RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 CDC42BPGQ6DT37 1551 aa10.64□□□□□ -0.71
MARK3-210ENST00000556463 ARHGEF28Q8N1W1 1705 aaKnown RBP10.64□□□□□ -0.71
MARK3-210ENST00000556463 PIK3R4Q99570 1358 aa10.64□□□□□ -0.71
MARK3-210ENST00000556463 MFAP1P55081 439 aaKnown RBP10.64□□□□□ -0.71
MARK3-210ENST00000556463 DDX19BQ9UMR2 479 aa10.64□□□□□ -0.71
MARK3-210ENST00000556463 CHD1O14646 1710 aa10.63□□□□□ -0.71
MARK3-210ENST00000556463 PPIP5K1Q6PFW1 1433 aa10.63□□□□□ -0.71
MARK3-210ENST00000556463 ABCC11Q96J66 1382 aa10.63□□□□□ -0.71
MARK3-210ENST00000556463 RRP7AQ9Y3A4 280 aaKnown RBP10.63□□□□□ -0.71
MARK3-210ENST00000556463 ERCC6L2Q5T890 1561 aa10.63□□□□□ -0.71
MARK3-210ENST00000556463 TULP4Q9NRJ4 1543 aa10.63□□□□□ -0.71
MARK3-210ENST00000556463 XPCQ01831 940 aaPredicted RBP10.63□□□□□ -0.71
MARK3-210ENST00000556463 BMP2KLQ5H9B9 411 aa10.63□□□□□ -0.71
MARK3-210ENST00000556463 GTPBP6O43824 516 aaPredicted RBP10.62□□□□□ -0.71
MARK3-210ENST00000556463 EFCAB2Q5VUJ9 269 aa10.62□□□□□ -0.71
MARK3-210ENST00000556463 ZBTB9Q96C00 473 aa10.62□□□□□ -0.71
MARK3-210ENST00000556463 BCL2L13Q9BXK5 485 aa10.62□□□□□ -0.71
MARK3-210ENST00000556463 TRIM35Q9UPQ4 493 aa10.62□□□□□ -0.71
MARK3-210ENST00000556463 KIF16BQ96L93 1317 aa10.62□□□□□ -0.71
MARK3-210ENST00000556463 CCDC173Q0VFZ6 552 aa10.62□□□□□ -0.71
MARK3-210ENST00000556463 HS1BP3Q53T59 392 aa10.62□□□□□ -0.71
MARK3-210ENST00000556463 ATF7IPQ6VMQ6 1270 aa10.62□□□□□ -0.71
MARK3-210ENST00000556463 OFD1O75665 1012 aa10.62□□□□□ -0.71
MARK3-210ENST00000556463 MORC1Q86VD1 984 aa10.62□□□□□ -0.71
MARK3-210ENST00000556463 HS6ST3Q8IZP7 471 aa10.62□□□□□ -0.71
MARK3-210ENST00000556463 IPO4Q8TEX9 1081 aaKnown RBP10.62□□□□□ -0.71
MARK3-210ENST00000556463 ZFP91Q96JP5 570 aaPredicted RBP10.62□□□□□ -0.71
MARK3-210ENST00000556463 MTHFSP49914 203 aa10.61□□□□□ -0.71
MARK3-210ENST00000556463 ZNF830Q96NB3 372 aaPredicted RBP10.61□□□□□ -0.71
MARK3-210ENST00000556463 CD2BP2O95400 341 aaKnown RBP10.61□□□□□ -0.71
MARK3-210ENST00000556463 ANKRD36BQ8N2N9 1353 aa10.61□□□□□ -0.71
MARK3-210ENST00000556463 YEATS2Q9ULM3 1422 aa10.61□□□□□ -0.71
MARK3-210ENST00000556463 FAM177BA6PVY3 158 aa10.61□□□□□ -0.71
MARK3-210ENST00000556463 CYP2E1P05181 493 aaPredicted RBP10.61□□□□□ -0.71
MARK3-210ENST00000556463 SSH1Q8WYL5 1049 aa10.61□□□□□ -0.71
MARK3-210ENST00000556463 GBP4Q96PP9 640 aa10.61□□□□□ -0.71
MARK3-210ENST00000556463 SLC24A3Q9HC58 644 aa10.61□□□□□ -0.71
MARK3-210ENST00000556463 ZNF445P59923 1031 aa10.6□□□□□ -0.71
MARK3-210ENST00000556463 RNF25Q96BH1 459 aaPredicted RBP10.6□□□□□ -0.71
MARK3-210ENST00000556463 PDLIM2Q96JY6 352 aa10.6□□□□□ -0.71
MARK3-210ENST00000556463 PIK3C2BO00750 1634 aa10.6□□□□□ -0.71
MARK3-210ENST00000556463 KLHL40Q2TBA0 621 aa10.6□□□□□ -0.71
MARK3-210ENST00000556463 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.6□□□□□ -0.71
MARK3-210ENST00000556463 C14orf93Q9H972 538 aaKnown RBP10.6□□□□□ -0.71
MARK3-210ENST00000556463 APPP05067 770 aa10.6□□□□□ -0.71
MARK3-210ENST00000556463 BRD2P25440 801 aaKnown RBP10.6□□□□□ -0.71
MARK3-210ENST00000556463 SPAG9O60271 1321 aaKnown RBP10.59□□□□□ -0.71
MARK3-210ENST00000556463 ZSCAN30Q86W11 494 aa10.59□□□□□ -0.71
MARK3-210ENST00000556463 TSC1Q92574 1164 aa10.59□□□□□ -0.71
MARK3-210ENST00000556463 SLC12A5Q9H2X9 1139 aa10.59□□□□□ -0.71
MARK3-210ENST00000556463 GLI2P10070 1586 aa10.59□□□□□ -0.71
MARK3-210ENST00000556463 PNPLA6Q8IY17 1366 aa10.59□□□□□ -0.71
MARK3-210ENST00000556463 RIPK4P57078 832 aa10.59□□□□□ -0.71
MARK3-210ENST00000556463 MAP7D2Q96T17 732 aa10.59□□□□□ -0.71
MARK3-210ENST00000556463 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.59□□□□□ -0.71
MARK3-210ENST00000556463 CHD1LQ86WJ1 897 aa10.59□□□□□ -0.71
MARK3-210ENST00000556463 CLTCQ00610 1675 aaKnown RBP10.58□□□□□ -0.71
MARK3-210ENST00000556463 ZNF500O60304 480 aaPredicted RBP10.58□□□□□ -0.72
MARK3-210ENST00000556463 ALDH1L2Q3SY69 923 aa10.58□□□□□ -0.72
MARK3-210ENST00000556463 TMEM57Q8N5G2 664 aa10.58□□□□□ -0.72
MARK3-210ENST00000556463 PTCH1Q13635 1447 aa10.58□□□□□ -0.72
MARK3-210ENST00000556463 K7ELQ4 463 aaPredicted RBP10.58□□□□□ -0.72
MARK3-210ENST00000556463 TNNT3P45378 269 aaPredicted RBP10.58□□□□□ -0.72
MARK3-210ENST00000556463 EXOSC9Q06265 439 aaKnown RBP10.58□□□□□ -0.72
MARK3-210ENST00000556463 FTSJ3Q8IY81 847 aaKnown RBP10.58□□□□□ -0.72
MARK3-210ENST00000556463 NOB1Q9ULX3 412 aaKnown RBP10.58□□□□□ -0.72
MARK3-210ENST00000556463 KIDINS220Q9ULH0 1771 aa10.58□□□□□ -0.72
MARK3-210ENST00000556463 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.57□□□□□ -0.72
MARK3-210ENST00000556463 TMPOP42166 694 aaKnown RBP10.57□□□□□ -0.72
MARK3-210ENST00000556463 CCDC9Q9Y3X0 531 aaKnown RBP10.57□□□□□ -0.72
MARK3-210ENST00000556463 KNDC1Q76NI1 1749 aa10.57□□□□□ -0.72
MARK3-210ENST00000556463 SMAP1Q8IYB5 467 aaPredicted RBP10.56□□□□□ -0.72
MARK3-210ENST00000556463 TSR2Q969E8 191 aaKnown RBP10.56□□□□□ -0.72
MARK3-210ENST00000556463 CFAP53Q96M91 514 aa10.56□□□□□ -0.72
MARK3-210ENST00000556463 KCNJ4P48050 445 aa10.56□□□□□ -0.72
MARK3-210ENST00000556463 NOL7Q9UMY1 257 aaKnown RBP10.56□□□□□ -0.72
MARK3-210ENST00000556463 CD163L1Q9NR16 1453 aa10.56□□□□□ -0.72
MARK3-210ENST00000556463 ZBTB7BO15156 539 aaPredicted RBP10.56□□□□□ -0.72
MARK3-210ENST00000556463 SMC4Q9NTJ3 1288 aa10.56□□□□□ -0.72
MARK3-210ENST00000556463 BAG4O95429 457 aaKnown RBP10.55□□□□□ -0.72
MARK3-210ENST00000556463 NASPP49321 788 aaPredicted RBP10.55□□□□□ -0.72
MARK3-210ENST00000556463 AFAP1Q8N556 730 aa10.55□□□□□ -0.72
MARK3-210ENST00000556463 GAS2L2Q8NHY3 880 aa10.55□□□□□ -0.72
MARK3-210ENST00000556463 ZNF428Q96B54 188 aa10.55□□□□□ -0.72
MARK3-210ENST00000556463 GCC1Q96CN9 775 aa10.55□□□□□ -0.72
MARK3-210ENST00000556463 KCNV2Q8TDN2 545 aa10.55□□□□□ -0.72
MARK3-210ENST00000556463 ARHGAP45Q92619 1136 aa10.55□□□□□ -0.72
MARK3-210ENST00000556463 SSFA2P28290 1259 aa10.54□□□□□ -0.72
MARK3-210ENST00000556463 TBC1D9Q6ZT07 1266 aa10.54□□□□□ -0.72
MARK3-210ENST00000556463 ITPRIPQ8IWB1 547 aa10.54□□□□□ -0.72
MARK3-210ENST00000556463 U3KPZ7 1027 aaPredicted RBP10.54□□□□□ -0.72
MARK3-210ENST00000556463 CAMSAP1Q5T5Y3 1602 aa10.54□□□□□ -0.72
MARK3-210ENST00000556463 ZC3H15Q8WU90 426 aaKnown RBP10.54□□□□□ -0.72
MARK3-210ENST00000556463 LMBRD1Q9NUN5 540 aa10.54□□□□□ -0.72
MARK3-210ENST00000556463 SIRT2Q8IXJ6 389 aa10.54□□□□□ -0.72
MARK3-210ENST00000556463 ABCC3O15438 1527 aa10.53□□□□□ -0.72
MARK3-210ENST00000556463 RPGRIP1LQ68CZ1 1315 aa10.53□□□□□ -0.72
MARK3-210ENST00000556463 NEXMIFQ5QGS0 1516 aa10.53□□□□□ -0.72
MARK3-210ENST00000556463 SAMD1Q6SPF0 538 aaPredicted RBP10.53□□□□□ -0.72
MARK3-210ENST00000556463 JARID2Q92833 1246 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms