RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 A0A0G2JS52 829 aa14.53□□□□□ -0.08
SHMT2-224ENST00000556737 MYT1Q01538 1121 aa14.53□□□□□ -0.08
SHMT2-224ENST00000556737 PEAK1Q9H792 1746 aa14.52□□□□□ -0.08
SHMT2-224ENST00000556737 SLC24A1O60721 1099 aa14.52□□□□□ -0.09
SHMT2-224ENST00000556737 BARGINQ6ZT62 677 aa14.52□□□□□ -0.09
SHMT2-224ENST00000556737 KCNH5Q8NCM2 988 aa14.52□□□□□ -0.09
SHMT2-224ENST00000556737 CCER1Q8TC90 406 aaPredicted RBP14.52□□□□□ -0.09
SHMT2-224ENST00000556737 TERF2IPQ9NYB0 399 aa14.52□□□□□ -0.09
SHMT2-224ENST00000556737 AXIN2Q9Y2T1 843 aa14.52□□□□□ -0.09
SHMT2-224ENST00000556737 ZBTB7CA1YPR0 619 aa14.51□□□□□ -0.09
SHMT2-224ENST00000556737 SOX12O15370 315 aa14.51□□□□□ -0.09
SHMT2-224ENST00000556737 TMF1P82094 1093 aa14.51□□□□□ -0.09
SHMT2-224ENST00000556737 CCDC125Q86Z20 511 aa14.51□□□□□ -0.09
SHMT2-224ENST00000556737 WDR17Q8IZU2 1322 aa14.5□□□□□ -0.09
SHMT2-224ENST00000556737 EVA1CP58658 441 aa14.5□□□□□ -0.09
SHMT2-224ENST00000556737 TCP11L2Q8N4U5 519 aa14.5□□□□□ -0.09
SHMT2-224ENST00000556737 USP35Q9P2H5 1018 aa14.5□□□□□ -0.09
SHMT2-224ENST00000556737 DISP2A7MBM2 1401 aa14.49□□□□□ -0.09
SHMT2-224ENST00000556737 FAM182BQ5T319 152 aa14.49□□□□□ -0.09
SHMT2-224ENST00000556737 THRAP3Q9Y2W1 955 aaKnown RBP14.49□□□□□ -0.09
SHMT2-224ENST00000556737 FAM208AQ9UK61 1670 aaKnown RBP14.49□□□□□ -0.09
SHMT2-224ENST00000556737 DEFB132Q7Z7B7 95 aa14.46□□□□□ -0.09
SHMT2-224ENST00000556737 RREB1Q92766 1687 aa14.46□□□□□ -0.1
SHMT2-224ENST00000556737 SBF2Q86WG5 1849 aa14.45□□□□□ -0.1
SHMT2-224ENST00000556737 ERBB3P21860 1342 aa14.45□□□□□ -0.1
SHMT2-224ENST00000556737 ANKRD26Q9UPS8 1709 aa14.44□□□□□ -0.1
SHMT2-224ENST00000556737 CDCA8Q53HL2 280 aa14.44□□□□□ -0.1
SHMT2-224ENST00000556737 TOM1L2Q6ZVM7 507 aa14.44□□□□□ -0.1
SHMT2-224ENST00000556737 NSD3Q9BZ95 1437 aa14.43□□□□□ -0.1
SHMT2-224ENST00000556737 CARD10Q9BWT7 1032 aa14.43□□□□□ -0.1
SHMT2-224ENST00000556737 CCDC7Q96M83 1385 aa14.43□□□□□ -0.1
SHMT2-224ENST00000556737 RGPD3A6NKT7 1758 aaPredicted RBP14.42□□□□□ -0.1
SHMT2-224ENST00000556737 RGPD4Q7Z3J3 1758 aa14.42□□□□□ -0.1
SHMT2-224ENST00000556737 OVOS2A0A0G2JMS6 1433 aa14.42□□□□□ -0.1
SHMT2-224ENST00000556737 TNS2Q63HR2 1409 aa14.42□□□□□ -0.1
SHMT2-224ENST00000556737 NUP188Q5SRE5 1749 aa14.42□□□□□ -0.1
SHMT2-224ENST00000556737 HSPA5P11021 654 aaKnown RBP14.42□□□□□ -0.1
SHMT2-224ENST00000556737 RGPD2P0DJD1 1756 aa14.42□□□□□ -0.1
SHMT2-224ENST00000556737 FYB1O15117 783 aa14.41□□□□□ -0.1
SHMT2-224ENST00000556737 SF3B2Q13435 895 aaKnown RBP14.41□□□□□ -0.1
SHMT2-224ENST00000556737 FAM196AQ6ZSG2 479 aa14.41□□□□□ -0.1
SHMT2-224ENST00000556737 COG3Q96JB2 828 aa14.41□□□□□ -0.1
SHMT2-224ENST00000556737 CARD14Q9BXL6 1004 aa14.41□□□□□ -0.1
SHMT2-224ENST00000556737 RTL1A6NKG5 1358 aa14.41□□□□□ -0.1
SHMT2-224ENST00000556737 MAP3K19Q56UN5 1328 aa14.41□□□□□ -0.1
SHMT2-224ENST00000556737 CSB-PGBD3P0DP91 1061 aa14.4□□□□□ -0.1
SHMT2-224ENST00000556737 EIF4G2P78344 907 aaKnown RBP eCLIP14.4□□□□□ -0.1
SHMT2-224ENST00000556737 PDE3BQ13370 1112 aa14.4□□□□□ -0.1
SHMT2-224ENST00000556737 BCL9O00512 1426 aa14.4□□□□□ -0.1
SHMT2-224ENST00000556737 SHANK3Q9BYB0 1731 aa14.39□□□□□ -0.11
SHMT2-224ENST00000556737 FBLN1P23142 703 aa14.39□□□□□ -0.11
SHMT2-224ENST00000556737 BAG6P46379 1132 aa14.39□□□□□ -0.11
SHMT2-224ENST00000556737 ANKRD24Q8TF21 1146 aa14.39□□□□□ -0.11
SHMT2-224ENST00000556737 GGNBP2Q9H3C7 697 aa14.39□□□□□ -0.11
SHMT2-224ENST00000556737 TRIM37O94972 964 aa14.38□□□□□ -0.11
SHMT2-224ENST00000556737 DDB1Q16531 1140 aa14.38□□□□□ -0.11
SHMT2-224ENST00000556737 IP6K1Q92551 441 aa14.38□□□□□ -0.11
SHMT2-224ENST00000556737 CDCA7Q9BWT1 371 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-224ENST00000556737 NHSQ6T4R5 1651 aa14.38□□□□□ -0.11
SHMT2-224ENST00000556737 SRCAPQ6ZRS2 3230 aa14.36□□□□□ -0.11
SHMT2-224ENST00000556737 HOXC9P31274 260 aa14.36□□□□□ -0.11
SHMT2-224ENST00000556737 EN1Q05925 392 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-224ENST00000556737 MARCH10Q8NA82 808 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-224ENST00000556737 PARD3Q8TEW0 1356 aa14.35□□□□□ -0.11
SHMT2-224ENST00000556737 LRP5O75197 1615 aa14.35□□□□□ -0.11
SHMT2-224ENST00000556737 RRS1Q15050 365 aaKnown RBP14.35□□□□□ -0.11
SHMT2-224ENST00000556737 CAMKK2Q96RR4 588 aa14.35□□□□□ -0.11
SHMT2-224ENST00000556737 NLRP2Q9NX02 1062 aa14.35□□□□□ -0.11
SHMT2-224ENST00000556737 C11orf95C9JLR9 678 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-224ENST00000556737 EZH2Q15910 746 aaKnown RBP14.34□□□□□ -0.11
SHMT2-224ENST00000556737 MEGF6O75095 1541 aa14.34□□□□□ -0.11
SHMT2-224ENST00000556737 KIF24Q5T7B8 1368 aa14.34□□□□□ -0.11
SHMT2-224ENST00000556737 FLT4P35916 1363 aa14.33□□□□□ -0.12
SHMT2-224ENST00000556737 APBA3O96018 575 aa14.32□□□□□ -0.12
SHMT2-224ENST00000556737 IL2RBP14784 551 aa14.32□□□□□ -0.12
SHMT2-224ENST00000556737 AMPHP49418 695 aa14.32□□□□□ -0.12
SHMT2-224ENST00000556737 PTF1AQ7RTS3 328 aa14.32□□□□□ -0.12
SHMT2-224ENST00000556737 INSRP06213 1382 aa14.32□□□□□ -0.12
SHMT2-224ENST00000556737 NCAPD2Q15021 1401 aa14.32□□□□□ -0.12
SHMT2-224ENST00000556737 MAP2P11137 1827 aaKnown RBP14.31□□□□□ -0.12
SHMT2-224ENST00000556737 LTV1Q96GA3 475 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-224ENST00000556737 DOT1LQ8TEK3 1739 aa14.31□□□□□ -0.12
SHMT2-224ENST00000556737 CGNL1Q0VF96 1302 aa14.31□□□□□ -0.12
SHMT2-224ENST00000556737 BTAF1O14981 1849 aa14.3□□□□□ -0.12
SHMT2-224ENST00000556737 EXOC5O00471 708 aa14.3□□□□□ -0.12
SHMT2-224ENST00000556737 POLR3GLQ9BT43 218 aa14.3□□□□□ -0.12
SHMT2-224ENST00000556737 SMG6Q86US8 1419 aaKnown RBP14.3□□□□□ -0.12
SHMT2-224ENST00000556737 PKD1L3Q7Z443 1732 aa14.29□□□□□ -0.12
SHMT2-224ENST00000556737 EMILIN1Q9Y6C2 1016 aa14.29□□□□□ -0.12
SHMT2-224ENST00000556737 KIF7Q2M1P5 1343 aa14.29□□□□□ -0.12
SHMT2-224ENST00000556737 PAPPAQ13219 1627 aa14.28□□□□□ -0.12
SHMT2-224ENST00000556737 HSP90AB2PQ58FF8 381 aa14.28□□□□□ -0.12
SHMT2-224ENST00000556737 BCL11BQ9C0K0 894 aaPredicted RBP14.28□□□□□ -0.12
SHMT2-224ENST00000556737 NSD2O96028 1365 aa14.27□□□□□ -0.12
SHMT2-224ENST00000556737 PSDA5PKW4 1024 aaPredicted RBP14.27□□□□□ -0.13
SHMT2-224ENST00000556737 NBPF6Q5VWK0 638 aa14.27□□□□□ -0.13
SHMT2-224ENST00000556737 NBPF4Q96M43 638 aa14.27□□□□□ -0.13
SHMT2-224ENST00000556737 PANK3Q9H999 370 aa14.27□□□□□ -0.13
SHMT2-224ENST00000556737 CASZ1Q86V15 1759 aa14.25□□□□□ -0.13
SHMT2-224ENST00000556737 TOGARAM1Q9Y4F4 1720 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms