RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 PDZRN3Q9UPQ7 1066 aa9.88□□□□□ -0.83
SCFD1-212ENST00000554486 UACAQ9BZF9 1416 aa9.88□□□□□ -0.83
SCFD1-212ENST00000554486 FYCO1Q9BQS8 1478 aa9.87□□□□□ -0.83
SCFD1-212ENST00000554486 AP1G2O75843 785 aa9.87□□□□□ -0.83
SCFD1-212ENST00000554486 CCDC24Q8N4L8 307 aa9.87□□□□□ -0.83
SCFD1-212ENST00000554486 LRRIQ1Q96JM4 1722 aa9.87□□□□□ -0.83
SCFD1-212ENST00000554486 UHRF1BP1LA0JNW5 1464 aa9.86□□□□□ -0.83
SCFD1-212ENST00000554486 NUP153P49790 1475 aaKnown RBP9.86□□□□□ -0.83
SCFD1-212ENST00000554486 ADCY10Q96PN6 1610 aa9.86□□□□□ -0.83
SCFD1-212ENST00000554486 NRG2O14511 850 aaPredicted RBP9.86□□□□□ -0.83
SCFD1-212ENST00000554486 PER1O15534 1290 aaPredicted RBP9.86□□□□□ -0.83
SCFD1-212ENST00000554486 MTMR14Q8NCE2 650 aa9.86□□□□□ -0.83
SCFD1-212ENST00000554486 ABCC2Q92887 1545 aa9.86□□□□□ -0.83
SCFD1-212ENST00000554486 HECW1Q76N89 1606 aa9.85□□□□□ -0.83
SCFD1-212ENST00000554486 USP17L8P0C7I0 530 aa9.85□□□□□ -0.83
SCFD1-212ENST00000554486 FLIIQ13045 1269 aa9.85□□□□□ -0.83
SCFD1-212ENST00000554486 CYB5RLQ6IPT4 315 aa9.85□□□□□ -0.83
SCFD1-212ENST00000554486 DESI1Q6ICB0 168 aa9.84□□□□□ -0.83
SCFD1-212ENST00000554486 Q6ZNB5 142 aa9.84□□□□□ -0.83
SCFD1-212ENST00000554486 LRRN4Q8WUT4 740 aa9.84□□□□□ -0.83
SCFD1-212ENST00000554486 HMX1Q9NP08 348 aaPredicted RBP9.84□□□□□ -0.83
SCFD1-212ENST00000554486 GJD4Q96KN9 370 aaPredicted RBP9.83□□□□□ -0.84
SCFD1-212ENST00000554486 NUDT12Q9BQG2 462 aa9.83□□□□□ -0.84
SCFD1-212ENST00000554486 ATP10BO94823 1461 aa9.83□□□□□ -0.84
SCFD1-212ENST00000554486 EPRSP07814 1512 aaKnown RBP9.82□□□□□ -0.84
SCFD1-212ENST00000554486 CDK13Q14004 1512 aaKnown RBP9.82□□□□□ -0.84
SCFD1-212ENST00000554486 ARID3CA6NKF2 412 aa9.82□□□□□ -0.84
SCFD1-212ENST00000554486 PRR20EP86478 221 aa9.82□□□□□ -0.84
SCFD1-212ENST00000554486 PRR20CP86479 221 aa9.82□□□□□ -0.84
SCFD1-212ENST00000554486 PRR20DP86480 221 aa9.82□□□□□ -0.84
SCFD1-212ENST00000554486 PRR20BP86481 221 aa9.82□□□□□ -0.84
SCFD1-212ENST00000554486 PRR20AP86496 221 aa9.82□□□□□ -0.84
SCFD1-212ENST00000554486 C14orf37Q86TY3 774 aa9.82□□□□□ -0.84
SCFD1-212ENST00000554486 LYPD8Q6UX82 237 aa9.81□□□□□ -0.84
SCFD1-212ENST00000554486 TSC1Q92574 1164 aa9.81□□□□□ -0.84
SCFD1-212ENST00000554486 POM121Q96HA1 1249 aa9.81□□□□□ -0.84
SCFD1-212ENST00000554486 TRIM34Q9BYJ4 488 aa9.81□□□□□ -0.84
SCFD1-212ENST00000554486 KDM5BQ9UGL1 1544 aa9.81□□□□□ -0.84
SCFD1-212ENST00000554486 CFAP43Q8NDM7 1665 aa9.8□□□□□ -0.84
SCFD1-212ENST00000554486 CCDC18Q5T9S5 1454 aa9.8□□□□□ -0.84
SCFD1-212ENST00000554486 SOCS7O14512 581 aa9.8□□□□□ -0.84
SCFD1-212ENST00000554486 PTPRNQ16849 979 aa9.8□□□□□ -0.84
SCFD1-212ENST00000554486 HELBQ8NG08 1087 aaPredicted RBP9.8□□□□□ -0.84
SCFD1-212ENST00000554486 ZCCHC11Q5TAX3 1644 aaKnown RBP9.8□□□□□ -0.84
SCFD1-212ENST00000554486 MAP3K1Q13233 1512 aa9.8□□□□□ -0.84
SCFD1-212ENST00000554486 TIAM1Q13009 1591 aa9.8□□□□□ -0.84
SCFD1-212ENST00000554486 GDF9O60383 454 aa9.79□□□□□ -0.84
SCFD1-212ENST00000554486 GPR37L1O60883 481 aa9.79□□□□□ -0.84
SCFD1-212ENST00000554486 CCNYL3P0C7X3 344 aa9.79□□□□□ -0.84
SCFD1-212ENST00000554486 FOXC1Q12948 553 aa9.79□□□□□ -0.84
SCFD1-212ENST00000554486 TRIM32Q13049 653 aa9.79□□□□□ -0.84
SCFD1-212ENST00000554486 EPS8L1Q8TE68 723 aa9.79□□□□□ -0.84
SCFD1-212ENST00000554486 MAGI3Q5TCQ9 1506 aa9.78□□□□□ -0.84
SCFD1-212ENST00000554486 TRIM67Q6ZTA4 783 aa9.78□□□□□ -0.84
SCFD1-212ENST00000554486 CLUAP1Q96AJ1 413 aa9.78□□□□□ -0.84
SCFD1-212ENST00000554486 KANK4Q5T7N3 995 aaPredicted RBP9.77□□□□□ -0.85
SCFD1-212ENST00000554486 EVA1BQ9NVM1 165 aa9.77□□□□□ -0.85
SCFD1-212ENST00000554486 COG6Q9Y2V7 657 aa9.77□□□□□ -0.85
SCFD1-212ENST00000554486 TNFRSF10AO00220 468 aa9.76□□□□□ -0.85
SCFD1-212ENST00000554486 F12P00748 615 aaPredicted RBP9.76□□□□□ -0.85
SCFD1-212ENST00000554486 ZMYND15Q9H091 742 aa9.76□□□□□ -0.85
SCFD1-212ENST00000554486 LRRC9Q6ZRR7 1453 aa9.75□□□□□ -0.85
SCFD1-212ENST00000554486 KCNH2Q12809 1159 aa9.75□□□□□ -0.85
SCFD1-212ENST00000554486 TRAF7Q6Q0C0 670 aa9.75□□□□□ -0.85
SCFD1-212ENST00000554486 PKD2L1Q9P0L9 805 aa9.75□□□□□ -0.85
SCFD1-212ENST00000554486 WNT7AO00755 349 aa9.74□□□□□ -0.85
SCFD1-212ENST00000554486 DGAT1O75907 488 aa9.74□□□□□ -0.85
SCFD1-212ENST00000554486 WNT7BP56706 349 aa9.74□□□□□ -0.85
SCFD1-212ENST00000554486 NR6A1Q15406 480 aa9.74□□□□□ -0.85
SCFD1-212ENST00000554486 PKDCCQ504Y2 493 aa9.74□□□□□ -0.85
SCFD1-212ENST00000554486 PPARGC1BQ86YN6 1023 aaKnown RBP9.74□□□□□ -0.85
SCFD1-212ENST00000554486 CYP4X1Q8N118 509 aa9.74□□□□□ -0.85
SCFD1-212ENST00000554486 MTUS2Q5JR59 1369 aa9.74□□□□□ -0.85
SCFD1-212ENST00000554486 TROQ12816 1431 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-212ENST00000554486 ASXL2Q76L83 1435 aa9.73□□□□□ -0.85
SCFD1-212ENST00000554486 EHBP1L1Q8N3D4 1523 aa9.73□□□□□ -0.85
SCFD1-212ENST00000554486 PLEKHD1A6NEE1 506 aa9.73□□□□□ -0.85
SCFD1-212ENST00000554486 CTHP32929 405 aa9.73□□□□□ -0.85
SCFD1-212ENST00000554486 ERICH6Q7L0X2 663 aa9.73□□□□□ -0.85
SCFD1-212ENST00000554486 FNBP4Q8N3X1 1017 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-212ENST00000554486 GDPD2Q9HCC8 539 aa9.73□□□□□ -0.85
SCFD1-212ENST00000554486 MAP10Q9P2G4 905 aa9.73□□□□□ -0.85
SCFD1-212ENST00000554486 TBC1D2BQ9UPU7 963 aa9.73□□□□□ -0.85
SCFD1-212ENST00000554486 CDK11AQ9UQ88 783 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-212ENST00000554486 MAPKBP1O60336 1514 aa9.72□□□□□ -0.85
SCFD1-212ENST00000554486 A6NJR5 290 aa9.72□□□□□ -0.85
SCFD1-212ENST00000554486 PTCRAQ6ISU1 281 aaPredicted RBP9.72□□□□□ -0.85
SCFD1-212ENST00000554486 WDR7Q9Y4E6 1490 aa9.72□□□□□ -0.85
SCFD1-212ENST00000554486 UNC93B1Q9H1C4 597 aa9.71□□□□□ -0.86
SCFD1-212ENST00000554486 KIF14Q15058 1648 aa9.71□□□□□ -0.86
SCFD1-212ENST00000554486 TTC24A2A3L6 582 aaPredicted RBP9.7□□□□□ -0.86
SCFD1-212ENST00000554486 FAM187AA6NFU0 413 aa9.7□□□□□ -0.86
SCFD1-212ENST00000554486 IRF5Q13568 498 aa9.7□□□□□ -0.86
SCFD1-212ENST00000554486 RC3H1Q5TC82 1133 aaKnown RBP9.7□□□□□ -0.86
SCFD1-212ENST00000554486 SUPT6HQ7KZ85 1726 aaKnown RBP9.69□□□□□ -0.86
SCFD1-212ENST00000554486 SNIP1Q8TAD8 396 aaKnown RBP9.69□□□□□ -0.86
SCFD1-212ENST00000554486 TOR4AQ9NXH8 423 aa9.69□□□□□ -0.86
SCFD1-212ENST00000554486 NCOA2Q15596 1464 aa9.68□□□□□ -0.86
SCFD1-212ENST00000554486 ABCC10Q5T3U5 1492 aa9.68□□□□□ -0.86
SCFD1-212ENST00000554486 MRGPRX2Q96LB1 330 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms