RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 CRB1P82279 1406 aa25.03■■□□□ 1.6
XRCC3-217ENST00000556980 AXIN2Q9Y2T1 843 aa25.02■■□□□ 1.6
XRCC3-217ENST00000556980 OVOS2A0A0J9YW53 1432 aa25.02■■□□□ 1.6
XRCC3-217ENST00000556980 OVOS2Q6IE36 1432 aa25.02■■□□□ 1.6
XRCC3-217ENST00000556980 HSPA5P11021 654 aaKnown RBP25.01■■□□□ 1.59
XRCC3-217ENST00000556980 EP400Q96L91 3159 aa25.01■■□□□ 1.59
XRCC3-217ENST00000556980 TOM1L2Q6ZVM7 507 aa25■■□□□ 1.59
XRCC3-217ENST00000556980 THRAP3Q9Y2W1 955 aaKnown RBP25■■□□□ 1.59
XRCC3-217ENST00000556980 BLMP54132 1417 aaPredicted RBP25■■□□□ 1.59
XRCC3-217ENST00000556980 ABCC6O95255 1503 aa24.99■■□□□ 1.59
XRCC3-217ENST00000556980 CSB-PGBD3P0DP91 1061 aa24.99■■□□□ 1.59
XRCC3-217ENST00000556980 COL18A1P39060 1754 aa24.99■■□□□ 1.59
XRCC3-217ENST00000556980 WDR17Q8IZU2 1322 aa24.99■■□□□ 1.59
XRCC3-217ENST00000556980 COG3Q96JB2 828 aa24.99■■□□□ 1.59
XRCC3-217ENST00000556980 SF3B2Q13435 895 aaKnown RBP24.96■■□□□ 1.59
XRCC3-217ENST00000556980 POLR3GLQ9BT43 218 aa24.96■■□□□ 1.59
XRCC3-217ENST00000556980 FAM182BQ5T319 152 aa24.95■■□□□ 1.58
XRCC3-217ENST00000556980 PDE3BQ13370 1112 aa24.93■■□□□ 1.58
XRCC3-217ENST00000556980 MYOM1P52179 1685 aa24.93■■□□□ 1.58
XRCC3-217ENST00000556980 GGNBP2Q9H3C7 697 aa24.92■■□□□ 1.58
XRCC3-217ENST00000556980 FYB1O15117 783 aa24.91■■□□□ 1.58
XRCC3-217ENST00000556980 NSD3Q9BZ95 1437 aa24.9■■□□□ 1.58
XRCC3-217ENST00000556980 CARD10Q9BWT7 1032 aa24.9■■□□□ 1.58
XRCC3-217ENST00000556980 CARD14Q9BXL6 1004 aa24.89■■□□□ 1.58
XRCC3-217ENST00000556980 ERBB3P21860 1342 aa24.88■■□□□ 1.57
XRCC3-217ENST00000556980 LTN1O94822 1766 aa24.88■■□□□ 1.57
XRCC3-217ENST00000556980 FAM196AQ6ZSG2 479 aa24.88■■□□□ 1.57
XRCC3-217ENST00000556980 ANKRD24Q8TF21 1146 aa24.87■■□□□ 1.57
XRCC3-217ENST00000556980 CDCA7Q9BWT1 371 aaPredicted RBP24.87■■□□□ 1.57
XRCC3-217ENST00000556980 NLRP2Q9NX02 1062 aa24.87■■□□□ 1.57
XRCC3-217ENST00000556980 CCDC7Q96M83 1385 aa24.87■■□□□ 1.57
XRCC3-217ENST00000556980 MAP3K19Q56UN5 1328 aa24.86■■□□□ 1.57
XRCC3-217ENST00000556980 RGPD5Q99666 1765 aa24.86■■□□□ 1.57
XRCC3-217ENST00000556980 DEFB132Q7Z7B7 95 aa24.86■■□□□ 1.57
XRCC3-217ENST00000556980 IP6K1Q92551 441 aa24.86■■□□□ 1.57
XRCC3-217ENST00000556980 PARP4Q9UKK3 1724 aaKnown RBP24.86■■□□□ 1.57
XRCC3-217ENST00000556980 AMPHP49418 695 aa24.85■■□□□ 1.57
XRCC3-217ENST00000556980 DDB1Q16531 1140 aa24.85■■□□□ 1.57
XRCC3-217ENST00000556980 FBLN1P23142 703 aa24.83■■□□□ 1.57
XRCC3-217ENST00000556980 BAG6P46379 1132 aa24.83■■□□□ 1.57
XRCC3-217ENST00000556980 LRRC37A3O60309 1634 aa24.83■■□□□ 1.56
XRCC3-217ENST00000556980 KIF20BQ96Q89 1820 aa24.82■■□□□ 1.56
XRCC3-217ENST00000556980 HOXC9P31274 260 aa24.82■■□□□ 1.56
XRCC3-217ENST00000556980 LTV1Q96GA3 475 aaPredicted RBP24.82■■□□□ 1.56
XRCC3-217ENST00000556980 CGNL1Q0VF96 1302 aa24.82■■□□□ 1.56
XRCC3-217ENST00000556980 RTL1A6NKG5 1358 aa24.81■■□□□ 1.56
XRCC3-217ENST00000556980 DISP2A7MBM2 1401 aa24.81■■□□□ 1.56
XRCC3-217ENST00000556980 TRIM37O94972 964 aa24.81■■□□□ 1.56
XRCC3-217ENST00000556980 RRS1Q15050 365 aaKnown RBP24.8■■□□□ 1.56
XRCC3-217ENST00000556980 RGPD1P0DJD0 1748 aa24.8■■□□□ 1.56
XRCC3-217ENST00000556980 OVOS2A0A0G2JMS6 1433 aa24.79■■□□□ 1.56
XRCC3-217ENST00000556980 C11orf95C9JLR9 678 aaPredicted RBP24.79■■□□□ 1.56
XRCC3-217ENST00000556980 WNK3Q9BYP7 1800 aa24.79■■□□□ 1.56
XRCC3-217ENST00000556980 EXOC5O00471 708 aa24.76■■□□□ 1.55
XRCC3-217ENST00000556980 IL2RBP14784 551 aa24.76■■□□□ 1.55
XRCC3-217ENST00000556980 PANK3Q9H999 370 aa24.76■■□□□ 1.55
XRCC3-217ENST00000556980 EN1Q05925 392 aaPredicted RBP24.74■■□□□ 1.55
XRCC3-217ENST00000556980 TNS2Q63HR2 1409 aa24.74■■□□□ 1.55
XRCC3-217ENST00000556980 TNS1Q9HBL0 1735 aaKnown RBP24.74■■□□□ 1.55
XRCC3-217ENST00000556980 SMG6Q86US8 1419 aaKnown RBP24.73■■□□□ 1.55
XRCC3-217ENST00000556980 APBA3O96018 575 aa24.73■■□□□ 1.55
XRCC3-217ENST00000556980 MARCH10Q8NA82 808 aaPredicted RBP24.73■■□□□ 1.55
XRCC3-217ENST00000556980 FAM208AQ9UK61 1670 aaKnown RBP24.72■■□□□ 1.55
XRCC3-217ENST00000556980 FLT4P35916 1363 aa24.72■■□□□ 1.55
XRCC3-217ENST00000556980 KIF24Q5T7B8 1368 aa24.72■■□□□ 1.55
XRCC3-217ENST00000556980 KIF7Q2M1P5 1343 aa24.72■■□□□ 1.55
XRCC3-217ENST00000556980 PEAK1Q9H792 1746 aa24.7■■□□□ 1.54
XRCC3-217ENST00000556980 INSRP06213 1382 aa24.69■■□□□ 1.54
XRCC3-217ENST00000556980 HSP90AB2PQ58FF8 381 aa24.69■■□□□ 1.54
XRCC3-217ENST00000556980 EMILIN1Q9Y6C2 1016 aa24.69■■□□□ 1.54
XRCC3-217ENST00000556980 PPM1GO15355 546 aaPredicted RBP24.68■■□□□ 1.54
XRCC3-217ENST00000556980 BCL9O00512 1426 aa24.68■■□□□ 1.54
XRCC3-217ENST00000556980 EZH2Q15910 746 aaKnown RBP24.67■■□□□ 1.54
XRCC3-217ENST00000556980 NSD2O96028 1365 aa24.67■■□□□ 1.54
XRCC3-217ENST00000556980 PARD3Q8TEW0 1356 aa24.67■■□□□ 1.54
XRCC3-217ENST00000556980 TNNT2P45379 298 aaPredicted RBP24.66■■□□□ 1.54
XRCC3-217ENST00000556980 NBPF6Q5VWK0 638 aa24.65■■□□□ 1.54
XRCC3-217ENST00000556980 NBPF4Q96M43 638 aa24.65■■□□□ 1.54
XRCC3-217ENST00000556980 CAMKK2Q96RR4 588 aa24.65■■□□□ 1.54
XRCC3-217ENST00000556980 KNSTRNQ9Y448 316 aa24.65■■□□□ 1.54
XRCC3-217ENST00000556980 BCL11BQ9C0K0 894 aaPredicted RBP24.64■■□□□ 1.54
XRCC3-217ENST00000556980 USHBP1Q8N6Y0 703 aa24.63■■□□□ 1.53
XRCC3-217ENST00000556980 ANKRD26Q9UPS8 1709 aa24.62■■□□□ 1.53
XRCC3-217ENST00000556980 POLKQ9UBT6 870 aa24.62■■□□□ 1.53
XRCC3-217ENST00000556980 WASHC2AQ641Q2 1341 aa24.61■■□□□ 1.53
XRCC3-217ENST00000556980 MORC1Q86VD1 984 aa24.6■■□□□ 1.53
XRCC3-217ENST00000556980 RAPGEF4Q8WZA2 1011 aa24.6■■□□□ 1.53
XRCC3-217ENST00000556980 MEGF6O75095 1541 aa24.6■■□□□ 1.53
XRCC3-217ENST00000556980 PTF1AQ7RTS3 328 aa24.59■■□□□ 1.53
XRCC3-217ENST00000556980 DDX54Q8TDD1 881 aaKnown RBP24.59■■□□□ 1.53
XRCC3-217ENST00000556980 ZCRB1Q8TBF4 217 aaKnown RBP24.57■■□□□ 1.52
XRCC3-217ENST00000556980 RGPD2P0DJD1 1756 aa24.57■■□□□ 1.52
XRCC3-217ENST00000556980 PSDA5PKW4 1024 aaPredicted RBP24.56■■□□□ 1.52
XRCC3-217ENST00000556980 ACSBG1Q96GR2 724 aa24.56■■□□□ 1.52
XRCC3-217ENST00000556980 SBF2Q86WG5 1849 aa24.56■■□□□ 1.52
XRCC3-217ENST00000556980 PLSCR1O15162 318 aa24.55■■□□□ 1.52
XRCC3-217ENST00000556980 TATP17735 454 aaPredicted RBP24.55■■□□□ 1.52
XRCC3-217ENST00000556980 KCNQ2O43526 872 aa24.54■■□□□ 1.52
XRCC3-217ENST00000556980 AMER1Q5JTC6 1135 aaPredicted RBP24.54■■□□□ 1.52
XRCC3-217ENST00000556980 R3HDM1Q15032 1099 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms