RNA–Protein interactions for RNA: ENST00000554573.5

RALGAPA1-208, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 5

Gene RALGAPA1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-208	ENST00000554573	SYMPK	Q92797	1274 aa	Known RBP	4.85	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	ACBD3	Q9H3P7	528 aa		4.85	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	TUT1	Q9H6E5	874 aa	Known RBP	4.85	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	PER1	O15534	1290 aa	Predicted RBP	4.84	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	PRMT3	O60678	531 aa		4.84	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	NR6A1	Q15406	480 aa		4.84	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	ECM1	Q16610	540 aa		4.84	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	NYAP1	Q6ZVC0	841 aa		4.84	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	JAZF1	Q86VZ6	243 aa		4.84	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	NT5DC4	Q86YG4	428 aa		4.84	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	ANO8	Q9HCE9	1232 aa	Predicted RBP	4.84	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	G3BP2	Q9UN86	482 aa	Known RBP	4.84	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	ADGRG1	Q9Y653	693 aa		4.84	□□□□□ -1.63
RALGAPA1-208	ENST00000554573	EN1	Q05925	392 aa	Predicted RBP	4.84	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	CC2D2B	Q6DHV5	1058 aa		4.84	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	EXOC8	Q8IYI6	725 aa		4.84	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	MRPL50	Q8N5N7	158 aa	Known RBP	4.84	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	ZNF594	Q96JF6	807 aa	Predicted RBP	4.84	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	JPH4	Q96JJ6	628 aa		4.84	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	PROX2	Q3B8N5	592 aa		4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	TSGA10IP	Q3SY00	556 aa		4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	WWC1	Q8IX03	1113 aa		4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	ZDHHC16	Q969W1	377 aa		4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	PURB	Q96QR8	312 aa	Known RBP	4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	MKNK1	Q9BUB5	465 aa		4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	PRKAG2	Q9UGJ0	569 aa		4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	SEPT3	Q9UH03	358 aa		4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	GOLGA8CP	A6NN73	597 aa		4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	DDX11L8	A8MPP1	907 aa		4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	SPTLC1	O15269	473 aa		4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	DNAJA1	P31689	397 aa	Known RBP	4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	EGFLAM	Q63HQ2	1017 aa		4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	METTL16	Q86W50	562 aa	Known RBP	4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	PRIMPOL	Q96LW4	560 aa		4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	TINF2	Q9BSI4	451 aa		4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	FAM198A	Q9UFP1	575 aa		4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	PCDHGA10	Q9Y5H3	936 aa		4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	MRPL42	Q9Y6G3	142 aa	Known RBP	4.83	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	CFAP99	D6REC4	459 aa		4.82	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	TPD52L2	O43399	206 aa	Known RBP	4.82	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	WIPF1	O43516	503 aa		4.82	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	ATP9B	O43861	1147 aa		4.82	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	PCDHGB7	Q9Y5F8	929 aa		4.82	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L3	A6NCW0	530 aa		4.82	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L4	A6NCW7	530 aa		4.82	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	COL9A1	P20849	921 aa		4.82	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	MAPK1	P28482	360 aa		4.82	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	PSME1	Q06323	249 aa		4.82	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L2	Q6R6M4	530 aa		4.82	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L1	Q7RTZ2	530 aa		4.82	□□□□□ -1.64
RALGAPA1-208	ENST00000554573		V9GY48	417 aa	Predicted RBP	4.82	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	ATP2B4	P23634	1241 aa		4.81	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	KCNC4	Q03721	635 aa		4.81	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	FAM50A	Q14320	339 aa	Known RBP	4.81	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	SGSM3	Q96HU1	749 aa		4.81	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	ZSWIM4	Q9H7M6	989 aa		4.81	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	ARID4A	P29374	1257 aa	Predicted RBP	4.8	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	BCAM	P50895	628 aa		4.8	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	CBLB	Q13191	982 aa		4.8	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	BMS1	Q14692	1282 aa	Known RBP	4.8	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	CAPN10	Q9HC96	672 aa		4.8	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	KIAA1024	Q9UPX6	916 aa		4.8	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	TBX22	Q9Y458	520 aa		4.8	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	P4HB	P07237	508 aa	Known RBP	4.8	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	RAVER1	Q8IY67	606 aa	Known RBP	4.8	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	STAG1	Q8WVM7	1258 aa		4.8	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	WWC3	Q9ULE0	1092 aa		4.8	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L15	C9J2P7	530 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L10	C9JJH3	530 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L13	C9JLJ4	530 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L12	C9JPN9	530 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L11	C9JVI0	530 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L21	D6R901	530 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L18	D6R9N7	530 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L22	D6RA61	530 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L17	D6RBQ6	530 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L19	D6RCP7	530 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L20	D6RJB6	530 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	CD46	P15529	392 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	USP17L24	Q0WX57	530 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	SEMA3F	Q13275	785 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	NCOA4	Q13772	614 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	HELB	Q8NG08	1087 aa	Predicted RBP	4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	NBPF3	Q9H094	633 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	TLDC2	A0PJX2	215 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	NCL	P19338	710 aa	Known RBP	4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	PTK7	Q13308	1070 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	MRPL58	Q14197	206 aa	Known RBP	4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	ZNF394	Q53GI3	561 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	ZNF326	Q5BKZ1	582 aa	Known RBP	4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	SDE2	Q6IQ49	451 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	PPP1R18	Q6NYC8	613 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	KANSL2	Q9H9L4	492 aa		4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	MKRN1	Q9UHC7	482 aa	Known RBP	4.79	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	FAM181B	A6NEQ2	426 aa		4.78	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	CENPB	P07199	599 aa	Predicted RBP	4.78	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	CLDN10	P78369	228 aa		4.78	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	ARHGAP4	P98171	946 aa		4.78	□□□□□ -1.64
RALGAPA1-208	ENST00000554573	WASHC4	Q2M389	1173 aa		4.78	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms