RNA–Protein interactions for RNA: ENST00000556167.1

PSMA6-212, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-212ENST00000556167 VPS72Q15906 364 aa22.25■■□□□ 1.15
PSMA6-212ENST00000556167 AMER1Q5JTC6 1135 aaPredicted RBP22.25■■□□□ 1.15
PSMA6-212ENST00000556167 COL5A2P05997 1499 aaPredicted RBP22.24■■□□□ 1.15
PSMA6-212ENST00000556167 RXRBP28702 533 aa22.24■■□□□ 1.15
PSMA6-212ENST00000556167 RTL1A6NKG5 1358 aa22.24■■□□□ 1.15
PSMA6-212ENST00000556167 KIF24Q5T7B8 1368 aa22.24■■□□□ 1.15
PSMA6-212ENST00000556167 MORC1Q86VD1 984 aa22.23■■□□□ 1.15
PSMA6-212ENST00000556167 BLMP54132 1417 aaPredicted RBP22.23■■□□□ 1.15
PSMA6-212ENST00000556167 AMPHP49418 695 aa22.22■■□□□ 1.15
PSMA6-212ENST00000556167 GJD4Q96KN9 370 aaPredicted RBP22.22■■□□□ 1.15
PSMA6-212ENST00000556167 STRN4Q9NRL3 753 aa22.22■■□□□ 1.15
PSMA6-212ENST00000556167 FAM208AQ9UK61 1670 aaKnown RBP22.22■■□□□ 1.15
PSMA6-212ENST00000556167 MAP3K19Q56UN5 1328 aa22.22■■□□□ 1.15
PSMA6-212ENST00000556167 IP6K1Q92551 441 aa22.21■■□□□ 1.15
PSMA6-212ENST00000556167 CCDC9Q9Y3X0 531 aaKnown RBP22.21■■□□□ 1.15
PSMA6-212ENST00000556167 CDK12Q9NYV4 1490 aaPredicted RBP22.21■■□□□ 1.15
PSMA6-212ENST00000556167 ZNF316A6NFI3 1004 aaPredicted RBP22.2■■□□□ 1.14
PSMA6-212ENST00000556167 AXIN2Q9Y2T1 843 aa22.2■■□□□ 1.14
PSMA6-212ENST00000556167 GLI3P10071 1580 aa22.2■■□□□ 1.14
PSMA6-212ENST00000556167 RRS1Q15050 365 aaKnown RBP22.19■■□□□ 1.14
PSMA6-212ENST00000556167 FLT4P35916 1363 aa22.18■■□□□ 1.14
PSMA6-212ENST00000556167 WDR17Q8IZU2 1322 aa22.18■■□□□ 1.14
PSMA6-212ENST00000556167 CRB1P82279 1406 aa22.17■■□□□ 1.14
PSMA6-212ENST00000556167 SPATA31A5Q5VU36 1347 aa22.17■■□□□ 1.14
PSMA6-212ENST00000556167 SPATA31A7Q8IWB4 1347 aa22.17■■□□□ 1.14
PSMA6-212ENST00000556167 FBLN1P23142 703 aa22.17■■□□□ 1.14
PSMA6-212ENST00000556167 HOXC9P31274 260 aa22.17■■□□□ 1.14
PSMA6-212ENST00000556167 CC2D1BQ5T0F9 858 aaKnown RBP22.17■■□□□ 1.14
PSMA6-212ENST00000556167 PEAK1Q9H792 1746 aa22.17■■□□□ 1.14
PSMA6-212ENST00000556167 CSB-PGBD3P0DP91 1061 aa22.16■■□□□ 1.14
PSMA6-212ENST00000556167 DDX10Q13206 875 aaKnown RBP22.16■■□□□ 1.14
PSMA6-212ENST00000556167 ERBB3P21860 1342 aa22.15■■□□□ 1.14
PSMA6-212ENST00000556167 SPATA31A1Q5TZJ5 1347 aa22.15■■□□□ 1.14
PSMA6-212ENST00000556167 TNNT2P45379 298 aaPredicted RBP22.15■■□□□ 1.14
PSMA6-212ENST00000556167 LARP1Q6PKG0 1096 aaKnown RBP22.15■■□□□ 1.14
PSMA6-212ENST00000556167 TOM1L2Q6ZVM7 507 aa22.14■■□□□ 1.13
PSMA6-212ENST00000556167 THRAP3Q9Y2W1 955 aaKnown RBP22.14■■□□□ 1.13
PSMA6-212ENST00000556167 SMG6Q86US8 1419 aaKnown RBP22.14■■□□□ 1.13
PSMA6-212ENST00000556167 INSRP06213 1382 aa22.13■■□□□ 1.13
PSMA6-212ENST00000556167 WNK3Q9BYP7 1800 aa22.13■■□□□ 1.13
PSMA6-212ENST00000556167 ANKRD24Q8TF21 1146 aa22.13■■□□□ 1.13
PSMA6-212ENST00000556167 POLKQ9UBT6 870 aa22.13■■□□□ 1.13
PSMA6-212ENST00000556167 EMILIN1Q9Y6C2 1016 aa22.13■■□□□ 1.13
PSMA6-212ENST00000556167 PPM1GO15355 546 aaPredicted RBP22.11■■□□□ 1.13
PSMA6-212ENST00000556167 TCP11L2Q8N4U5 519 aa22.11■■□□□ 1.13
PSMA6-212ENST00000556167 CARD10Q9BWT7 1032 aa22.11■■□□□ 1.13
PSMA6-212ENST00000556167 RGPD2P0DJD1 1756 aa22.11■■□□□ 1.13
PSMA6-212ENST00000556167 RGS12O14924 1447 aa22.1■■□□□ 1.13
PSMA6-212ENST00000556167 ONECUT3O60422 494 aaPredicted RBP22.1■■□□□ 1.13
PSMA6-212ENST00000556167 BARGINQ6ZT62 677 aa22.09■■□□□ 1.13
PSMA6-212ENST00000556167 USP35Q9P2H5 1018 aa22.09■■□□□ 1.13
PSMA6-212ENST00000556167 BRWD3Q6RI45 1802 aa22.08■■□□□ 1.13
PSMA6-212ENST00000556167 THSD7AQ9UPZ6 1657 aa22.08■■□□□ 1.13
PSMA6-212ENST00000556167 HSP90AB2PQ58FF8 381 aa22.08■■□□□ 1.13
PSMA6-212ENST00000556167 ILDR2Q71H61 639 aa22.08■■□□□ 1.13
PSMA6-212ENST00000556167 LTV1Q96GA3 475 aaPredicted RBP22.08■■□□□ 1.13
PSMA6-212ENST00000556167 PARP4Q9UKK3 1724 aaKnown RBP22.07■■□□□ 1.12
PSMA6-212ENST00000556167 CNGB1Q14028 1251 aaPredicted RBP22.07■■□□□ 1.12
PSMA6-212ENST00000556167 FAM98CQ17RN3 349 aaKnown RBP22.07■■□□□ 1.12
PSMA6-212ENST00000556167 NLRP2Q9NX02 1062 aa22.07■■□□□ 1.12
PSMA6-212ENST00000556167 A0A0G2JS52 829 aa22.05■■□□□ 1.12
PSMA6-212ENST00000556167 MYT1Q01538 1121 aa22.05■■□□□ 1.12
PSMA6-212ENST00000556167 SEPT12Q8IYM1 358 aa22.05■■□□□ 1.12
PSMA6-212ENST00000556167 CDCA7Q9BWT1 371 aaPredicted RBP22.05■■□□□ 1.12
PSMA6-212ENST00000556167 PARD3Q8TEW0 1356 aa22.02■■□□□ 1.12
PSMA6-212ENST00000556167 MTHFSP49914 203 aa22.02■■□□□ 1.12
PSMA6-212ENST00000556167 RALBP1Q15311 655 aa22.01■■□□□ 1.11
PSMA6-212ENST00000556167 LRRC37A3O60309 1634 aa21.98■■□□□ 1.11
PSMA6-212ENST00000556167 DISP2A7MBM2 1401 aa21.98■■□□□ 1.11
PSMA6-212ENST00000556167 IL2RBP14784 551 aa21.98■■□□□ 1.11
PSMA6-212ENST00000556167 EIF4A2Q14240 407 aaKnown RBP21.98■■□□□ 1.11
PSMA6-212ENST00000556167 NBPF6Q5VWK0 638 aa21.98■■□□□ 1.11
PSMA6-212ENST00000556167 NBPF4Q96M43 638 aa21.98■■□□□ 1.11
PSMA6-212ENST00000556167 PPP2R1AP30153 589 aa21.97■■□□□ 1.11
PSMA6-212ENST00000556167 CFAP53Q96M91 514 aa21.97■■□□□ 1.11
PSMA6-212ENST00000556167 KRT27Q7Z3Y8 459 aa21.96■■□□□ 1.11
PSMA6-212ENST00000556167 NCAPD2Q15021 1401 aa21.96■■□□□ 1.11
PSMA6-212ENST00000556167 PDE3BQ13370 1112 aa21.95■■□□□ 1.1
PSMA6-212ENST00000556167 DDB1Q16531 1140 aa21.95■■□□□ 1.1
PSMA6-212ENST00000556167 RGPD1P0DJD0 1748 aa21.94■■□□□ 1.1
PSMA6-212ENST00000556167 EYA1Q99502 592 aa21.94■■□□□ 1.1
PSMA6-212ENST00000556167 EXOC5O00471 708 aa21.93■■□□□ 1.1
PSMA6-212ENST00000556167 DIAPH1O60610 1272 aaKnown RBP21.93■■□□□ 1.1
PSMA6-212ENST00000556167 RAPGEF4Q8WZA2 1011 aa21.93■■□□□ 1.1
PSMA6-212ENST00000556167 TNS2Q63HR2 1409 aa21.92■■□□□ 1.1
PSMA6-212ENST00000556167 IGSF1Q8N6C5 1336 aa21.92■■□□□ 1.1
PSMA6-212ENST00000556167 IL13P35225 146 aa21.92■■□□□ 1.1
PSMA6-212ENST00000556167 COL3A1P02461 1466 aaPredicted RBP21.91■■□□□ 1.1
PSMA6-212ENST00000556167 PLEKHG2Q9H7P9 1386 aa21.91■■□□□ 1.1
PSMA6-212ENST00000556167 USHBP1Q8N6Y0 703 aa21.91■■□□□ 1.1
PSMA6-212ENST00000556167 MYBBP1AQ9BQG0 1328 aaKnown RBP21.9■■□□□ 1.1
PSMA6-212ENST00000556167 TATP17735 454 aaPredicted RBP21.9■■□□□ 1.1
PSMA6-212ENST00000556167 PRKRIP1Q9H875 184 aaPredicted RBP21.9■■□□□ 1.1
PSMA6-212ENST00000556167 OVOS2A0A0G2JMS6 1433 aa21.89■■□□□ 1.1
PSMA6-212ENST00000556167 MEGF6O75095 1541 aa21.89■■□□□ 1.09
PSMA6-212ENST00000556167 PKD1L3Q7Z443 1732 aa21.89■■□□□ 1.09
PSMA6-212ENST00000556167 NUDCQ9Y266 331 aa21.88■■□□□ 1.09
PSMA6-212ENST00000556167 SHANK3Q9BYB0 1731 aa21.88■■□□□ 1.09
PSMA6-212ENST00000556167 KAT6BQ8WYB5 2073 aa21.87■■□□□ 1.09
PSMA6-212ENST00000556167 SBF2Q86WG5 1849 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms