RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 EMILIN1Q9Y6C2 1016 aa14.19□□□□□ -0.14
SRP54-213ENST00000556994 PIK3C2BO00750 1634 aa14.19□□□□□ -0.14
SRP54-213ENST00000556994 BRPF1P55201 1214 aaPredicted RBP14.18□□□□□ -0.14
SRP54-213ENST00000556994 WAPLQ7Z5K2 1190 aa14.18□□□□□ -0.14
SRP54-213ENST00000556994 C8orf58Q8NAV2 365 aa14.18□□□□□ -0.14
SRP54-213ENST00000556994 MYO5BQ9ULV0 1848 aa14.18□□□□□ -0.14
SRP54-213ENST00000556994 YTHDC2Q9H6S0 1430 aaKnown RBP14.18□□□□□ -0.14
SRP54-213ENST00000556994 CFAP74Q9C0B2 1584 aa14.17□□□□□ -0.14
SRP54-213ENST00000556994 MED14O60244 1454 aa14.17□□□□□ -0.14
SRP54-213ENST00000556994 ESPNB1AK53 854 aa14.17□□□□□ -0.14
SRP54-213ENST00000556994 FAM135BQ49AJ0 1406 aa14.17□□□□□ -0.14
SRP54-213ENST00000556994 ANKRD26Q9UPS8 1709 aa14.17□□□□□ -0.14
SRP54-213ENST00000556994 FAM83GA6ND36 823 aa14.16□□□□□ -0.14
SRP54-213ENST00000556994 GSPT1P15170 499 aaKnown RBP14.16□□□□□ -0.14
SRP54-213ENST00000556994 TWISTNBQ3B726 338 aaPredicted RBP14.16□□□□□ -0.14
SRP54-213ENST00000556994 FBXO31Q5XUX0 539 aaPredicted RBP14.16□□□□□ -0.14
SRP54-213ENST00000556994 C16orf71Q8IYS4 520 aaPredicted RBP14.16□□□□□ -0.14
SRP54-213ENST00000556994 SLC52A1Q9NWF4 448 aa14.16□□□□□ -0.14
SRP54-213ENST00000556994 ZRANB1Q9UGI0 708 aa14.16□□□□□ -0.14
SRP54-213ENST00000556994 GNAI1P63096 354 aa14.16□□□□□ -0.14
SRP54-213ENST00000556994 DCTN1Q14203 1278 aa14.16□□□□□ -0.14
SRP54-213ENST00000556994 ZNF428Q96B54 188 aa14.16□□□□□ -0.14
SRP54-213ENST00000556994 ARHGAP45Q92619 1136 aa14.15□□□□□ -0.14
SRP54-213ENST00000556994 TRIM44Q96DX7 344 aaPredicted RBP14.15□□□□□ -0.14
SRP54-213ENST00000556994 AK9Q5TCS8 1911 aa14.15□□□□□ -0.14
SRP54-213ENST00000556994 SKOR2Q2VWA4 1001 aaPredicted RBP14.15□□□□□ -0.14
SRP54-213ENST00000556994 CDC45O75419 566 aa14.14□□□□□ -0.15
SRP54-213ENST00000556994 IFT57Q9NWB7 429 aa14.14□□□□□ -0.15
SRP54-213ENST00000556994 ABCC4O15439 1325 aa14.14□□□□□ -0.15
SRP54-213ENST00000556994 PLEKHM2Q8IWE5 1019 aa14.14□□□□□ -0.15
SRP54-213ENST00000556994 CHMP4BQ9H444 224 aaKnown RBP14.14□□□□□ -0.15
SRP54-213ENST00000556994 ISY1Q9ULR0 285 aaKnown RBP14.14□□□□□ -0.15
SRP54-213ENST00000556994 ZFYVE9O95405 1425 aa14.14□□□□□ -0.15
SRP54-213ENST00000556994 PTCH1Q13635 1447 aa14.14□□□□□ -0.15
SRP54-213ENST00000556994 APBB1O00213 710 aa14.13□□□□□ -0.15
SRP54-213ENST00000556994 NME9Q86XW9 330 aa14.13□□□□□ -0.15
SRP54-213ENST00000556994 PIK3R4Q99570 1358 aa14.13□□□□□ -0.15
SRP54-213ENST00000556994 ZNF853P0CG23 659 aa14.13□□□□□ -0.15
SRP54-213ENST00000556994 STAG3Q9UJ98 1225 aa14.13□□□□□ -0.15
SRP54-213ENST00000556994 DDX49Q9Y6V7 483 aaKnown RBP14.13□□□□□ -0.15
SRP54-213ENST00000556994 MAP2P11137 1827 aaKnown RBP14.12□□□□□ -0.15
SRP54-213ENST00000556994 IL13P35225 146 aa14.12□□□□□ -0.15
SRP54-213ENST00000556994 CALD1Q05682 793 aaKnown RBP14.12□□□□□ -0.15
SRP54-213ENST00000556994 RRS1Q15050 365 aaKnown RBP14.12□□□□□ -0.15
SRP54-213ENST00000556994 OTUD7AQ8TE49 926 aaPredicted RBP14.12□□□□□ -0.15
SRP54-213ENST00000556994 BAG4O95429 457 aaKnown RBP14.12□□□□□ -0.15
SRP54-213ENST00000556994 KIF20BQ96Q89 1820 aa14.11□□□□□ -0.15
SRP54-213ENST00000556994 ARHGEF40Q8TER5 1519 aa14.11□□□□□ -0.15
SRP54-213ENST00000556994 KRT24Q2M2I5 525 aa14.11□□□□□ -0.15
SRP54-213ENST00000556994 CFAP44Q96MT7 982 aa14.11□□□□□ -0.15
SRP54-213ENST00000556994 GOLGA6L22H0YM25 854 aa14.1□□□□□ -0.15
SRP54-213ENST00000556994 NCLP19338 710 aaKnown RBP14.1□□□□□ -0.15
SRP54-213ENST00000556994 MCTP1Q6DN14 999 aa14.1□□□□□ -0.15
SRP54-213ENST00000556994 NCKAP5LQ9HCH0 1330 aa14.1□□□□□ -0.15
SRP54-213ENST00000556994 SMARCA5O60264 1052 aaPredicted RBP14.1□□□□□ -0.15
SRP54-213ENST00000556994 PKP1Q13835 747 aa14.1□□□□□ -0.15
SRP54-213ENST00000556994 API5Q9BZZ5 524 aaKnown RBP14.1□□□□□ -0.15
SRP54-213ENST00000556994 ARHGAP31Q2M1Z3 1444 aa14.1□□□□□ -0.15
SRP54-213ENST00000556994 CLTCQ00610 1675 aaKnown RBP14.1□□□□□ -0.15
SRP54-213ENST00000556994 CDC42BPGQ6DT37 1551 aa14.09□□□□□ -0.15
SRP54-213ENST00000556994 TTC22Q5TAA0 569 aa14.09□□□□□ -0.15
SRP54-213ENST00000556994 DCTPP1Q9H773 170 aa14.09□□□□□ -0.15
SRP54-213ENST00000556994 YEATS2Q9ULM3 1422 aa14.09□□□□□ -0.15
SRP54-213ENST00000556994 TMEM131LA2VDJ0 1609 aa14.09□□□□□ -0.15
SRP54-213ENST00000556994 NASPP49321 788 aaPredicted RBP14.09□□□□□ -0.15
SRP54-213ENST00000556994 DIP2CQ9Y2E4 1556 aa14.09□□□□□ -0.15
SRP54-213ENST00000556994 ALKQ9UM73 1620 aa14.08□□□□□ -0.16
SRP54-213ENST00000556994 PTMSP20962 102 aa14.08□□□□□ -0.16
SRP54-213ENST00000556994 USP26Q9BXU7 913 aa14.08□□□□□ -0.16
SRP54-213ENST00000556994 KNDC1Q76NI1 1749 aa14.07□□□□□ -0.16
SRP54-213ENST00000556994 RABEP1Q15276 862 aa14.07□□□□□ -0.16
SRP54-213ENST00000556994 KLHL40Q2TBA0 621 aa14.07□□□□□ -0.16
SRP54-213ENST00000556994 CAVIN1Q6NZI2 390 aaKnown RBP14.07□□□□□ -0.16
SRP54-213ENST00000556994 SDSP20132 328 aa14.06□□□□□ -0.16
SRP54-213ENST00000556994 ZGPATQ8N5A5 531 aaKnown RBP14.06□□□□□ -0.16
SRP54-213ENST00000556994 CHAMP1Q96JM3 812 aa14.06□□□□□ -0.16
SRP54-213ENST00000556994 RIMS2Q9UQ26 1411 aa14.06□□□□□ -0.16
SRP54-213ENST00000556994 DLG5Q8TDM6 1919 aa14.06□□□□□ -0.16
SRP54-213ENST00000556994 HSP90AA2PQ14568 343 aaPredicted RBP14.06□□□□□ -0.16
SRP54-213ENST00000556994 CLEC17AQ6ZS10 378 aa14.06□□□□□ -0.16
SRP54-213ENST00000556994 AEBP1Q8IUX7 1158 aa14.06□□□□□ -0.16
SRP54-213ENST00000556994 PREX1Q8TCU6 1659 aa14.05□□□□□ -0.16
SRP54-213ENST00000556994 LMOD3Q0VAK6 560 aa14.04□□□□□ -0.16
SRP54-213ENST00000556994 CCDC173Q0VFZ6 552 aa14.04□□□□□ -0.16
SRP54-213ENST00000556994 INTS3Q68E01 1043 aaKnown RBP14.04□□□□□ -0.16
SRP54-213ENST00000556994 ANKRD44Q8N8A2 993 aa14.04□□□□□ -0.16
SRP54-213ENST00000556994 COG3Q96JB2 828 aa14.04□□□□□ -0.16
SRP54-213ENST00000556994 CEP85Q6P2H3 762 aa14.04□□□□□ -0.16
SRP54-213ENST00000556994 MCM10Q7L590 875 aa14.04□□□□□ -0.16
SRP54-213ENST00000556994 LMBRD1Q9NUN5 540 aa14.04□□□□□ -0.16
SRP54-213ENST00000556994 NUCB2P80303 420 aa14.03□□□□□ -0.16
SRP54-213ENST00000556994 FOXD4L5Q5VV16 416 aaPredicted RBP14.03□□□□□ -0.16
SRP54-213ENST00000556994 FOXD4L4Q8WXT5 416 aaPredicted RBP14.03□□□□□ -0.16
SRP54-213ENST00000556994 PPP1R9BQ96SB3 815 aa14.03□□□□□ -0.16
SRP54-213ENST00000556994 MEIS3Q99687 375 aa14.03□□□□□ -0.16
SRP54-213ENST00000556994 PRPF40AO75400 957 aaKnown RBP14.03□□□□□ -0.16
SRP54-213ENST00000556994 ZSCAN23Q3MJ62 389 aa14.03□□□□□ -0.16
SRP54-213ENST00000556994 ANP32BQ92688 251 aaKnown RBP14.03□□□□□ -0.16
SRP54-213ENST00000556994 RBM27Q9P2N5 1060 aaKnown RBP14.03□□□□□ -0.16
SRP54-213ENST00000556994 WASLO00401 505 aaPredicted RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms