RNA–Protein interactions for RNA: ENST00000556296.1

APEX1-213, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 4

Gene APEX1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-213ENST00000556296 TTC21AQ8NDW8 1320 aa17.92■□□□□ 0.46
APEX1-213ENST00000556296 OVOS2A0A0G2JMS6 1433 aa17.91■□□□□ 0.46
APEX1-213ENST00000556296 OVOS2A0A0J9YW53 1432 aa17.91■□□□□ 0.46
APEX1-213ENST00000556296 OVOS2Q6IE36 1432 aa17.91■□□□□ 0.46
APEX1-213ENST00000556296 COL18A1P39060 1754 aa17.9■□□□□ 0.46
APEX1-213ENST00000556296 PPP1R1BQ9UD71 204 aaPredicted RBP17.9■□□□□ 0.46
APEX1-213ENST00000556296 TTC21BQ7Z4L5 1316 aa17.9■□□□□ 0.46
APEX1-213ENST00000556296 WDR17Q8IZU2 1322 aa17.9■□□□□ 0.46
APEX1-213ENST00000556296 CPSF1Q10570 1443 aaKnown RBP17.89■□□□□ 0.46
APEX1-213ENST00000556296 TNS1Q9HBL0 1735 aaKnown RBP17.89■□□□□ 0.46
APEX1-213ENST00000556296 PLSCR1O15162 318 aa17.89■□□□□ 0.45
APEX1-213ENST00000556296 BCL11BQ9C0K0 894 aaPredicted RBP17.89■□□□□ 0.45
APEX1-213ENST00000556296 ARHGEF25Q86VW2 580 aa17.88■□□□□ 0.45
APEX1-213ENST00000556296 CARD10Q9BWT7 1032 aa17.88■□□□□ 0.45
APEX1-213ENST00000556296 SPON1Q9HCB6 807 aa17.88■□□□□ 0.45
APEX1-213ENST00000556296 MON2Q7Z3U7 1717 aa17.88■□□□□ 0.45
APEX1-213ENST00000556296 EXOC5O00471 708 aa17.87■□□□□ 0.45
APEX1-213ENST00000556296 SOX12O15370 315 aa17.87■□□□□ 0.45
APEX1-213ENST00000556296 CARD11Q9BXL7 1154 aa17.86■□□□□ 0.45
APEX1-213ENST00000556296 PARP4Q9UKK3 1724 aaKnown RBP17.86■□□□□ 0.45
APEX1-213ENST00000556296 KCNQ2O43526 872 aa17.85■□□□□ 0.45
APEX1-213ENST00000556296 KTN1Q86UP2 1357 aaKnown RBP17.85■□□□□ 0.45
APEX1-213ENST00000556296 AXIN2Q9Y2T1 843 aa17.85■□□□□ 0.45
APEX1-213ENST00000556296 HDGFL2Q7Z4V5 671 aaPredicted RBP17.84■□□□□ 0.45
APEX1-213ENST00000556296 RGPD5Q99666 1765 aa17.84■□□□□ 0.45
APEX1-213ENST00000556296 USP54Q70EL1 1684 aa17.83■□□□□ 0.45
APEX1-213ENST00000556296 CCDC7Q96M83 1385 aa17.83■□□□□ 0.45
APEX1-213ENST00000556296 CD163L1Q9NR16 1453 aa17.82■□□□□ 0.44
APEX1-213ENST00000556296 TMC1Q8TDI8 760 aa17.82■□□□□ 0.44
APEX1-213ENST00000556296 NFAT5O94916 1531 aa17.82■□□□□ 0.44
APEX1-213ENST00000556296 MARCH10Q8NA82 808 aaPredicted RBP17.81■□□□□ 0.44
APEX1-213ENST00000556296 WNK3Q9BYP7 1800 aa17.81■□□□□ 0.44
APEX1-213ENST00000556296 BCL9O00512 1426 aa17.81■□□□□ 0.44
APEX1-213ENST00000556296 SLC24A1O60721 1099 aa17.8■□□□□ 0.44
APEX1-213ENST00000556296 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.8■□□□□ 0.44
APEX1-213ENST00000556296 TERF2IPQ9NYB0 399 aa17.8■□□□□ 0.44
APEX1-213ENST00000556296 STK32BQ9NY57 414 aa17.79■□□□□ 0.44
APEX1-213ENST00000556296 USP31Q70CQ4 1352 aa17.79■□□□□ 0.44
APEX1-213ENST00000556296 PEAK1Q9H792 1746 aa17.78■□□□□ 0.44
APEX1-213ENST00000556296 PUS7Q96PZ0 661 aaKnown RBP17.78■□□□□ 0.44
APEX1-213ENST00000556296 LRRC37A3O60309 1634 aa17.78■□□□□ 0.44
APEX1-213ENST00000556296 ABCC6O95255 1503 aa17.77■□□□□ 0.44
APEX1-213ENST00000556296 NLRP2Q9NX02 1062 aa17.77■□□□□ 0.44
APEX1-213ENST00000556296 USP47Q96K76 1375 aa17.77■□□□□ 0.43
APEX1-213ENST00000556296 NINLQ9Y2I6 1382 aa17.77■□□□□ 0.43
APEX1-213ENST00000556296 SBF2Q86WG5 1849 aa17.77■□□□□ 0.43
APEX1-213ENST00000556296 YY1P25490 414 aa17.76■□□□□ 0.43
APEX1-213ENST00000556296 RREB1Q92766 1687 aa17.76■□□□□ 0.43
APEX1-213ENST00000556296 IL2RBP14784 551 aa17.75■□□□□ 0.43
APEX1-213ENST00000556296 TESK2Q96S53 571 aa17.75■□□□□ 0.43
APEX1-213ENST00000556296 SLC12A5Q9H2X9 1139 aa17.75■□□□□ 0.43
APEX1-213ENST00000556296 TXNRD1Q16881 649 aa17.74■□□□□ 0.43
APEX1-213ENST00000556296 NME9Q86XW9 330 aa17.74■□□□□ 0.43
APEX1-213ENST00000556296 LTN1O94822 1766 aa17.74■□□□□ 0.43
APEX1-213ENST00000556296 EDC4Q6P2E9 1401 aaKnown RBP17.73■□□□□ 0.43
APEX1-213ENST00000556296 EIF4G2P78344 907 aaKnown RBP eCLIP17.73■□□□□ 0.43
APEX1-213ENST00000556296 ERBB3P21860 1342 aa17.72■□□□□ 0.43
APEX1-213ENST00000556296 A0A1W2PP64 1363 aa17.72■□□□□ 0.43
APEX1-213ENST00000556296 ST20-MTHFSA0A0A6YYL1 179 aa17.72■□□□□ 0.43
APEX1-213ENST00000556296 PROM2Q8N271 834 aa17.72■□□□□ 0.43
APEX1-213ENST00000556296 ANKRD24Q8TF21 1146 aa17.72■□□□□ 0.43
APEX1-213ENST00000556296 ANO8Q9HCE9 1232 aaPredicted RBP17.72■□□□□ 0.43
APEX1-213ENST00000556296 NUP188Q5SRE5 1749 aa17.72■□□□□ 0.43
APEX1-213ENST00000556296 SLC15A2Q16348 729 aa17.71■□□□□ 0.43
APEX1-213ENST00000556296 PTF1AQ7RTS3 328 aa17.71■□□□□ 0.43
APEX1-213ENST00000556296 TNS2Q63HR2 1409 aa17.71■□□□□ 0.43
APEX1-213ENST00000556296 ZBTB7AO95365 584 aa17.7■□□□□ 0.42
APEX1-213ENST00000556296 RGPD3A6NKT7 1758 aaPredicted RBP17.69■□□□□ 0.42
APEX1-213ENST00000556296 RGPD4Q7Z3J3 1758 aa17.69■□□□□ 0.42
APEX1-213ENST00000556296 ACSBG1Q96GR2 724 aa17.68■□□□□ 0.42
APEX1-213ENST00000556296 COG3Q96JB2 828 aa17.68■□□□□ 0.42
APEX1-213ENST00000556296 MTFR1LQ9H019 292 aa17.68■□□□□ 0.42
APEX1-213ENST00000556296 HSPA5P11021 654 aaKnown RBP17.67■□□□□ 0.42
APEX1-213ENST00000556296 IP6K1Q92551 441 aa17.67■□□□□ 0.42
APEX1-213ENST00000556296 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
APEX1-213ENST00000556296 AMPHP49418 695 aa17.64■□□□□ 0.41
APEX1-213ENST00000556296 LTV1Q96GA3 475 aaPredicted RBP17.64■□□□□ 0.41
APEX1-213ENST00000556296 SLC27A3Q5K4L6 730 aa17.63■□□□□ 0.41
APEX1-213ENST00000556296 DDX54Q8TDD1 881 aaKnown RBP17.63■□□□□ 0.41
APEX1-213ENST00000556296 HMGB2P26583 209 aaKnown RBP17.62■□□□□ 0.41
APEX1-213ENST00000556296 PTGER2P43116 358 aa17.62■□□□□ 0.41
APEX1-213ENST00000556296 PDGFDQ9GZP0 370 aaPredicted RBP17.62■□□□□ 0.41
APEX1-213ENST00000556296 ANKRD36BQ8N2N9 1353 aa17.62■□□□□ 0.41
APEX1-213ENST00000556296 TMF1P82094 1093 aa17.61■□□□□ 0.41
APEX1-213ENST00000556296 FAM208AQ9UK61 1670 aaKnown RBP17.61■□□□□ 0.41
APEX1-213ENST00000556296 CDCA8Q53HL2 280 aa17.6■□□□□ 0.41
APEX1-213ENST00000556296 SYTL4Q96C24 671 aaPredicted RBP17.59■□□□□ 0.41
APEX1-213ENST00000556296 ARXQ96QS3 562 aa17.59■□□□□ 0.41
APEX1-213ENST00000556296 SYT17Q9BSW7 474 aa17.59■□□□□ 0.41
APEX1-213ENST00000556296 FHDC1Q9C0D6 1143 aaPredicted RBP17.59■□□□□ 0.41
APEX1-213ENST00000556296 NHSQ6T4R5 1651 aa17.58■□□□□ 0.41
APEX1-213ENST00000556296 POLD1P28340 1107 aa17.58■□□□□ 0.4
APEX1-213ENST00000556296 HOXC9P31274 260 aa17.58■□□□□ 0.4
APEX1-213ENST00000556296 SLC16A10Q8TF71 515 aa17.58■□□□□ 0.4
APEX1-213ENST00000556296 KAT6BQ8WYB5 2073 aa17.58■□□□□ 0.4
APEX1-213ENST00000556296 MAP3K19Q56UN5 1328 aa17.57■□□□□ 0.4
APEX1-213ENST00000556296 ZCRB1Q8TBF4 217 aaKnown RBP17.57■□□□□ 0.4
APEX1-213ENST00000556296 RGPD2P0DJD1 1756 aa17.56■□□□□ 0.4
APEX1-213ENST00000556296 CGNL1Q0VF96 1302 aa17.56■□□□□ 0.4
APEX1-213ENST00000556296 MYOM1P52179 1685 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms