RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 CD163L1Q9NR16 1453 aa30.52■■■□□ 2.48
SDR39U1-216ENST00000556175 SOX12O15370 315 aa30.52■■■□□ 2.48
SDR39U1-216ENST00000556175 APBA3O96018 575 aa30.52■■■□□ 2.48
SDR39U1-216ENST00000556175 USP31Q70CQ4 1352 aa30.52■■■□□ 2.48
SDR39U1-216ENST00000556175 AXIN2Q9Y2T1 843 aa30.51■■■□□ 2.47
SDR39U1-216ENST00000556175 USP54Q70EL1 1684 aa30.51■■■□□ 2.47
SDR39U1-216ENST00000556175 LRP5O75197 1615 aa30.51■■■□□ 2.47
SDR39U1-216ENST00000556175 PSDA5PKW4 1024 aaPredicted RBP30.5■■■□□ 2.47
SDR39U1-216ENST00000556175 SLC24A1O60721 1099 aa30.5■■■□□ 2.47
SDR39U1-216ENST00000556175 EZH2Q15910 746 aaKnown RBP30.5■■■□□ 2.47
SDR39U1-216ENST00000556175 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.5■■■□□ 2.47
SDR39U1-216ENST00000556175 CAMKK2Q96RR4 588 aa30.5■■■□□ 2.47
SDR39U1-216ENST00000556175 CDCA7Q9BWT1 371 aaPredicted RBP30.5■■■□□ 2.47
SDR39U1-216ENST00000556175 LRRC37A3O60309 1634 aa30.5■■■□□ 2.47
SDR39U1-216ENST00000556175 OVOS2A0A0G2JMS6 1433 aa30.49■■■□□ 2.47
SDR39U1-216ENST00000556175 OVOS2A0A0J9YW53 1432 aa30.49■■■□□ 2.47
SDR39U1-216ENST00000556175 OVOS2Q6IE36 1432 aa30.49■■■□□ 2.47
SDR39U1-216ENST00000556175 TERF2IPQ9NYB0 399 aa30.49■■■□□ 2.47
SDR39U1-216ENST00000556175 WNK3Q9BYP7 1800 aa30.48■■■□□ 2.47
SDR39U1-216ENST00000556175 DDB1Q16531 1140 aa30.48■■■□□ 2.47
SDR39U1-216ENST00000556175 EDC4Q6P2E9 1401 aaKnown RBP30.47■■■□□ 2.47
SDR39U1-216ENST00000556175 CSB-PGBD3P0DP91 1061 aa30.47■■■□□ 2.47
SDR39U1-216ENST00000556175 NINLQ9Y2I6 1382 aa30.46■■■□□ 2.47
SDR39U1-216ENST00000556175 CARD10Q9BWT7 1032 aa30.45■■■□□ 2.47
SDR39U1-216ENST00000556175 SLC12A5Q9H2X9 1139 aa30.45■■■□□ 2.47
SDR39U1-216ENST00000556175 RGPD5Q99666 1765 aa30.45■■■□□ 2.46
SDR39U1-216ENST00000556175 PEAK1Q9H792 1746 aa30.44■■■□□ 2.46
SDR39U1-216ENST00000556175 NME9Q86XW9 330 aa30.43■■■□□ 2.46
SDR39U1-216ENST00000556175 RREB1Q92766 1687 aa30.42■■■□□ 2.46
SDR39U1-216ENST00000556175 A0A1W2PP64 1363 aa30.42■■■□□ 2.46
SDR39U1-216ENST00000556175 R3HDM1Q15032 1099 aaKnown RBP30.42■■■□□ 2.46
SDR39U1-216ENST00000556175 CCDC7Q96M83 1385 aa30.41■■■□□ 2.46
SDR39U1-216ENST00000556175 ST20-MTHFSA0A0A6YYL1 179 aa30.41■■■□□ 2.46
SDR39U1-216ENST00000556175 TESK2Q96S53 571 aa30.41■■■□□ 2.46
SDR39U1-216ENST00000556175 LTN1O94822 1766 aa30.37■■■□□ 2.45
SDR39U1-216ENST00000556175 NUP188Q5SRE5 1749 aa30.36■■■□□ 2.45
SDR39U1-216ENST00000556175 NBPF14Q5TI25 921 aa30.36■■■□□ 2.45
SDR39U1-216ENST00000556175 BCL9O00512 1426 aa30.36■■■□□ 2.45
SDR39U1-216ENST00000556175 RGPD3A6NKT7 1758 aaPredicted RBP30.35■■■□□ 2.45
SDR39U1-216ENST00000556175 RGPD4Q7Z3J3 1758 aa30.35■■■□□ 2.45
SDR39U1-216ENST00000556175 SBF2Q86WG5 1849 aa30.34■■■□□ 2.45
SDR39U1-216ENST00000556175 ERBB3P21860 1342 aa30.34■■■□□ 2.45
SDR39U1-216ENST00000556175 EXOC5O00471 708 aa30.32■■■□□ 2.44
SDR39U1-216ENST00000556175 MARCH10Q8NA82 808 aaPredicted RBP30.32■■■□□ 2.44
SDR39U1-216ENST00000556175 USP47Q96K76 1375 aa30.31■■■□□ 2.44
SDR39U1-216ENST00000556175 BCL11BQ9C0K0 894 aaPredicted RBP30.31■■■□□ 2.44
SDR39U1-216ENST00000556175 TNS2Q63HR2 1409 aa30.3■■■□□ 2.44
SDR39U1-216ENST00000556175 PLSCR1O15162 318 aa30.29■■■□□ 2.44
SDR39U1-216ENST00000556175 TMF1P82094 1093 aa30.29■■■□□ 2.44
SDR39U1-216ENST00000556175 NLRP2Q9NX02 1062 aa30.29■■■□□ 2.44
SDR39U1-216ENST00000556175 ANKRD36BQ8N2N9 1353 aa30.28■■■□□ 2.44
SDR39U1-216ENST00000556175 ANKRD24Q8TF21 1146 aa30.27■■■□□ 2.44
SDR39U1-216ENST00000556175 COG3Q96JB2 828 aa30.26■■■□□ 2.43
SDR39U1-216ENST00000556175 TIMELESSQ9UNS1 1208 aa30.26■■■□□ 2.43
SDR39U1-216ENST00000556175 IL2RBP14784 551 aa30.23■■■□□ 2.43
SDR39U1-216ENST00000556175 CDCA8Q53HL2 280 aa30.23■■■□□ 2.43
SDR39U1-216ENST00000556175 IP6K1Q92551 441 aa30.22■■■□□ 2.43
SDR39U1-216ENST00000556175 FAM208AQ9UK61 1670 aaKnown RBP30.22■■■□□ 2.43
SDR39U1-216ENST00000556175 CLSPNQ9HAW4 1339 aa30.22■■■□□ 2.43
SDR39U1-216ENST00000556175 PTF1AQ7RTS3 328 aa30.18■■■□□ 2.42
SDR39U1-216ENST00000556175 NHSQ6T4R5 1651 aa30.16■■■□□ 2.42
SDR39U1-216ENST00000556175 MAP3K19Q56UN5 1328 aa30.15■■■□□ 2.42
SDR39U1-216ENST00000556175 AMPHP49418 695 aa30.14■■■□□ 2.42
SDR39U1-216ENST00000556175 RTL1A6NKG5 1358 aa30.14■■■□□ 2.41
SDR39U1-216ENST00000556175 HOXC9P31274 260 aa30.12■■■□□ 2.41
SDR39U1-216ENST00000556175 LTV1Q96GA3 475 aaPredicted RBP30.12■■■□□ 2.41
SDR39U1-216ENST00000556175 PCGF6Q9BYE7 350 aa30.1■■■□□ 2.41
SDR39U1-216ENST00000556175 SPON1Q9HCB6 807 aa30.1■■■□□ 2.41
SDR39U1-216ENST00000556175 FYB1O15117 783 aa30.09■■■□□ 2.41
SDR39U1-216ENST00000556175 TXNRD1Q16881 649 aa30.09■■■□□ 2.41
SDR39U1-216ENST00000556175 PROM2Q8N271 834 aa30.09■■■□□ 2.41
SDR39U1-216ENST00000556175 KCNQ2O43526 872 aa30.08■■■□□ 2.41
SDR39U1-216ENST00000556175 ANO8Q9HCE9 1232 aaPredicted RBP30.08■■■□□ 2.41
SDR39U1-216ENST00000556175 KIF20BQ96Q89 1820 aa30.08■■■□□ 2.41
SDR39U1-216ENST00000556175 ACSBG1Q96GR2 724 aa30.07■■■□□ 2.4
SDR39U1-216ENST00000556175 GGNBP2Q9H3C7 697 aa30.07■■■□□ 2.4
SDR39U1-216ENST00000556175 STK32BQ9NY57 414 aa30.05■■■□□ 2.4
SDR39U1-216ENST00000556175 SMG6Q86US8 1419 aaKnown RBP30.05■■■□□ 2.4
SDR39U1-216ENST00000556175 MYOM1P52179 1685 aa30.04■■■□□ 2.4
SDR39U1-216ENST00000556175 FBLN1P23142 703 aa30.03■■■□□ 2.4
SDR39U1-216ENST00000556175 PPP1R1BQ9UD71 204 aaPredicted RBP30.03■■■□□ 2.4
SDR39U1-216ENST00000556175 CASZ1Q86V15 1759 aa30.03■■■□□ 2.4
SDR39U1-216ENST00000556175 RRS1Q15050 365 aaKnown RBP30.02■■■□□ 2.4
SDR39U1-216ENST00000556175 BTAF1O14981 1849 aa30.01■■■□□ 2.4
SDR39U1-216ENST00000556175 KIF24Q5T7B8 1368 aa30.01■■■□□ 2.39
SDR39U1-216ENST00000556175 DDX54Q8TDD1 881 aaKnown RBP30■■■□□ 2.39
SDR39U1-216ENST00000556175 SLC15A2Q16348 729 aa29.99■■■□□ 2.39
SDR39U1-216ENST00000556175 NSD3Q9BZ95 1437 aa29.98■■■□□ 2.39
SDR39U1-216ENST00000556175 RGPD2P0DJD1 1756 aa29.98■■■□□ 2.39
SDR39U1-216ENST00000556175 FLT4P35916 1363 aa29.97■■■□□ 2.39
SDR39U1-216ENST00000556175 KAT6BQ8WYB5 2073 aa29.97■■■□□ 2.39
SDR39U1-216ENST00000556175 CGNL1Q0VF96 1302 aa29.96■■■□□ 2.39
SDR39U1-216ENST00000556175 INSRP06213 1382 aa29.96■■■□□ 2.39
SDR39U1-216ENST00000556175 ZCRB1Q8TBF4 217 aaKnown RBP29.95■■■□□ 2.39
SDR39U1-216ENST00000556175 MEGF6O75095 1541 aa29.95■■■□□ 2.38
SDR39U1-216ENST00000556175 CARD14Q9BXL6 1004 aa29.94■■■□□ 2.38
SDR39U1-216ENST00000556175 NBPF6Q5VWK0 638 aa29.93■■■□□ 2.38
SDR39U1-216ENST00000556175 NBPF4Q96M43 638 aa29.93■■■□□ 2.38
SDR39U1-216ENST00000556175 PAPPAQ13219 1627 aa29.93■■■□□ 2.38
SDR39U1-216ENST00000556175 RAPGEF4Q8WZA2 1011 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms