RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 PBXIP1Q96AQ6 731 aa9.81□□□□□ -0.84
FOXN3-206ENST00000554005 USP17L5A8MUK1 530 aa9.8□□□□□ -0.84
FOXN3-206ENST00000554005 NBPF20Q3BBV1 942 aa9.8□□□□□ -0.84
FOXN3-206ENST00000554005 CHIC2Q9UKJ5 165 aa9.8□□□□□ -0.84
FOXN3-206ENST00000554005 CDV3Q9UKY7 258 aaKnown RBP9.8□□□□□ -0.84
FOXN3-206ENST00000554005 USP17L3A6NCW0 530 aa9.79□□□□□ -0.84
FOXN3-206ENST00000554005 USP17L4A6NCW7 530 aa9.79□□□□□ -0.84
FOXN3-206ENST00000554005 ESPNB1AK53 854 aa9.79□□□□□ -0.84
FOXN3-206ENST00000554005 SPRYD7Q5W111 196 aa9.79□□□□□ -0.84
FOXN3-206ENST00000554005 USP17L2Q6R6M4 530 aa9.79□□□□□ -0.84
FOXN3-206ENST00000554005 USP17L1Q7RTZ2 530 aa9.79□□□□□ -0.84
FOXN3-206ENST00000554005 PLEKHM2Q8IWE5 1019 aa9.79□□□□□ -0.84
FOXN3-206ENST00000554005 PLPP7Q8NBV4 271 aa9.79□□□□□ -0.84
FOXN3-206ENST00000554005 MAP4K5Q9Y4K4 846 aa9.79□□□□□ -0.84
FOXN3-206ENST00000554005 DEPDC4Q8N2C3 294 aa9.78□□□□□ -0.84
FOXN3-206ENST00000554005 CCDC85AQ96PX6 553 aaPredicted RBP9.78□□□□□ -0.84
FOXN3-206ENST00000554005 WNT7AO00755 349 aa9.77□□□□□ -0.85
FOXN3-206ENST00000554005 TSGA10IPQ3SY00 556 aa9.77□□□□□ -0.85
FOXN3-206ENST00000554005 KCTD15Q96SI1 283 aaPredicted RBP9.77□□□□□ -0.85
FOXN3-206ENST00000554005 TLL2Q9Y6L7 1015 aa9.77□□□□□ -0.85
FOXN3-206ENST00000554005 SIAH2O43255 324 aa9.76□□□□□ -0.85
FOXN3-206ENST00000554005 NCOA4Q13772 614 aa9.76□□□□□ -0.85
FOXN3-206ENST00000554005 MAP7D1Q3KQU3 841 aa9.76□□□□□ -0.85
FOXN3-206ENST00000554005 RNF20Q5VTR2 975 aa9.76□□□□□ -0.85
FOXN3-206ENST00000554005 TRAF7Q6Q0C0 670 aa9.76□□□□□ -0.85
FOXN3-206ENST00000554005 VASH1Q7L8A9 365 aaPredicted RBP9.76□□□□□ -0.85
FOXN3-206ENST00000554005 CDK15Q96Q40 435 aa9.76□□□□□ -0.85
FOXN3-206ENST00000554005 ARID5BQ14865 1188 aa9.75□□□□□ -0.85
FOXN3-206ENST00000554005 CDCA8Q53HL2 280 aa9.75□□□□□ -0.85
FOXN3-206ENST00000554005 KANK4Q5T7N3 995 aaPredicted RBP9.75□□□□□ -0.85
FOXN3-206ENST00000554005 ZNF697Q5TEC3 545 aa9.75□□□□□ -0.85
FOXN3-206ENST00000554005 SEPT12Q8IYM1 358 aa9.75□□□□□ -0.85
FOXN3-206ENST00000554005 MRGPRX2Q96LB1 330 aa9.75□□□□□ -0.85
FOXN3-206ENST00000554005 PRKD2Q9BZL6 878 aa9.75□□□□□ -0.85
FOXN3-206ENST00000554005 DOLKQ9UPQ8 538 aa9.75□□□□□ -0.85
FOXN3-206ENST00000554005 INTS6LQ5JSJ4 861 aaKnown RBP9.74□□□□□ -0.85
FOXN3-206ENST00000554005 ZNF598Q86UK7 904 aaKnown RBP9.74□□□□□ -0.85
FOXN3-206ENST00000554005 MPNDQ8N594 471 aa9.74□□□□□ -0.85
FOXN3-206ENST00000554005 V9GY48 417 aaPredicted RBP9.74□□□□□ -0.85
FOXN3-206ENST00000554005 LZTS3O60299 673 aaPredicted RBP9.73□□□□□ -0.85
FOXN3-206ENST00000554005 RAB15P59190 212 aa9.73□□□□□ -0.85
FOXN3-206ENST00000554005 RETREG2Q8NC44 543 aa9.73□□□□□ -0.85
FOXN3-206ENST00000554005 VRTNQ9H8Y1 702 aa9.73□□□□□ -0.85
FOXN3-206ENST00000554005 FSHRP23945 695 aa9.72□□□□□ -0.85
FOXN3-206ENST00000554005 GRM5P41594 1212 aa9.72□□□□□ -0.85
FOXN3-206ENST00000554005 CDCA7Q9BWT1 371 aaPredicted RBP9.72□□□□□ -0.85
FOXN3-206ENST00000554005 PCDHB11Q9Y5F2 797 aa9.72□□□□□ -0.85
FOXN3-206ENST00000554005 ACIN1Q9UKV3 1341 aaKnown RBP9.72□□□□□ -0.85
FOXN3-206ENST00000554005 ATG7O95352 703 aa9.71□□□□□ -0.86
FOXN3-206ENST00000554005 EML3Q32P44 896 aa9.71□□□□□ -0.86
FOXN3-206ENST00000554005 OXLD1Q5BKU9 147 aa9.71□□□□□ -0.86
FOXN3-206ENST00000554005 CCDC125Q86Z20 511 aa9.71□□□□□ -0.86
FOXN3-206ENST00000554005 PKD2L1Q9P0L9 805 aa9.71□□□□□ -0.86
FOXN3-206ENST00000554005 MKRN1Q9UHC7 482 aaKnown RBP9.71□□□□□ -0.86
FOXN3-206ENST00000554005 ADH1CP00326 375 aa9.7□□□□□ -0.86
FOXN3-206ENST00000554005 FOXC1Q12948 553 aa9.7□□□□□ -0.86
FOXN3-206ENST00000554005 ERVH48-1M5A8F1 160 aa9.69□□□□□ -0.86
FOXN3-206ENST00000554005 ATP5J2-PTCD1G3V325 749 aa9.68□□□□□ -0.86
FOXN3-206ENST00000554005 CRTC2Q53ET0 693 aaPredicted RBP9.68□□□□□ -0.86
FOXN3-206ENST00000554005 NOD1Q9Y239 953 aa9.68□□□□□ -0.86
FOXN3-206ENST00000554005 FAM196BA6NMK8 535 aa9.67□□□□□ -0.86
FOXN3-206ENST00000554005 NR5A1Q13285 461 aa9.67□□□□□ -0.86
FOXN3-206ENST00000554005 USP17L15C9J2P7 530 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 USP17L10C9JJH3 530 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 USP17L13C9JLJ4 530 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 USP17L12C9JPN9 530 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 USP17L11C9JVI0 530 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 USP17L21D6R901 530 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 USP17L18D6R9N7 530 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 USP17L22D6RA61 530 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 USP17L17D6RBQ6 530 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 USP17L19D6RCP7 530 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 USP17L20D6RJB6 530 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 GDF9O60383 454 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 ALDH1A1P00352 501 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 NR3C2P08235 984 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 RASA1P20936 1047 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 USP17L24Q0WX57 530 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 TRIM50Q86XT4 487 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 ZMIZ1Q9ULJ6 1067 aa9.66□□□□□ -0.86
FOXN3-206ENST00000554005 CSB-PGBD3P0DP91 1061 aa9.65□□□□□ -0.86
FOXN3-206ENST00000554005 SCTRP47872 440 aa9.65□□□□□ -0.86
FOXN3-206ENST00000554005 CLDN10P78369 228 aa9.65□□□□□ -0.86
FOXN3-206ENST00000554005 DHX9Q08211 1270 aaKnown RBP9.65□□□□□ -0.86
FOXN3-206ENST00000554005 USP4Q13107 963 aa9.65□□□□□ -0.86
FOXN3-206ENST00000554005 PTK7Q13308 1070 aa9.65□□□□□ -0.86
FOXN3-206ENST00000554005 ELOAQ14241 798 aaKnown RBP9.65□□□□□ -0.86
FOXN3-206ENST00000554005 CCDC116Q8IYX3 515 aa9.65□□□□□ -0.86
FOXN3-206ENST00000554005 OGFOD1Q8N543 542 aa9.65□□□□□ -0.86
FOXN3-206ENST00000554005 TMPRSS4Q9NRS4 437 aa9.65□□□□□ -0.86
FOXN3-206ENST00000554005 PDIA4P13667 645 aaKnown RBP9.64□□□□□ -0.87
FOXN3-206ENST00000554005 ERVK-9P63128 1117 aa9.64□□□□□ -0.87
FOXN3-206ENST00000554005 GTF2IP78347 998 aa9.64□□□□□ -0.87
FOXN3-206ENST00000554005 PPP1R26Q5T8A7 1209 aaPredicted RBP9.64□□□□□ -0.87
FOXN3-206ENST00000554005 LARP1Q6PKG0 1096 aaKnown RBP9.64□□□□□ -0.87
FOXN3-206ENST00000554005 SNIP1Q8TAD8 396 aaKnown RBP9.64□□□□□ -0.87
FOXN3-206ENST00000554005 SIRT1Q96EB6 747 aa9.64□□□□□ -0.87
FOXN3-206ENST00000554005 NOVA2Q9UNW9 492 aaKnown RBP9.64□□□□□ -0.87
FOXN3-206ENST00000554005 USTQ9Y2C2 406 aa9.64□□□□□ -0.87
FOXN3-206ENST00000554005 TNFRSF10AO00220 468 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms