RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 MRPL50Q8N5N7 158 aaKnown RBP14.66□□□□□ -0.06
XRCC3-208ENST00000554811 NGDNQ8NEJ9 315 aaKnown RBP14.66□□□□□ -0.06
XRCC3-208ENST00000554811 FOXO3O43524 673 aa14.66□□□□□ -0.06
XRCC3-208ENST00000554811 K7ELQ4 463 aaPredicted RBP14.65□□□□□ -0.06
XRCC3-208ENST00000554811 ZBTB7BO15156 539 aaPredicted RBP14.65□□□□□ -0.06
XRCC3-208ENST00000554811 TSPYL4Q9UJ04 414 aa14.65□□□□□ -0.06
XRCC3-208ENST00000554811 MAP4K4O95819 1239 aaPredicted RBP14.65□□□□□ -0.06
XRCC3-208ENST00000554811 HSP90AB2PQ58FF8 381 aa14.65□□□□□ -0.06
XRCC3-208ENST00000554811 RBM33Q96EV2 1170 aaKnown RBP14.65□□□□□ -0.06
XRCC3-208ENST00000554811 MYOM2P54296 1465 aa14.65□□□□□ -0.06
XRCC3-208ENST00000554811 MEIS3Q99687 375 aa14.65□□□□□ -0.06
XRCC3-208ENST00000554811 FKBP5Q13451 457 aaPredicted RBP14.64□□□□□ -0.07
XRCC3-208ENST00000554811 GCC1Q96CN9 775 aa14.64□□□□□ -0.07
XRCC3-208ENST00000554811 EFCAB6Q5THR3 1501 aa14.64□□□□□ -0.07
XRCC3-208ENST00000554811 SBNO2Q9Y2G9 1366 aa14.64□□□□□ -0.07
XRCC3-208ENST00000554811 A0A0U1RQG5 324 aaPredicted RBP14.64□□□□□ -0.07
XRCC3-208ENST00000554811 EIF2S2P20042 333 aaKnown RBP14.64□□□□□ -0.07
XRCC3-208ENST00000554811 LMOD3Q0VAK6 560 aa14.64□□□□□ -0.07
XRCC3-208ENST00000554811 RNF214Q8ND24 703 aa14.64□□□□□ -0.07
XRCC3-208ENST00000554811 UBE2Q2Q8WVN8 375 aa14.64□□□□□ -0.07
XRCC3-208ENST00000554811 SHROOM2Q13796 1616 aa14.64□□□□□ -0.07
XRCC3-208ENST00000554811 ABCC11Q96J66 1382 aa14.63□□□□□ -0.07
XRCC3-208ENST00000554811 YEATS2Q9ULM3 1422 aa14.63□□□□□ -0.07
XRCC3-208ENST00000554811 PPRC1Q5VV67 1664 aaKnown RBP14.63□□□□□ -0.07
XRCC3-208ENST00000554811 ALDH1L2Q3SY69 923 aa14.63□□□□□ -0.07
XRCC3-208ENST00000554811 ANO2Q9NQ90 1003 aa14.63□□□□□ -0.07
XRCC3-208ENST00000554811 MRE11P49959 708 aa14.63□□□□□ -0.07
XRCC3-208ENST00000554811 MROH2AA6NES4 1674 aa14.63□□□□□ -0.07
XRCC3-208ENST00000554811 BMP2KLQ5H9B9 411 aa14.62□□□□□ -0.07
XRCC3-208ENST00000554811 LARP6Q9BRS8 491 aaKnown RBP14.62□□□□□ -0.07
XRCC3-208ENST00000554811 NSD2O96028 1365 aa14.62□□□□□ -0.07
XRCC3-208ENST00000554811 PRPF40AO75400 957 aaKnown RBP14.62□□□□□ -0.07
XRCC3-208ENST00000554811 SIRT2Q8IXJ6 389 aa14.62□□□□□ -0.07
XRCC3-208ENST00000554811 STK31Q9BXU1 1019 aa14.62□□□□□ -0.07
XRCC3-208ENST00000554811 YTHDC2Q9H6S0 1430 aaKnown RBP14.62□□□□□ -0.07
XRCC3-208ENST00000554811 WASLO00401 505 aaPredicted RBP14.61□□□□□ -0.07
XRCC3-208ENST00000554811 QRICH2Q9H0J4 1663 aa14.61□□□□□ -0.07
XRCC3-208ENST00000554811 OS9Q13438 667 aaPredicted RBP14.61□□□□□ -0.07
XRCC3-208ENST00000554811 IL1RAPL2Q9NP60 686 aa14.61□□□□□ -0.07
XRCC3-208ENST00000554811 NEK4P51957 841 aa14.61□□□□□ -0.07
XRCC3-208ENST00000554811 CCDC61Q9Y6R9 512 aa14.61□□□□□ -0.07
XRCC3-208ENST00000554811 CLASP1Q7Z460 1538 aa14.6□□□□□ -0.07
XRCC3-208ENST00000554811 AEBP2Q6ZN18 517 aaPredicted RBP14.6□□□□□ -0.07
XRCC3-208ENST00000554811 IFT57Q9NWB7 429 aa14.6□□□□□ -0.07
XRCC3-208ENST00000554811 PTMAP06454 111 aaKnown RBP14.6□□□□□ -0.07
XRCC3-208ENST00000554811 PKP1Q13835 747 aa14.6□□□□□ -0.07
XRCC3-208ENST00000554811 CFAP44Q96MT7 982 aa14.6□□□□□ -0.07
XRCC3-208ENST00000554811 CEBPAP49715 358 aaPredicted RBP14.59□□□□□ -0.07
XRCC3-208ENST00000554811 INTS3Q68E01 1043 aaKnown RBP14.59□□□□□ -0.07
XRCC3-208ENST00000554811 GAS2L3Q86XJ1 694 aa14.59□□□□□ -0.07
XRCC3-208ENST00000554811 ZGPATQ8N5A5 531 aaKnown RBP14.59□□□□□ -0.07
XRCC3-208ENST00000554811 USHBP1Q8N6Y0 703 aa14.59□□□□□ -0.07
XRCC3-208ENST00000554811 UPF3BQ9BZI7 483 aaKnown RBP14.59□□□□□ -0.07
XRCC3-208ENST00000554811 RBM27Q9P2N5 1060 aaKnown RBP14.59□□□□□ -0.07
XRCC3-208ENST00000554811 TULP4Q9NRJ4 1543 aa14.59□□□□□ -0.07
XRCC3-208ENST00000554811 UHRF1BP1LA0JNW5 1464 aa14.59□□□□□ -0.07
XRCC3-208ENST00000554811 ST18O60284 1047 aa14.59□□□□□ -0.07
XRCC3-208ENST00000554811 POGZQ7Z3K3 1410 aa14.59□□□□□ -0.07
XRCC3-208ENST00000554811 GSPT1P15170 499 aaKnown RBP14.59□□□□□ -0.07
XRCC3-208ENST00000554811 NASPP49321 788 aaPredicted RBP14.59□□□□□ -0.07
XRCC3-208ENST00000554811 G2E3Q7L622 706 aa14.59□□□□□ -0.07
XRCC3-208ENST00000554811 TAOK2Q9UL54 1235 aa14.59□□□□□ -0.07
XRCC3-208ENST00000554811 IL16Q14005 1332 aa14.58□□□□□ -0.08
XRCC3-208ENST00000554811 PPIP5K1Q6PFW1 1433 aa14.58□□□□□ -0.08
XRCC3-208ENST00000554811 SDSP20132 328 aa14.58□□□□□ -0.08
XRCC3-208ENST00000554811 IL13P35225 146 aa14.57□□□□□ -0.08
XRCC3-208ENST00000554811 PLEKHM2Q8IWE5 1019 aa14.57□□□□□ -0.08
XRCC3-208ENST00000554811 MSNP26038 577 aaKnown RBP14.57□□□□□ -0.08
XRCC3-208ENST00000554811 EIF4A2Q14240 407 aaKnown RBP14.57□□□□□ -0.08
XRCC3-208ENST00000554811 HMMRO75330 724 aa14.57□□□□□ -0.08
XRCC3-208ENST00000554811 DDX54Q8TDD1 881 aaKnown RBP14.56□□□□□ -0.08
XRCC3-208ENST00000554811 GDPD2Q9HCC8 539 aa14.56□□□□□ -0.08
XRCC3-208ENST00000554811 IQSEC2Q5JU85 1478 aa14.56□□□□□ -0.08
XRCC3-208ENST00000554811 GLI2P10070 1586 aa14.56□□□□□ -0.08
XRCC3-208ENST00000554811 ESPNB1AK53 854 aa14.56□□□□□ -0.08
XRCC3-208ENST00000554811 NLRP6P59044 892 aa14.55□□□□□ -0.08
XRCC3-208ENST00000554811 CCDC9Q9Y3X0 531 aaKnown RBP14.55□□□□□ -0.08
XRCC3-208ENST00000554811 ANXA1P04083 346 aa14.55□□□□□ -0.08
XRCC3-208ENST00000554811 NLRP1Q9C000 1473 aa14.55□□□□□ -0.08
XRCC3-208ENST00000554811 BAG4O95429 457 aaKnown RBP14.54□□□□□ -0.08
XRCC3-208ENST00000554811 RBM25P49756 843 aaKnown RBP14.54□□□□□ -0.08
XRCC3-208ENST00000554811 TTC22Q5TAA0 569 aa14.54□□□□□ -0.08
XRCC3-208ENST00000554811 NUTM1Q86Y26 1132 aa14.54□□□□□ -0.08
XRCC3-208ENST00000554811 CHMP3Q9Y3E7 222 aa14.54□□□□□ -0.08
XRCC3-208ENST00000554811 INO80Q9ULG1 1556 aaPredicted RBP14.54□□□□□ -0.08
XRCC3-208ENST00000554811 KIDINS220Q9ULH0 1771 aa14.54□□□□□ -0.08
XRCC3-208ENST00000554811 ADGRB3O60242 1522 aa14.54□□□□□ -0.08
XRCC3-208ENST00000554811 DNTTIP2Q5QJE6 756 aaKnown RBP14.53□□□□□ -0.08
XRCC3-208ENST00000554811 ACEP12821 1306 aa14.53□□□□□ -0.08
XRCC3-208ENST00000554811 REC8O95072 547 aa14.53□□□□□ -0.08
XRCC3-208ENST00000554811 RABEP1Q15276 862 aa14.53□□□□□ -0.08
XRCC3-208ENST00000554811 ABCC3O15438 1527 aa14.52□□□□□ -0.08
XRCC3-208ENST00000554811 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.52□□□□□ -0.08
XRCC3-208ENST00000554811 MSH6P52701 1360 aa14.52□□□□□ -0.08
XRCC3-208ENST00000554811 RAB3GAP1Q15042 981 aa14.52□□□□□ -0.09
XRCC3-208ENST00000554811 SKOR2Q2VWA4 1001 aaPredicted RBP14.52□□□□□ -0.09
XRCC3-208ENST00000554811 CEP85Q6P2H3 762 aa14.52□□□□□ -0.09
XRCC3-208ENST00000554811 KCNJ4P48050 445 aa14.51□□□□□ -0.09
XRCC3-208ENST00000554811 SYCE3A1L190 88 aa14.51□□□□□ -0.09
XRCC3-208ENST00000554811 ADGRB1O14514 1584 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms