RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 ZBTB7CA1YPR0 619 aa12.83□□□□□ -0.36
HNRNPC-220ENST00000555585 U2AF1L5P0DN76 240 aaPredicted RBP12.83□□□□□ -0.36
HNRNPC-220ENST00000555585 AMPHP49418 695 aa12.83□□□□□ -0.36
HNRNPC-220ENST00000555585 U2AF1Q01081 240 aaKnown RBP eCLIP12.83□□□□□ -0.36
HNRNPC-220ENST00000555585 CCDC146Q8IYE0 955 aa12.83□□□□□ -0.36
HNRNPC-220ENST00000555585 KCNH5Q8NCM2 988 aa12.83□□□□□ -0.36
HNRNPC-220ENST00000555585 NHSL1Q5SYE7 1610 aa12.83□□□□□ -0.36
HNRNPC-220ENST00000555585 PEAK1Q9H792 1746 aa12.82□□□□□ -0.36
HNRNPC-220ENST00000555585 LTN1O94822 1766 aa12.82□□□□□ -0.36
HNRNPC-220ENST00000555585 ROBO1Q9Y6N7 1651 aa12.82□□□□□ -0.36
HNRNPC-220ENST00000555585 MAP3K19Q56UN5 1328 aa12.82□□□□□ -0.36
HNRNPC-220ENST00000555585 SPATA31A3Q5VYP0 1347 aa12.82□□□□□ -0.36
HNRNPC-220ENST00000555585 ATXN8OSP0DMR3 200 aa12.81□□□□□ -0.36
HNRNPC-220ENST00000555585 SALL2Q9Y467 1007 aaPredicted RBP12.81□□□□□ -0.36
HNRNPC-220ENST00000555585 SLIT3O75094 1523 aa12.81□□□□□ -0.36
HNRNPC-220ENST00000555585 USP19O94966 1318 aa12.81□□□□□ -0.36
HNRNPC-220ENST00000555585 SOS2Q07890 1332 aaPredicted RBP12.81□□□□□ -0.36
HNRNPC-220ENST00000555585 ZBED9Q6R2W3 1325 aa12.81□□□□□ -0.36
HNRNPC-220ENST00000555585 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
HNRNPC-220ENST00000555585 NFAT5O94916 1531 aa12.8□□□□□ -0.36
HNRNPC-220ENST00000555585 TOM1O60784 492 aa12.8□□□□□ -0.36
HNRNPC-220ENST00000555585 GCP02774 474 aa12.8□□□□□ -0.36
HNRNPC-220ENST00000555585 FLT4P35916 1363 aa12.8□□□□□ -0.36
HNRNPC-220ENST00000555585 IL13P35225 146 aa12.79□□□□□ -0.36
HNRNPC-220ENST00000555585 HSP90AB2PQ58FF8 381 aa12.79□□□□□ -0.36
HNRNPC-220ENST00000555585 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
HNRNPC-220ENST00000555585 PHRF1Q9P1Y6 1649 aaKnown RBP12.79□□□□□ -0.36
HNRNPC-220ENST00000555585 KIF24Q5T7B8 1368 aa12.79□□□□□ -0.36
HNRNPC-220ENST00000555585 MED1Q15648 1581 aaPredicted RBP12.78□□□□□ -0.36
HNRNPC-220ENST00000555585 HOXC9P31274 260 aa12.78□□□□□ -0.36
HNRNPC-220ENST00000555585 EIF4A2Q14240 407 aaKnown RBP12.78□□□□□ -0.36
HNRNPC-220ENST00000555585 PNNQ9H307 717 aaKnown RBP12.78□□□□□ -0.36
HNRNPC-220ENST00000555585 UBAP1LF5GYI3 381 aa12.77□□□□□ -0.37
HNRNPC-220ENST00000555585 APAF1O14727 1248 aa12.77□□□□□ -0.37
HNRNPC-220ENST00000555585 PIP4K2BP78356 416 aa12.77□□□□□ -0.37
HNRNPC-220ENST00000555585 CABLES1Q8TDN4 633 aa12.77□□□□□ -0.37
HNRNPC-220ENST00000555585 RTL1A6NKG5 1358 aa12.77□□□□□ -0.37
HNRNPC-220ENST00000555585 NEFMP07197 916 aa12.76□□□□□ -0.37
HNRNPC-220ENST00000555585 HMOX1P09601 288 aa12.76□□□□□ -0.37
HNRNPC-220ENST00000555585 HAP1P54257 671 aaPredicted RBP12.76□□□□□ -0.37
HNRNPC-220ENST00000555585 ZC3H6P61129 1189 aaKnown RBP12.76□□□□□ -0.37
HNRNPC-220ENST00000555585 IP6K1Q92551 441 aa12.76□□□□□ -0.37
HNRNPC-220ENST00000555585 MAPK8IP3Q9UPT6 1336 aa12.76□□□□□ -0.37
HNRNPC-220ENST00000555585 AHDC1Q5TGY3 1603 aaPredicted RBP12.76□□□□□ -0.37
HNRNPC-220ENST00000555585 CRYBG1Q9Y4K1 1723 aa12.76□□□□□ -0.37
HNRNPC-220ENST00000555585 PHLPP1O60346 1717 aa12.75□□□□□ -0.37
HNRNPC-220ENST00000555585 FCHSD2O94868 740 aa12.75□□□□□ -0.37
HNRNPC-220ENST00000555585 IQSEC2Q5JU85 1478 aa12.75□□□□□ -0.37
HNRNPC-220ENST00000555585 ARHGEF25Q86VW2 580 aa12.75□□□□□ -0.37
HNRNPC-220ENST00000555585 CERKQ8TCT0 537 aa12.75□□□□□ -0.37
HNRNPC-220ENST00000555585 LTV1Q96GA3 475 aaPredicted RBP12.75□□□□□ -0.37
HNRNPC-220ENST00000555585 LRRC59Q96AG4 307 aaKnown RBP12.74□□□□□ -0.37
HNRNPC-220ENST00000555585 PRKAR2BP31323 418 aa12.73□□□□□ -0.37
HNRNPC-220ENST00000555585 NEUROD2Q15784 382 aa12.73□□□□□ -0.37
HNRNPC-220ENST00000555585 TCP11L2Q8N4U5 519 aa12.73□□□□□ -0.37
HNRNPC-220ENST00000555585 RSPH6AQ9H0K4 717 aa12.73□□□□□ -0.37
HNRNPC-220ENST00000555585 RGPD1P0DJD0 1748 aa12.73□□□□□ -0.37
HNRNPC-220ENST00000555585 RGPD5Q99666 1765 aa12.72□□□□□ -0.37
HNRNPC-220ENST00000555585 ABCA3Q99758 1704 aa12.72□□□□□ -0.37
HNRNPC-220ENST00000555585 SULT6B1Q6IMI4 303 aa12.72□□□□□ -0.37
HNRNPC-220ENST00000555585 NGEFQ8N5V2 710 aa12.72□□□□□ -0.37
HNRNPC-220ENST00000555585 PLEKHF1Q96S99 279 aa12.72□□□□□ -0.37
HNRNPC-220ENST00000555585 RRP7AQ9Y3A4 280 aaKnown RBP12.72□□□□□ -0.37
HNRNPC-220ENST00000555585 EYA1Q99502 592 aa12.71□□□□□ -0.37
HNRNPC-220ENST00000555585 PDE3BQ13370 1112 aa12.7□□□□□ -0.38
HNRNPC-220ENST00000555585 AEBP1Q8IUX7 1158 aa12.7□□□□□ -0.38
HNRNPC-220ENST00000555585 ANKRD24Q8TF21 1146 aa12.7□□□□□ -0.38
HNRNPC-220ENST00000555585 COL16A1Q07092 1604 aaPredicted RBP12.7□□□□□ -0.38
HNRNPC-220ENST00000555585 KIAA0232Q92628 1395 aa12.69□□□□□ -0.38
HNRNPC-220ENST00000555585 RGPD2P0DJD1 1756 aa12.69□□□□□ -0.38
HNRNPC-220ENST00000555585 IGSF1Q8N6C5 1336 aa12.69□□□□□ -0.38
HNRNPC-220ENST00000555585 TMPOP42166 694 aaKnown RBP12.69□□□□□ -0.38
HNRNPC-220ENST00000555585 CHRNA2Q15822 529 aa12.69□□□□□ -0.38
HNRNPC-220ENST00000555585 COL18A1P39060 1754 aa12.69□□□□□ -0.38
HNRNPC-220ENST00000555585 CPDO75976 1380 aa12.69□□□□□ -0.38
HNRNPC-220ENST00000555585 PRDM11Q9NQV5 511 aa12.68□□□□□ -0.38
HNRNPC-220ENST00000555585 AXIN2Q9Y2T1 843 aa12.68□□□□□ -0.38
HNRNPC-220ENST00000555585 COL22A1Q8NFW1 1626 aaPredicted RBP12.68□□□□□ -0.38
HNRNPC-220ENST00000555585 RIPK4P57078 832 aa12.67□□□□□ -0.38
HNRNPC-220ENST00000555585 GOLGA2Q08379 1002 aa12.67□□□□□ -0.38
HNRNPC-220ENST00000555585 NFE2L2Q16236 605 aa12.67□□□□□ -0.38
HNRNPC-220ENST00000555585 USHBP1Q8N6Y0 703 aa12.67□□□□□ -0.38
HNRNPC-220ENST00000555585 CDCA7LQ96GN5 454 aa12.67□□□□□ -0.38
HNRNPC-220ENST00000555585 PHACTR3Q96KR7 559 aa12.67□□□□□ -0.38
HNRNPC-220ENST00000555585 ABCC6O95255 1503 aa12.67□□□□□ -0.38
HNRNPC-220ENST00000555585 CSB-PGBD3P0DP91 1061 aa12.66□□□□□ -0.38
HNRNPC-220ENST00000555585 NBPF6Q5VWK0 638 aa12.66□□□□□ -0.38
HNRNPC-220ENST00000555585 WWC1Q8IX03 1113 aa12.66□□□□□ -0.38
HNRNPC-220ENST00000555585 NBPF4Q96M43 638 aa12.66□□□□□ -0.38
HNRNPC-220ENST00000555585 ZNF521Q96K83 1311 aa12.65□□□□□ -0.38
HNRNPC-220ENST00000555585 CCDC27Q2M243 656 aa12.65□□□□□ -0.38
HNRNPC-220ENST00000555585 KDRP35968 1356 aa12.65□□□□□ -0.38
HNRNPC-220ENST00000555585 ERBB3P21860 1342 aa12.64□□□□□ -0.39
HNRNPC-220ENST00000555585 DLG5Q8TDM6 1919 aa12.64□□□□□ -0.39
HNRNPC-220ENST00000555585 FAM208AQ9UK61 1670 aaKnown RBP12.64□□□□□ -0.39
HNRNPC-220ENST00000555585 AKT1S1Q96B36 256 aa12.64□□□□□ -0.39
HNRNPC-220ENST00000555585 NLRP2Q9NX02 1062 aa12.64□□□□□ -0.39
HNRNPC-220ENST00000555585 LMOD3Q0VAK6 560 aa12.63□□□□□ -0.39
HNRNPC-220ENST00000555585 WDR63Q8IWG1 891 aa12.63□□□□□ -0.39
HNRNPC-220ENST00000555585 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms