RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 WNK3Q9BYP7 1800 aa17.45■□□□□ 0.38
MTHFD1-207ENST00000554677 TOM1L2Q6ZVM7 507 aa17.45■□□□□ 0.38
MTHFD1-207ENST00000554677 KCNH5Q8NCM2 988 aa17.45■□□□□ 0.38
MTHFD1-207ENST00000554677 LRRC37A3O60309 1634 aa17.44■□□□□ 0.38
MTHFD1-207ENST00000554677 KTN1Q86UP2 1357 aaKnown RBP17.44■□□□□ 0.38
MTHFD1-207ENST00000554677 NFAT5O94916 1531 aa17.44■□□□□ 0.38
MTHFD1-207ENST00000554677 CD163L1Q9NR16 1453 aa17.44■□□□□ 0.38
MTHFD1-207ENST00000554677 SOX12O15370 315 aa17.43■□□□□ 0.38
MTHFD1-207ENST00000554677 PTF1AQ7RTS3 328 aa17.43■□□□□ 0.38
MTHFD1-207ENST00000554677 CARD11Q9BXL7 1154 aa17.43■□□□□ 0.38
MTHFD1-207ENST00000554677 C11orf95C9JLR9 678 aaPredicted RBP17.42■□□□□ 0.38
MTHFD1-207ENST00000554677 DDB1Q16531 1140 aa17.42■□□□□ 0.38
MTHFD1-207ENST00000554677 MARCH10Q8NA82 808 aaPredicted RBP17.42■□□□□ 0.38
MTHFD1-207ENST00000554677 CARD10Q9BWT7 1032 aa17.42■□□□□ 0.38
MTHFD1-207ENST00000554677 USP31Q70CQ4 1352 aa17.41■□□□□ 0.38
MTHFD1-207ENST00000554677 OVOS2A0A0G2JMS6 1433 aa17.41■□□□□ 0.38
MTHFD1-207ENST00000554677 OVOS2A0A0J9YW53 1432 aa17.41■□□□□ 0.38
MTHFD1-207ENST00000554677 OVOS2Q6IE36 1432 aa17.41■□□□□ 0.38
MTHFD1-207ENST00000554677 SLC12A5Q9H2X9 1139 aa17.41■□□□□ 0.38
MTHFD1-207ENST00000554677 USP54Q70EL1 1684 aa17.41■□□□□ 0.38
MTHFD1-207ENST00000554677 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.4■□□□□ 0.38
MTHFD1-207ENST00000554677 PLSCR1O15162 318 aa17.39■□□□□ 0.37
MTHFD1-207ENST00000554677 NME9Q86XW9 330 aa17.39■□□□□ 0.37
MTHFD1-207ENST00000554677 KAT6BQ8WYB5 2073 aa17.38■□□□□ 0.37
MTHFD1-207ENST00000554677 CDCA7Q9BWT1 371 aaPredicted RBP17.38■□□□□ 0.37
MTHFD1-207ENST00000554677 RGPD3A6NKT7 1758 aaPredicted RBP17.38■□□□□ 0.37
MTHFD1-207ENST00000554677 RGPD4Q7Z3J3 1758 aa17.38■□□□□ 0.37
MTHFD1-207ENST00000554677 BCL9O00512 1426 aa17.38■□□□□ 0.37
MTHFD1-207ENST00000554677 NBPF14Q5TI25 921 aa17.37■□□□□ 0.37
MTHFD1-207ENST00000554677 PROM2Q8N271 834 aa17.37■□□□□ 0.37
MTHFD1-207ENST00000554677 BCL11BQ9C0K0 894 aaPredicted RBP17.37■□□□□ 0.37
MTHFD1-207ENST00000554677 LTN1O94822 1766 aa17.37■□□□□ 0.37
MTHFD1-207ENST00000554677 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
MTHFD1-207ENST00000554677 CSB-PGBD3P0DP91 1061 aa17.36■□□□□ 0.37
MTHFD1-207ENST00000554677 TMC1Q8TDI8 760 aa17.36■□□□□ 0.37
MTHFD1-207ENST00000554677 PUS7Q96PZ0 661 aaKnown RBP17.36■□□□□ 0.37
MTHFD1-207ENST00000554677 ABCC6O95255 1503 aa17.36■□□□□ 0.37
MTHFD1-207ENST00000554677 TESK2Q96S53 571 aa17.35■□□□□ 0.37
MTHFD1-207ENST00000554677 TONSLQ96HA7 1378 aa17.35■□□□□ 0.37
MTHFD1-207ENST00000554677 EXOC5O00471 708 aa17.34■□□□□ 0.37
MTHFD1-207ENST00000554677 EDC4Q6P2E9 1401 aaKnown RBP17.33■□□□□ 0.36
MTHFD1-207ENST00000554677 CCDC7Q96M83 1385 aa17.33■□□□□ 0.36
MTHFD1-207ENST00000554677 HDGFL2Q7Z4V5 671 aaPredicted RBP17.33■□□□□ 0.36
MTHFD1-207ENST00000554677 ANO8Q9HCE9 1232 aaPredicted RBP17.33■□□□□ 0.36
MTHFD1-207ENST00000554677 A0A1W2PP64 1363 aa17.32■□□□□ 0.36
MTHFD1-207ENST00000554677 ERBB3P21860 1342 aa17.32■□□□□ 0.36
MTHFD1-207ENST00000554677 ST20-MTHFSA0A0A6YYL1 179 aa17.31■□□□□ 0.36
MTHFD1-207ENST00000554677 KCNQ2O43526 872 aa17.3■□□□□ 0.36
MTHFD1-207ENST00000554677 TERF2IPQ9NYB0 399 aa17.3■□□□□ 0.36
MTHFD1-207ENST00000554677 ANKRD24Q8TF21 1146 aa17.29■□□□□ 0.36
MTHFD1-207ENST00000554677 PDGFDQ9GZP0 370 aaPredicted RBP17.29■□□□□ 0.36
MTHFD1-207ENST00000554677 NLRP2Q9NX02 1062 aa17.29■□□□□ 0.36
MTHFD1-207ENST00000554677 CASZ1Q86V15 1759 aa17.29■□□□□ 0.36
MTHFD1-207ENST00000554677 TNS2Q63HR2 1409 aa17.29■□□□□ 0.36
MTHFD1-207ENST00000554677 SPON1Q9HCB6 807 aa17.27■□□□□ 0.36
MTHFD1-207ENST00000554677 IL2RBP14784 551 aa17.26■□□□□ 0.35
MTHFD1-207ENST00000554677 FBLN1P23142 703 aa17.26■□□□□ 0.35
MTHFD1-207ENST00000554677 TXNRD1Q16881 649 aa17.26■□□□□ 0.35
MTHFD1-207ENST00000554677 IP6K1Q92551 441 aa17.26■□□□□ 0.35
MTHFD1-207ENST00000554677 NHSQ6T4R5 1651 aa17.26■□□□□ 0.35
MTHFD1-207ENST00000554677 ACSBG1Q96GR2 724 aa17.24■□□□□ 0.35
MTHFD1-207ENST00000554677 RGPD2P0DJD1 1756 aa17.24■□□□□ 0.35
MTHFD1-207ENST00000554677 NINLQ9Y2I6 1382 aa17.24■□□□□ 0.35
MTHFD1-207ENST00000554677 BTAF1O14981 1849 aa17.24■□□□□ 0.35
MTHFD1-207ENST00000554677 TRIM26Q12899 539 aaPredicted RBP17.22■□□□□ 0.35
MTHFD1-207ENST00000554677 MAP3K19Q56UN5 1328 aa17.21■□□□□ 0.35
MTHFD1-207ENST00000554677 SLC15A2Q16348 729 aa17.21■□□□□ 0.35
MTHFD1-207ENST00000554677 HOXC9P31274 260 aa17.2■□□□□ 0.34
MTHFD1-207ENST00000554677 PTGER2P43116 358 aa17.2■□□□□ 0.34
MTHFD1-207ENST00000554677 LTV1Q96GA3 475 aaPredicted RBP17.2■□□□□ 0.34
MTHFD1-207ENST00000554677 COG3Q96JB2 828 aa17.2■□□□□ 0.34
MTHFD1-207ENST00000554677 PPP1R1BQ9UD71 204 aaPredicted RBP17.2■□□□□ 0.34
MTHFD1-207ENST00000554677 FAM208AQ9UK61 1670 aaKnown RBP17.2■□□□□ 0.34
MTHFD1-207ENST00000554677 ANKRD36BQ8N2N9 1353 aa17.19■□□□□ 0.34
MTHFD1-207ENST00000554677 FYB1O15117 783 aa17.19■□□□□ 0.34
MTHFD1-207ENST00000554677 ZBTB7AO95365 584 aa17.19■□□□□ 0.34
MTHFD1-207ENST00000554677 STK32BQ9NY57 414 aa17.19■□□□□ 0.34
MTHFD1-207ENST00000554677 PAPPAQ13219 1627 aa17.18■□□□□ 0.34
MTHFD1-207ENST00000554677 LRRC4BQ9NT99 713 aa17.17■□□□□ 0.34
MTHFD1-207ENST00000554677 ATF5Q9Y2D1 282 aaPredicted RBP17.17■□□□□ 0.34
MTHFD1-207ENST00000554677 USP47Q96K76 1375 aa17.16■□□□□ 0.34
MTHFD1-207ENST00000554677 SHANK3Q9BYB0 1731 aa17.16■□□□□ 0.34
MTHFD1-207ENST00000554677 AMPHP49418 695 aa17.16■□□□□ 0.34
MTHFD1-207ENST00000554677 DDX54Q8TDD1 881 aaKnown RBP17.16■□□□□ 0.34
MTHFD1-207ENST00000554677 TMF1P82094 1093 aa17.15■□□□□ 0.34
MTHFD1-207ENST00000554677 RRS1Q15050 365 aaKnown RBP17.15■□□□□ 0.34
MTHFD1-207ENST00000554677 SGIP1Q9BQI5 828 aa17.15■□□□□ 0.34
MTHFD1-207ENST00000554677 GGNBP2Q9H3C7 697 aa17.15■□□□□ 0.34
MTHFD1-207ENST00000554677 MYOM1P52179 1685 aa17.15■□□□□ 0.34
MTHFD1-207ENST00000554677 ZNF827Q17R98 1081 aa17.13■□□□□ 0.33
MTHFD1-207ENST00000554677 NBPF6Q5VWK0 638 aa17.13■□□□□ 0.33
MTHFD1-207ENST00000554677 NBPF4Q96M43 638 aa17.13■□□□□ 0.33
MTHFD1-207ENST00000554677 UTRNP46939 3433 aa17.12■□□□□ 0.33
MTHFD1-207ENST00000554677 CARD14Q9BXL6 1004 aa17.12■□□□□ 0.33
MTHFD1-207ENST00000554677 MTFR1LQ9H019 292 aa17.12■□□□□ 0.33
MTHFD1-207ENST00000554677 MEGF6O75095 1541 aa17.11■□□□□ 0.33
MTHFD1-207ENST00000554677 PRIM1P49642 420 aaKnown RBP17.11■□□□□ 0.33
MTHFD1-207ENST00000554677 ZCRB1Q8TBF4 217 aaKnown RBP17.11■□□□□ 0.33
MTHFD1-207ENST00000554677 AKT1S1Q96B36 256 aa17.11■□□□□ 0.33
MTHFD1-207ENST00000554677 KIF20BQ96Q89 1820 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms