RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 MAP3K19Q56UN5 1328 aa22.29■■□□□ 1.16
PCNX4-213ENST00000556907 CAMTA1Q9Y6Y1 1673 aa22.28■■□□□ 1.16
PCNX4-213ENST00000556907 ZBTB7CA1YPR0 619 aa22.28■■□□□ 1.16
PCNX4-213ENST00000556907 VPS72Q15906 364 aa22.28■■□□□ 1.16
PCNX4-213ENST00000556907 ATRNO75882 1429 aa22.28■■□□□ 1.16
PCNX4-213ENST00000556907 BLMP54132 1417 aaPredicted RBP22.28■■□□□ 1.16
PCNX4-213ENST00000556907 ANP32CO43423 234 aa22.27■■□□□ 1.16
PCNX4-213ENST00000556907 AMPHP49418 695 aa22.27■■□□□ 1.16
PCNX4-213ENST00000556907 NRAPQ86VF7 1730 aa22.26■■□□□ 1.15
PCNX4-213ENST00000556907 RBM6P78332 1123 aaKnown RBP22.25■■□□□ 1.15
PCNX4-213ENST00000556907 CC2D1BQ5T0F9 858 aaKnown RBP22.25■■□□□ 1.15
PCNX4-213ENST00000556907 MIER1Q8N108 512 aa22.25■■□□□ 1.15
PCNX4-213ENST00000556907 AXIN2Q9Y2T1 843 aa22.25■■□□□ 1.15
PCNX4-213ENST00000556907 COL5A2P05997 1499 aaPredicted RBP22.25■■□□□ 1.15
PCNX4-213ENST00000556907 PARD3Q8TEW0 1356 aa22.25■■□□□ 1.15
PCNX4-213ENST00000556907 RXRBP28702 533 aa22.24■■□□□ 1.15
PCNX4-213ENST00000556907 HOXC9P31274 260 aa22.24■■□□□ 1.15
PCNX4-213ENST00000556907 RRS1Q15050 365 aaKnown RBP22.24■■□□□ 1.15
PCNX4-213ENST00000556907 POTEAQ6S8J7 498 aa22.24■■□□□ 1.15
PCNX4-213ENST00000556907 GJD4Q96KN9 370 aaPredicted RBP22.24■■□□□ 1.15
PCNX4-213ENST00000556907 MAP2P11137 1827 aaKnown RBP22.24■■□□□ 1.15
PCNX4-213ENST00000556907 FLT4P35916 1363 aa22.24■■□□□ 1.15
PCNX4-213ENST00000556907 STRN4Q9NRL3 753 aa22.23■■□□□ 1.15
PCNX4-213ENST00000556907 POLKQ9UBT6 870 aa22.23■■□□□ 1.15
PCNX4-213ENST00000556907 FBLN1P23142 703 aa22.22■■□□□ 1.15
PCNX4-213ENST00000556907 WDR17Q8IZU2 1322 aa22.22■■□□□ 1.15
PCNX4-213ENST00000556907 TNNT2P45379 298 aaPredicted RBP22.21■■□□□ 1.15
PCNX4-213ENST00000556907 PRKRIP1Q9H875 184 aaPredicted RBP22.21■■□□□ 1.15
PCNX4-213ENST00000556907 INSRP06213 1382 aa22.21■■□□□ 1.15
PCNX4-213ENST00000556907 THRAP3Q9Y2W1 955 aaKnown RBP22.2■■□□□ 1.14
PCNX4-213ENST00000556907 CCDC9Q9Y3X0 531 aaKnown RBP22.2■■□□□ 1.14
PCNX4-213ENST00000556907 ERBB3P21860 1342 aa22.2■■□□□ 1.14
PCNX4-213ENST00000556907 SPATA31A5Q5VU36 1347 aa22.2■■□□□ 1.14
PCNX4-213ENST00000556907 SPATA31A7Q8IWB4 1347 aa22.2■■□□□ 1.14
PCNX4-213ENST00000556907 RGPD5Q99666 1765 aa22.2■■□□□ 1.14
PCNX4-213ENST00000556907 CSB-PGBD3P0DP91 1061 aa22.19■■□□□ 1.14
PCNX4-213ENST00000556907 CRB1P82279 1406 aa22.19■■□□□ 1.14
PCNX4-213ENST00000556907 SMG6Q86US8 1419 aaKnown RBP22.19■■□□□ 1.14
PCNX4-213ENST00000556907 CDK12Q9NYV4 1490 aaPredicted RBP22.18■■□□□ 1.14
PCNX4-213ENST00000556907 LARP1Q6PKG0 1096 aaKnown RBP22.18■■□□□ 1.14
PCNX4-213ENST00000556907 ANKRD24Q8TF21 1146 aa22.18■■□□□ 1.14
PCNX4-213ENST00000556907 EMILIN1Q9Y6C2 1016 aa22.18■■□□□ 1.14
PCNX4-213ENST00000556907 SPATA31A1Q5TZJ5 1347 aa22.17■■□□□ 1.14
PCNX4-213ENST00000556907 TOM1L2Q6ZVM7 507 aa22.17■■□□□ 1.14
PCNX4-213ENST00000556907 CARD10Q9BWT7 1032 aa22.17■■□□□ 1.14
PCNX4-213ENST00000556907 PPM1GO15355 546 aaPredicted RBP22.16■■□□□ 1.14
PCNX4-213ENST00000556907 ONECUT3O60422 494 aaPredicted RBP22.16■■□□□ 1.14
PCNX4-213ENST00000556907 RALBP1Q15311 655 aa22.16■■□□□ 1.14
PCNX4-213ENST00000556907 FAM208AQ9UK61 1670 aaKnown RBP22.16■■□□□ 1.14
PCNX4-213ENST00000556907 HSP90AB2PQ58FF8 381 aa22.15■■□□□ 1.14
PCNX4-213ENST00000556907 BARGINQ6ZT62 677 aa22.15■■□□□ 1.14
PCNX4-213ENST00000556907 TCP11L2Q8N4U5 519 aa22.15■■□□□ 1.14
PCNX4-213ENST00000556907 PEAK1Q9H792 1746 aa22.14■■□□□ 1.14
PCNX4-213ENST00000556907 CCER2I3L3R5 266 aa22.14■■□□□ 1.13
PCNX4-213ENST00000556907 GLI3P10071 1580 aa22.13■■□□□ 1.13
PCNX4-213ENST00000556907 MTHFSP49914 203 aa22.12■■□□□ 1.13
PCNX4-213ENST00000556907 CDCA7Q9BWT1 371 aaPredicted RBP22.12■■□□□ 1.13
PCNX4-213ENST00000556907 CNGB1Q14028 1251 aaPredicted RBP22.11■■□□□ 1.13
PCNX4-213ENST00000556907 LTV1Q96GA3 475 aaPredicted RBP22.11■■□□□ 1.13
PCNX4-213ENST00000556907 NLRP2Q9NX02 1062 aa22.11■■□□□ 1.13
PCNX4-213ENST00000556907 MYBBP1AQ9BQG0 1328 aaKnown RBP22.1■■□□□ 1.13
PCNX4-213ENST00000556907 PPP2R1AP30153 589 aa22.09■■□□□ 1.13
PCNX4-213ENST00000556907 USP35Q9P2H5 1018 aa22.09■■□□□ 1.13
PCNX4-213ENST00000556907 FAM98CQ17RN3 349 aaKnown RBP22.08■■□□□ 1.13
PCNX4-213ENST00000556907 CFAP53Q96M91 514 aa22.07■■□□□ 1.12
PCNX4-213ENST00000556907 EIF4A2Q14240 407 aaKnown RBP22.06■■□□□ 1.12
PCNX4-213ENST00000556907 SEPT12Q8IYM1 358 aa22.05■■□□□ 1.12
PCNX4-213ENST00000556907 NBPF6Q5VWK0 638 aa22.04■■□□□ 1.12
PCNX4-213ENST00000556907 NBPF4Q96M43 638 aa22.04■■□□□ 1.12
PCNX4-213ENST00000556907 RGS12O14924 1447 aa22.04■■□□□ 1.12
PCNX4-213ENST00000556907 DIAPH1O60610 1272 aaKnown RBP22.03■■□□□ 1.12
PCNX4-213ENST00000556907 THSD7AQ9UPZ6 1657 aa22.03■■□□□ 1.12
PCNX4-213ENST00000556907 A0A0G2JS52 829 aa22.02■■□□□ 1.12
PCNX4-213ENST00000556907 IL2RBP14784 551 aa22.02■■□□□ 1.12
PCNX4-213ENST00000556907 IL13P35225 146 aa22.02■■□□□ 1.12
PCNX4-213ENST00000556907 MYT1Q01538 1121 aa22.02■■□□□ 1.12
PCNX4-213ENST00000556907 NCAPD2Q15021 1401 aa22.02■■□□□ 1.12
PCNX4-213ENST00000556907 EYA1Q99502 592 aa22.01■■□□□ 1.11
PCNX4-213ENST00000556907 PLEKHG2Q9H7P9 1386 aa22■■□□□ 1.11
PCNX4-213ENST00000556907 DISP2A7MBM2 1401 aa22■■□□□ 1.11
PCNX4-213ENST00000556907 IGSF1Q8N6C5 1336 aa22■■□□□ 1.11
PCNX4-213ENST00000556907 PARP4Q9UKK3 1724 aaKnown RBP22■■□□□ 1.11
PCNX4-213ENST00000556907 RGPD2P0DJD1 1756 aa21.99■■□□□ 1.11
PCNX4-213ENST00000556907 WNK3Q9BYP7 1800 aa21.99■■□□□ 1.11
PCNX4-213ENST00000556907 RAPGEF4Q8WZA2 1011 aa21.99■■□□□ 1.11
PCNX4-213ENST00000556907 NUDCQ9Y266 331 aa21.99■■□□□ 1.11
PCNX4-213ENST00000556907 EXOC5O00471 708 aa21.98■■□□□ 1.11
PCNX4-213ENST00000556907 DDB1Q16531 1140 aa21.98■■□□□ 1.11
PCNX4-213ENST00000556907 ILDR2Q71H61 639 aa21.98■■□□□ 1.11
PCNX4-213ENST00000556907 PDE3BQ13370 1112 aa21.97■■□□□ 1.11
PCNX4-213ENST00000556907 KRT27Q7Z3Y8 459 aa21.97■■□□□ 1.11
PCNX4-213ENST00000556907 COL3A1P02461 1466 aaPredicted RBP21.96■■□□□ 1.11
PCNX4-213ENST00000556907 TATP17735 454 aaPredicted RBP21.96■■□□□ 1.11
PCNX4-213ENST00000556907 USHBP1Q8N6Y0 703 aa21.94■■□□□ 1.1
PCNX4-213ENST00000556907 MRS2Q9HD23 443 aa21.94■■□□□ 1.1
PCNX4-213ENST00000556907 KDRP35968 1356 aa21.94■■□□□ 1.1
PCNX4-213ENST00000556907 RGPD1P0DJD0 1748 aa21.94■■□□□ 1.1
PCNX4-213ENST00000556907 BRWD3Q6RI45 1802 aa21.94■■□□□ 1.1
PCNX4-213ENST00000556907 CCDC184Q52MB2 194 aa21.93■■□□□ 1.1
PCNX4-213ENST00000556907 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms