RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 USP31Q70CQ4 1352 aa19.44■□□□□ 0.7
PCNX4-209ENST00000555569 EDC4Q6P2E9 1401 aaKnown RBP19.44■□□□□ 0.7
PCNX4-209ENST00000555569 PDE3BQ13370 1112 aa19.44■□□□□ 0.7
PCNX4-209ENST00000555569 FAM196AQ6ZSG2 479 aa19.44■□□□□ 0.7
PCNX4-209ENST00000555569 NME9Q86XW9 330 aa19.44■□□□□ 0.7
PCNX4-209ENST00000555569 PCGF6Q9BYE7 350 aa19.44■□□□□ 0.7
PCNX4-209ENST00000555569 AXIN2Q9Y2T1 843 aa19.44■□□□□ 0.7
PCNX4-209ENST00000555569 TNS1Q9HBL0 1735 aaKnown RBP19.44■□□□□ 0.7
PCNX4-209ENST00000555569 CLSPNQ9HAW4 1339 aa19.44■□□□□ 0.7
PCNX4-209ENST00000555569 A0A1W2PP64 1363 aa19.44■□□□□ 0.7
PCNX4-209ENST00000555569 TOM1L2Q6ZVM7 507 aa19.43■□□□□ 0.7
PCNX4-209ENST00000555569 USP47Q96K76 1375 aa19.43■□□□□ 0.7
PCNX4-209ENST00000555569 NINLQ9Y2I6 1382 aa19.43■□□□□ 0.7
PCNX4-209ENST00000555569 TIMELESSQ9UNS1 1208 aa19.42■□□□□ 0.7
PCNX4-209ENST00000555569 WDR17Q8IZU2 1322 aa19.42■□□□□ 0.7
PCNX4-209ENST00000555569 WNK3Q9BYP7 1800 aa19.41■□□□□ 0.7
PCNX4-209ENST00000555569 ABCC6O95255 1503 aa19.41■□□□□ 0.7
PCNX4-209ENST00000555569 DISP2A7MBM2 1401 aa19.4■□□□□ 0.7
PCNX4-209ENST00000555569 LTN1O94822 1766 aa19.39■□□□□ 0.7
PCNX4-209ENST00000555569 TRIM37O94972 964 aa19.39■□□□□ 0.69
PCNX4-209ENST00000555569 EN1Q05925 392 aaPredicted RBP19.39■□□□□ 0.69
PCNX4-209ENST00000555569 LRRC37A3O60309 1634 aa19.38■□□□□ 0.69
PCNX4-209ENST00000555569 CSB-PGBD3P0DP91 1061 aa19.38■□□□□ 0.69
PCNX4-209ENST00000555569 TMF1P82094 1093 aa19.38■□□□□ 0.69
PCNX4-209ENST00000555569 OVOS2A0A0J9YW53 1432 aa19.36■□□□□ 0.69
PCNX4-209ENST00000555569 OVOS2Q6IE36 1432 aa19.36■□□□□ 0.69
PCNX4-209ENST00000555569 CARD10Q9BWT7 1032 aa19.36■□□□□ 0.69
PCNX4-209ENST00000555569 DDB1Q16531 1140 aa19.35■□□□□ 0.69
PCNX4-209ENST00000555569 ANKRD36BQ8N2N9 1353 aa19.34■□□□□ 0.69
PCNX4-209ENST00000555569 C11orf95C9JLR9 678 aaPredicted RBP19.34■□□□□ 0.69
PCNX4-209ENST00000555569 CDCA7Q9BWT1 371 aaPredicted RBP19.34■□□□□ 0.69
PCNX4-209ENST00000555569 PEAK1Q9H792 1746 aa19.34■□□□□ 0.69
PCNX4-209ENST00000555569 APBA3O96018 575 aa19.33■□□□□ 0.68
PCNX4-209ENST00000555569 OVOS2A0A0G2JMS6 1433 aa19.33■□□□□ 0.68
PCNX4-209ENST00000555569 CCDC7Q96M83 1385 aa19.32■□□□□ 0.68
PCNX4-209ENST00000555569 SBF2Q86WG5 1849 aa19.32■□□□□ 0.68
PCNX4-209ENST00000555569 EZH2Q15910 746 aaKnown RBP19.32■□□□□ 0.68
PCNX4-209ENST00000555569 CDCA8Q53HL2 280 aa19.32■□□□□ 0.68
PCNX4-209ENST00000555569 CAMKK2Q96RR4 588 aa19.32■□□□□ 0.68
PCNX4-209ENST00000555569 ERBB3P21860 1342 aa19.31■□□□□ 0.68
PCNX4-209ENST00000555569 PARD3Q8TEW0 1356 aa19.31■□□□□ 0.68
PCNX4-209ENST00000555569 COG3Q96JB2 828 aa19.3■□□□□ 0.68
PCNX4-209ENST00000555569 PSDA5PKW4 1024 aaPredicted RBP19.29■□□□□ 0.68
PCNX4-209ENST00000555569 RREB1Q92766 1687 aa19.29■□□□□ 0.68
PCNX4-209ENST00000555569 SRCAPQ6ZRS2 3230 aa19.28■□□□□ 0.68
PCNX4-209ENST00000555569 CCER1Q8TC90 406 aaPredicted RBP19.28■□□□□ 0.68
PCNX4-209ENST00000555569 ANKRD24Q8TF21 1146 aa19.28■□□□□ 0.68
PCNX4-209ENST00000555569 NLRP2Q9NX02 1062 aa19.28■□□□□ 0.68
PCNX4-209ENST00000555569 EXOC5O00471 708 aa19.27■□□□□ 0.68
PCNX4-209ENST00000555569 MARCH10Q8NA82 808 aaPredicted RBP19.27■□□□□ 0.68
PCNX4-209ENST00000555569 IP6K1Q92551 441 aa19.27■□□□□ 0.68
PCNX4-209ENST00000555569 MYOM1P52179 1685 aa19.27■□□□□ 0.67
PCNX4-209ENST00000555569 FAM208AQ9UK61 1670 aaKnown RBP19.26■□□□□ 0.67
PCNX4-209ENST00000555569 NUP188Q5SRE5 1749 aa19.25■□□□□ 0.67
PCNX4-209ENST00000555569 KIF20BQ96Q89 1820 aa19.25■□□□□ 0.67
PCNX4-209ENST00000555569 BCL9O00512 1426 aa19.25■□□□□ 0.67
PCNX4-209ENST00000555569 TNS2Q63HR2 1409 aa19.25■□□□□ 0.67
PCNX4-209ENST00000555569 FYB1O15117 783 aa19.24■□□□□ 0.67
PCNX4-209ENST00000555569 R3HDM1Q15032 1099 aaKnown RBP19.24■□□□□ 0.67
PCNX4-209ENST00000555569 MAP3K19Q56UN5 1328 aa19.24■□□□□ 0.67
PCNX4-209ENST00000555569 LRP5O75197 1615 aa19.23■□□□□ 0.67
PCNX4-209ENST00000555569 GGNBP2Q9H3C7 697 aa19.23■□□□□ 0.67
PCNX4-209ENST00000555569 RGPD3A6NKT7 1758 aaPredicted RBP19.23■□□□□ 0.67
PCNX4-209ENST00000555569 RGPD4Q7Z3J3 1758 aa19.23■□□□□ 0.67
PCNX4-209ENST00000555569 IL2RBP14784 551 aa19.22■□□□□ 0.67
PCNX4-209ENST00000555569 FBLN1P23142 703 aa19.22■□□□□ 0.67
PCNX4-209ENST00000555569 AMPHP49418 695 aa19.22■□□□□ 0.67
PCNX4-209ENST00000555569 LTV1Q96GA3 475 aaPredicted RBP19.22■□□□□ 0.67
PCNX4-209ENST00000555569 BCL11BQ9C0K0 894 aaPredicted RBP19.22■□□□□ 0.67
PCNX4-209ENST00000555569 HOXC9P31274 260 aa19.21■□□□□ 0.67
PCNX4-209ENST00000555569 PLSCR1O15162 318 aa19.2■□□□□ 0.66
PCNX4-209ENST00000555569 KAT6BQ8WYB5 2073 aa19.2■□□□□ 0.66
PCNX4-209ENST00000555569 RGPD2P0DJD1 1756 aa19.19■□□□□ 0.66
PCNX4-209ENST00000555569 PTF1AQ7RTS3 328 aa19.19■□□□□ 0.66
PCNX4-209ENST00000555569 CARD14Q9BXL6 1004 aa19.19■□□□□ 0.66
PCNX4-209ENST00000555569 RTL1A6NKG5 1358 aa19.19■□□□□ 0.66
PCNX4-209ENST00000555569 NSD3Q9BZ95 1437 aa19.18■□□□□ 0.66
PCNX4-209ENST00000555569 RRS1Q15050 365 aaKnown RBP19.18■□□□□ 0.66
PCNX4-209ENST00000555569 NBPF14Q5TI25 921 aa19.18■□□□□ 0.66
PCNX4-209ENST00000555569 EIF4G2P78344 907 aaKnown RBP eCLIP19.17■□□□□ 0.66
PCNX4-209ENST00000555569 NHSQ6T4R5 1651 aa19.16■□□□□ 0.66
PCNX4-209ENST00000555569 HSPA5P11021 654 aaKnown RBP19.15■□□□□ 0.66
PCNX4-209ENST00000555569 POLR3GLQ9BT43 218 aa19.15■□□□□ 0.66
PCNX4-209ENST00000555569 KCNQ2O43526 872 aa19.13■□□□□ 0.65
PCNX4-209ENST00000555569 ACSBG1Q96GR2 724 aa19.13■□□□□ 0.65
PCNX4-209ENST00000555569 SMG6Q86US8 1419 aaKnown RBP19.12■□□□□ 0.65
PCNX4-209ENST00000555569 INSRP06213 1382 aa19.11■□□□□ 0.65
PCNX4-209ENST00000555569 FLT4P35916 1363 aa19.11■□□□□ 0.65
PCNX4-209ENST00000555569 KIF24Q5T7B8 1368 aa19.11■□□□□ 0.65
PCNX4-209ENST00000555569 CGNL1Q0VF96 1302 aa19.1■□□□□ 0.65
PCNX4-209ENST00000555569 BTAF1O14981 1849 aa19.1■□□□□ 0.65
PCNX4-209ENST00000555569 PROM2Q8N271 834 aa19.1■□□□□ 0.65
PCNX4-209ENST00000555569 DDX54Q8TDD1 881 aaKnown RBP19.1■□□□□ 0.65
PCNX4-209ENST00000555569 MAP2P11137 1827 aaKnown RBP19.09■□□□□ 0.65
PCNX4-209ENST00000555569 SHANK3Q9BYB0 1731 aa19.09■□□□□ 0.65
PCNX4-209ENST00000555569 TXNRD1Q16881 649 aa19.09■□□□□ 0.65
PCNX4-209ENST00000555569 HSP90AB2PQ58FF8 381 aa19.09■□□□□ 0.65
PCNX4-209ENST00000555569 NBPF6Q5VWK0 638 aa19.09■□□□□ 0.65
PCNX4-209ENST00000555569 NBPF4Q96M43 638 aa19.09■□□□□ 0.65
PCNX4-209ENST00000555569 MEGF6O75095 1541 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms