Predicted RBP	18.13	■□□□□ 0.49
UBE2V1-222	ENST00000557021	CCDC146	Q8IYE0	955 aa		18.12	■□□□□ 0.49
UBE2V1-222	ENST00000557021	CRB1	P82279	1406 aa		18.12	■□□□□ 0.49
UBE2V1-222	ENST00000557021	ADAMTS8	Q9UP79	889 aa		18.12	■□□□□ 0.49
UBE2V1-222	ENST00000557021	KIF24	Q5T7B8	1368 aa		18.12	■□□□□ 0.49
UBE2V1-222	ENST00000557021	TCP11L2	Q8N4U5	519 aa		18.11	■□□□□ 0.49
UBE2V1-222	ENST00000557021	CARD10	Q9BWT7	1032 aa		18.11	■□□□□ 0.49
UBE2V1-222	ENST00000557021	NRAP	Q86VF7	1730 aa		18.11	■□□□□ 0.49
UBE2V1-222	ENST00000557021	WDR43	Q15061	677 aa	Known RBP eCLIP	18.1	■□□□□ 0.49
UBE2V1-222	ENST00000557021	NUDC	Q9Y266	331 aa		18.1	■□□□□ 0.49
UBE2V1-222	ENST00000557021	IGSF1	Q8N6C5	1336 aa		18.09	■□□□□ 0.49
UBE2V1-222	ENST00000557021	ATRN	O75882	1429 aa		18.09	■□□□□ 0.49
UBE2V1-222	ENST00000557021	RXRB	P28702	533 aa		18.09	■□□□□ 0.49
UBE2V1-222	ENST00000557021	NWD2	Q9ULI1	1742 aa		18.08	■□□□□ 0.48
UBE2V1-222	ENST00000557021	PRKAR2B	P31323	418 aa		18.07	■□□□□ 0.48
UBE2V1-222	ENST00000557021	PNISR	Q8TF01	805 aa	Known RBP	18.07	■□□□□ 0.48
UBE2V1-222	ENST00000557021	RAPGEF4	Q8WZA2	1011 aa		18.07	■□□□□ 0.48
UBE2V1-222	ENST00000557021	PHACTR3	Q96KR7	559 aa		18.07	■□□□□ 0.48
UBE2V1-222	ENST00000557021	DDX54	Q8TDD1	881 aa	Known RBP	18.06	■□□□□ 0.48
UBE2V1-222	ENST00000557021	MEGF6	O75095	1541 aa		18.06	■□□□□ 0.48
UBE2V1-222	ENST00000557021	IL2RB	P14784	551 aa		18.06	■□□□□ 0.48
UBE2V1-222	ENST00000557021	RBM6	P78332	1123 aa	Known RBP	18.06	■□□□□ 0.48
UBE2V1-222	ENST00000557021	SEPT12	Q8IYM1	358 aa		18.06	■□□□□ 0.48
UBE2V1-222	ENST00000557021	SALL2	Q9Y467	1007 aa	Predicted RBP	18.06	■□□□□ 0.48
UBE2V1-222	ENST00000557021	GLI3	P10071	1580 aa		18.06	■□□□□ 0.48
UBE2V1-222	ENST00000557021	NEUROD2	Q15784	382 aa		18.05	■□□□□ 0.48
UBE2V1-222	ENST00000557021	RSPH6A	Q9H0K4	717 aa		18.04	■□□□□ 0.48
UBE2V1-222	ENST00000557021	RRP7A	Q9Y3A4	280 aa	Known RBP	18.04	■□□□□ 0.48
UBE2V1-222	ENST00000557021	ABCC6	O95255	1503 aa		18.04	■□□□□ 0.48
UBE2V1-222	ENST00000557021	TAT	P17735	454 aa	Predicted RBP	18.03	■□□□□ 0.48
UBE2V1-222	ENST00000557021	DDB1	Q16531	1140 aa		18.02	■□□□□ 0.47

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms