RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 NUTM2BA6NNL0 878 aaPredicted RBP12.12□□□□□ -0.47
MARK3-207ENST00000553942 NUTM2EB1AL46 878 aaPredicted RBP12.12□□□□□ -0.47
MARK3-207ENST00000553942 APAF1O14727 1248 aa12.12□□□□□ -0.47
MARK3-207ENST00000553942 NUTM2AQ8IVF1 878 aaPredicted RBP12.12□□□□□ -0.47
MARK3-207ENST00000553942 TOM1O60784 492 aa12.12□□□□□ -0.47
MARK3-207ENST00000553942 HAP1P54257 671 aaPredicted RBP12.12□□□□□ -0.47
MARK3-207ENST00000553942 USP31Q70CQ4 1352 aa12.11□□□□□ -0.47
MARK3-207ENST00000553942 HOXC9P31274 260 aa12.11□□□□□ -0.47
MARK3-207ENST00000553942 CFAP53Q96M91 514 aa12.11□□□□□ -0.47
MARK3-207ENST00000553942 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
MARK3-207ENST00000553942 IL13P35225 146 aa12.11□□□□□ -0.47
MARK3-207ENST00000553942 PHACTR3Q96KR7 559 aa12.11□□□□□ -0.47
MARK3-207ENST00000553942 TNS3Q68CZ2 1445 aa12.1□□□□□ -0.47
MARK3-207ENST00000553942 KIF1AQ12756 1690 aa12.1□□□□□ -0.47
MARK3-207ENST00000553942 COL3A1P02461 1466 aaPredicted RBP12.1□□□□□ -0.47
MARK3-207ENST00000553942 ADAMTS2O95450 1211 aa12.1□□□□□ -0.47
MARK3-207ENST00000553942 CDCA7LQ96GN5 454 aa12.09□□□□□ -0.47
MARK3-207ENST00000553942 KIAA0232Q92628 1395 aa12.09□□□□□ -0.47
MARK3-207ENST00000553942 SULT6B1Q6IMI4 303 aa12.09□□□□□ -0.47
MARK3-207ENST00000553942 ALS2Q96Q42 1657 aa12.09□□□□□ -0.47
MARK3-207ENST00000553942 ARHGEF25Q86VW2 580 aa12.08□□□□□ -0.48
MARK3-207ENST00000553942 EYA1Q99502 592 aa12.08□□□□□ -0.48
MARK3-207ENST00000553942 AATKQ6ZMQ8 1374 aa12.08□□□□□ -0.48
MARK3-207ENST00000553942 PRKAR2BP31323 418 aa12.08□□□□□ -0.48
MARK3-207ENST00000553942 PNPLA6Q8IY17 1366 aa12.08□□□□□ -0.48
MARK3-207ENST00000553942 NFAT5O94916 1531 aa12.07□□□□□ -0.48
MARK3-207ENST00000553942 NBPF6Q5VWK0 638 aa12.07□□□□□ -0.48
MARK3-207ENST00000553942 NBPF4Q96M43 638 aa12.07□□□□□ -0.48
MARK3-207ENST00000553942 USP35Q9P2H5 1018 aa12.07□□□□□ -0.48
MARK3-207ENST00000553942 USP19O94966 1318 aa12.07□□□□□ -0.48
MARK3-207ENST00000553942 SBNO1A3KN83 1393 aa12.07□□□□□ -0.48
MARK3-207ENST00000553942 HSPA1LP34931 641 aa12.07□□□□□ -0.48
MARK3-207ENST00000553942 LTN1O94822 1766 aa12.06□□□□□ -0.48
MARK3-207ENST00000553942 TCP11L2Q8N4U5 519 aa12.06□□□□□ -0.48
MARK3-207ENST00000553942 THUMPD2Q9BTF0 503 aaKnown RBP12.06□□□□□ -0.48
MARK3-207ENST00000553942 SPINK5Q9NQ38 1064 aaPredicted RBP12.06□□□□□ -0.48
MARK3-207ENST00000553942 STRN4Q9NRL3 753 aa12.06□□□□□ -0.48
MARK3-207ENST00000553942 FAM83GA6ND36 823 aa12.06□□□□□ -0.48
MARK3-207ENST00000553942 PRDM11Q9NQV5 511 aa12.06□□□□□ -0.48
MARK3-207ENST00000553942 FLT4P35916 1363 aa12.05□□□□□ -0.48
MARK3-207ENST00000553942 DCTN1Q14203 1278 aa12.05□□□□□ -0.48
MARK3-207ENST00000553942 KCNH5Q8NCM2 988 aa12.05□□□□□ -0.48
MARK3-207ENST00000553942 PLEKHF1Q96S99 279 aa12.05□□□□□ -0.48
MARK3-207ENST00000553942 RGPD5Q99666 1765 aa12.05□□□□□ -0.48
MARK3-207ENST00000553942 NHSL1Q5SYE7 1610 aa12.04□□□□□ -0.48
MARK3-207ENST00000553942 ANKRD24Q8TF21 1146 aa12.04□□□□□ -0.48
MARK3-207ENST00000553942 IP6K1Q92551 441 aa12.04□□□□□ -0.48
MARK3-207ENST00000553942 RSPH6AQ9H0K4 717 aa12.04□□□□□ -0.48
MARK3-207ENST00000553942 NUDCQ9Y266 331 aa12.04□□□□□ -0.48
MARK3-207ENST00000553942 CDK12Q9NYV4 1490 aaPredicted RBP12.04□□□□□ -0.48
MARK3-207ENST00000553942 EIF5BO60841 1220 aaKnown RBP12.04□□□□□ -0.48
MARK3-207ENST00000553942 SMG6Q86US8 1419 aaKnown RBP12.03□□□□□ -0.48
MARK3-207ENST00000553942 RGPD2P0DJD1 1756 aa12.03□□□□□ -0.48
MARK3-207ENST00000553942 CSB-PGBD3P0DP91 1061 aa12.03□□□□□ -0.48
MARK3-207ENST00000553942 NLRP2Q9NX02 1062 aa12.03□□□□□ -0.48
MARK3-207ENST00000553942 PHLPP1O60346 1717 aa12.03□□□□□ -0.48
MARK3-207ENST00000553942 SLIT3O75094 1523 aa12.02□□□□□ -0.48
MARK3-207ENST00000553942 EP400Q96L91 3159 aa12.02□□□□□ -0.48
MARK3-207ENST00000553942 ARHGEF10O15013 1369 aa12.02□□□□□ -0.49
MARK3-207ENST00000553942 BLMP54132 1417 aaPredicted RBP12.02□□□□□ -0.49
MARK3-207ENST00000553942 PHRF1Q9P1Y6 1649 aaKnown RBP12.02□□□□□ -0.49
MARK3-207ENST00000553942 RUNDC1Q96C34 613 aa12.02□□□□□ -0.49
MARK3-207ENST00000553942 BTG4Q9NY30 223 aa12.01□□□□□ -0.49
MARK3-207ENST00000553942 INSRP06213 1382 aa12.01□□□□□ -0.49
MARK3-207ENST00000553942 LARP1Q6PKG0 1096 aaKnown RBP12□□□□□ -0.49
MARK3-207ENST00000553942 COL16A1Q07092 1604 aaPredicted RBP12□□□□□ -0.49
MARK3-207ENST00000553942 CCDC136Q96JN2 1154 aa12□□□□□ -0.49
MARK3-207ENST00000553942 ERBB3P21860 1342 aa11.99□□□□□ -0.49
MARK3-207ENST00000553942 ZBED9Q6R2W3 1325 aa11.99□□□□□ -0.49
MARK3-207ENST00000553942 MAPK8IP3Q9UPT6 1336 aa11.99□□□□□ -0.49
MARK3-207ENST00000553942 RIPK4P57078 832 aa11.99□□□□□ -0.49
MARK3-207ENST00000553942 CRYBG1Q9Y4K1 1723 aa11.99□□□□□ -0.49
MARK3-207ENST00000553942 CAMTA1Q9Y6Y1 1673 aa11.99□□□□□ -0.49
MARK3-207ENST00000553942 TMPOP42166 694 aaKnown RBP11.99□□□□□ -0.49
MARK3-207ENST00000553942 MTHFSDQ2M296 383 aaKnown RBP11.99□□□□□ -0.49
MARK3-207ENST00000553942 MCM10Q7L590 875 aa11.99□□□□□ -0.49
MARK3-207ENST00000553942 C8orf37Q96NL8 207 aa11.99□□□□□ -0.49
MARK3-207ENST00000553942 NOP58Q9Y2X3 529 aaKnown RBP11.99□□□□□ -0.49
MARK3-207ENST00000553942 TRIM35Q9UPQ4 493 aa11.98□□□□□ -0.49
MARK3-207ENST00000553942 LAS1LQ9Y4W2 734 aaKnown RBP11.98□□□□□ -0.49
MARK3-207ENST00000553942 AHDC1Q5TGY3 1603 aaPredicted RBP11.98□□□□□ -0.49
MARK3-207ENST00000553942 IGSF1Q8N6C5 1336 aa11.98□□□□□ -0.49
MARK3-207ENST00000553942 FCHSD2O94868 740 aa11.98□□□□□ -0.49
MARK3-207ENST00000553942 IRX6P78412 446 aaPredicted RBP11.98□□□□□ -0.49
MARK3-207ENST00000553942 WWC1Q8IX03 1113 aa11.98□□□□□ -0.49
MARK3-207ENST00000553942 USP54Q70EL1 1684 aa11.97□□□□□ -0.49
MARK3-207ENST00000553942 TOM1L2Q6ZVM7 507 aa11.97□□□□□ -0.49
MARK3-207ENST00000553942 MIS18AQ9NYP9 233 aa11.97□□□□□ -0.49
MARK3-207ENST00000553942 EVA1CP58658 441 aa11.97□□□□□ -0.49
MARK3-207ENST00000553942 TSR2Q969E8 191 aaKnown RBP11.97□□□□□ -0.49
MARK3-207ENST00000553942 ABCA3Q99758 1704 aa11.96□□□□□ -0.49
MARK3-207ENST00000553942 PKNOX2Q96KN3 472 aa11.95□□□□□ -0.5
MARK3-207ENST00000553942 COL18A1P39060 1754 aa11.95□□□□□ -0.5
MARK3-207ENST00000553942 IQSEC2Q5JU85 1478 aa11.95□□□□□ -0.5
MARK3-207ENST00000553942 RGPD1P0DJD0 1748 aa11.94□□□□□ -0.5
MARK3-207ENST00000553942 ZNF521Q96K83 1311 aa11.93□□□□□ -0.5
MARK3-207ENST00000553942 RTL1A6NKG5 1358 aa11.93□□□□□ -0.5
MARK3-207ENST00000553942 NFE2L2Q16236 605 aa11.93□□□□□ -0.5
MARK3-207ENST00000553942 CCDC9Q9Y3X0 531 aaKnown RBP11.93□□□□□ -0.5
MARK3-207ENST00000553942 LRP6O75581 1613 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms