RNA–Protein interactions for RNA: ENST00000555412.1

SRSF5-210, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-210ENST00000555412 HOXC9P31274 260 aa18.68■□□□□ 0.58
SRSF5-210ENST00000555412 AXIN2Q9Y2T1 843 aa18.68■□□□□ 0.58
SRSF5-210ENST00000555412 EMILIN1Q9Y6C2 1016 aa18.68■□□□□ 0.58
SRSF5-210ENST00000555412 CAMTA1Q9Y6Y1 1673 aa18.68■□□□□ 0.58
SRSF5-210ENST00000555412 AFF2P51816 1311 aa18.68■□□□□ 0.58
SRSF5-210ENST00000555412 RTL1A6NKG5 1358 aa18.68■□□□□ 0.58
SRSF5-210ENST00000555412 PRKRIP1Q9H875 184 aaPredicted RBP18.67■□□□□ 0.58
SRSF5-210ENST00000555412 PPM1GO15355 546 aaPredicted RBP18.66■□□□□ 0.58
SRSF5-210ENST00000555412 PPP2R1AP30153 589 aa18.66■□□□□ 0.58
SRSF5-210ENST00000555412 MTHFSP49914 203 aa18.66■□□□□ 0.58
SRSF5-210ENST00000555412 UNC5CLQ8IV45 518 aa18.66■□□□□ 0.58
SRSF5-210ENST00000555412 USP21Q9UK80 565 aa18.66■□□□□ 0.58
SRSF5-210ENST00000555412 FLT4P35916 1363 aa18.66■□□□□ 0.58
SRSF5-210ENST00000555412 PEAK1Q9H792 1746 aa18.66■□□□□ 0.58
SRSF5-210ENST00000555412 BLMP54132 1417 aaPredicted RBP18.66■□□□□ 0.58
SRSF5-210ENST00000555412 SMG6Q86US8 1419 aaKnown RBP18.66■□□□□ 0.58
SRSF5-210ENST00000555412 BCL9LQ86UU0 1499 aa18.65■□□□□ 0.58
SRSF5-210ENST00000555412 EVA1CP58658 441 aa18.65■□□□□ 0.58
SRSF5-210ENST00000555412 ANP32CO43423 234 aa18.64■□□□□ 0.57
SRSF5-210ENST00000555412 HSP90AB2PQ58FF8 381 aa18.64■□□□□ 0.57
SRSF5-210ENST00000555412 ZNF772Q68DY9 489 aaPredicted RBP18.64■□□□□ 0.57
SRSF5-210ENST00000555412 INSRP06213 1382 aa18.64■□□□□ 0.57
SRSF5-210ENST00000555412 NRAPQ86VF7 1730 aa18.63■□□□□ 0.57
SRSF5-210ENST00000555412 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.63■□□□□ 0.57
SRSF5-210ENST00000555412 PHF23Q9BUL5 403 aaPredicted RBP18.62■□□□□ 0.57
SRSF5-210ENST00000555412 COL5A2P05997 1499 aaPredicted RBP18.62■□□□□ 0.57
SRSF5-210ENST00000555412 CDK12Q9NYV4 1490 aaPredicted RBP18.61■□□□□ 0.57
SRSF5-210ENST00000555412 MYBBP1AQ9BQG0 1328 aaKnown RBP18.61■□□□□ 0.57
SRSF5-210ENST00000555412 VPS72Q15906 364 aa18.61■□□□□ 0.57
SRSF5-210ENST00000555412 ANKRD24Q8TF21 1146 aa18.61■□□□□ 0.57
SRSF5-210ENST00000555412 STRN4Q9NRL3 753 aa18.61■□□□□ 0.57
SRSF5-210ENST00000555412 RGS17Q9UGC6 210 aaPredicted RBP18.61■□□□□ 0.57
SRSF5-210ENST00000555412 ERBB3P21860 1342 aa18.6■□□□□ 0.57
SRSF5-210ENST00000555412 WDR17Q8IZU2 1322 aa18.6■□□□□ 0.57
SRSF5-210ENST00000555412 QTRT2Q9H974 415 aaKnown RBP18.6■□□□□ 0.57
SRSF5-210ENST00000555412 TRPC5Q9UL62 973 aaPredicted RBP18.6■□□□□ 0.57
SRSF5-210ENST00000555412 DIEXFQ68CQ4 756 aaKnown RBP18.59■□□□□ 0.57
SRSF5-210ENST00000555412 LARP1Q6PKG0 1096 aaKnown RBP18.59■□□□□ 0.57
SRSF5-210ENST00000555412 CSB-PGBD3P0DP91 1061 aa18.58■□□□□ 0.56
SRSF5-210ENST00000555412 LTV1Q96GA3 475 aaPredicted RBP18.58■□□□□ 0.56
SRSF5-210ENST00000555412 CFAP53Q96M91 514 aa18.58■□□□□ 0.56
SRSF5-210ENST00000555412 ATRNO75882 1429 aa18.57■□□□□ 0.56
SRSF5-210ENST00000555412 TOM1L2Q6ZVM7 507 aa18.57■□□□□ 0.56
SRSF5-210ENST00000555412 FAM208AQ9UK61 1670 aaKnown RBP18.57■□□□□ 0.56
SRSF5-210ENST00000555412 SPATA31A5Q5VU36 1347 aa18.56■□□□□ 0.56
SRSF5-210ENST00000555412 SPATA31A7Q8IWB4 1347 aa18.56■□□□□ 0.56
SRSF5-210ENST00000555412 EIF4A2Q14240 407 aaKnown RBP18.56■□□□□ 0.56
SRSF5-210ENST00000555412 GJD4Q96KN9 370 aaPredicted RBP18.56■□□□□ 0.56
SRSF5-210ENST00000555412 CARD10Q9BWT7 1032 aa18.56■□□□□ 0.56
SRSF5-210ENST00000555412 CRB1P82279 1406 aa18.56■□□□□ 0.56
SRSF5-210ENST00000555412 SPATA31A1Q5TZJ5 1347 aa18.55■□□□□ 0.56
SRSF5-210ENST00000555412 DIAPH1O60610 1272 aaKnown RBP18.55■□□□□ 0.56
SRSF5-210ENST00000555412 NLRP2Q9NX02 1062 aa18.55■□□□□ 0.56
SRSF5-210ENST00000555412 CCDC9Q9Y3X0 531 aaKnown RBP18.55■□□□□ 0.56
SRSF5-210ENST00000555412 RGPD2P0DJD1 1756 aa18.55■□□□□ 0.56
SRSF5-210ENST00000555412 IL13P35225 146 aa18.54■□□□□ 0.56
SRSF5-210ENST00000555412 RBM6P78332 1123 aaKnown RBP18.53■□□□□ 0.56
SRSF5-210ENST00000555412 NBPF6Q5VWK0 638 aa18.53■□□□□ 0.56
SRSF5-210ENST00000555412 POTEAQ6S8J7 498 aa18.53■□□□□ 0.56
SRSF5-210ENST00000555412 NBPF4Q96M43 638 aa18.53■□□□□ 0.56
SRSF5-210ENST00000555412 THRAP3Q9Y2W1 955 aaKnown RBP18.53■□□□□ 0.56
SRSF5-210ENST00000555412 COL3A1P02461 1466 aaPredicted RBP18.52■□□□□ 0.56
SRSF5-210ENST00000555412 TCP11L2Q8N4U5 519 aa18.52■□□□□ 0.56
SRSF5-210ENST00000555412 EYA1Q99502 592 aa18.52■□□□□ 0.56
SRSF5-210ENST00000555412 NUDCQ9Y266 331 aa18.51■□□□□ 0.55
SRSF5-210ENST00000555412 ONECUT3O60422 494 aaPredicted RBP18.5■□□□□ 0.55
SRSF5-210ENST00000555412 RXRBP28702 533 aa18.5■□□□□ 0.55
SRSF5-210ENST00000555412 BARGINQ6ZT62 677 aa18.5■□□□□ 0.55
SRSF5-210ENST00000555412 USP35Q9P2H5 1018 aa18.5■□□□□ 0.55
SRSF5-210ENST00000555412 GLI3P10071 1580 aa18.49■□□□□ 0.55
SRSF5-210ENST00000555412 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
SRSF5-210ENST00000555412 RGPD1P0DJD0 1748 aa18.48■□□□□ 0.55
SRSF5-210ENST00000555412 NCAPD2Q15021 1401 aa18.48■□□□□ 0.55
SRSF5-210ENST00000555412 CDCA7Q9BWT1 371 aaPredicted RBP18.47■□□□□ 0.55
SRSF5-210ENST00000555412 FAM98CQ17RN3 349 aaKnown RBP18.46■□□□□ 0.55
SRSF5-210ENST00000555412 USHBP1Q8N6Y0 703 aa18.46■□□□□ 0.55
SRSF5-210ENST00000555412 U2SURPO15042 1029 aaKnown RBP18.45■□□□□ 0.54
SRSF5-210ENST00000555412 IL2RBP14784 551 aa18.45■□□□□ 0.54
SRSF5-210ENST00000555412 CCDC184Q52MB2 194 aa18.44■□□□□ 0.54
SRSF5-210ENST00000555412 SULT6B1Q6IMI4 303 aa18.44■□□□□ 0.54
SRSF5-210ENST00000555412 KDRP35968 1356 aa18.43■□□□□ 0.54
SRSF5-210ENST00000555412 DISP2A7MBM2 1401 aa18.43■□□□□ 0.54
SRSF5-210ENST00000555412 RAPGEF4Q8WZA2 1011 aa18.43■□□□□ 0.54
SRSF5-210ENST00000555412 WNK3Q9BYP7 1800 aa18.43■□□□□ 0.54
SRSF5-210ENST00000555412 CCER2I3L3R5 266 aa18.42■□□□□ 0.54
SRSF5-210ENST00000555412 U2AF1L5P0DN76 240 aaPredicted RBP18.42■□□□□ 0.54
SRSF5-210ENST00000555412 U2AF1Q01081 240 aaKnown RBP eCLIP18.42■□□□□ 0.54
SRSF5-210ENST00000555412 MIER1Q8N108 512 aa18.42■□□□□ 0.54
SRSF5-210ENST00000555412 MRS2Q9HD23 443 aa18.42■□□□□ 0.54
SRSF5-210ENST00000555412 FCHSD2O94868 740 aa18.41■□□□□ 0.54
SRSF5-210ENST00000555412 HMOX1P09601 288 aa18.41■□□□□ 0.54
SRSF5-210ENST00000555412 TATP17735 454 aaPredicted RBP18.41■□□□□ 0.54
SRSF5-210ENST00000555412 AEBP1Q8IUX7 1158 aa18.41■□□□□ 0.54
SRSF5-210ENST00000555412 SEPT12Q8IYM1 358 aa18.41■□□□□ 0.54
SRSF5-210ENST00000555412 THSD7AQ9UPZ6 1657 aa18.41■□□□□ 0.54
SRSF5-210ENST00000555412 PARP4Q9UKK3 1724 aaKnown RBP18.4■□□□□ 0.54
SRSF5-210ENST00000555412 EXOC5O00471 708 aa18.4■□□□□ 0.54
SRSF5-210ENST00000555412 PLEKHG2Q9H7P9 1386 aa18.4■□□□□ 0.54
SRSF5-210ENST00000555412 WDR43Q15061 677 aaKnown RBP eCLIP18.39■□□□□ 0.53
SRSF5-210ENST00000555412 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.39■□□□□ 0.535e-29■■■□□ 14.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms