RNA–Protein interactions for RNA: ENST00000553835.5

PSMC1-203, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 3

Gene PSMC1, Length 390 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-203ENST00000553835 KNDC1Q76NI1 1749 aa13.88□□□□□ -0.19
PSMC1-203ENST00000553835 IFT172Q9UG01 1749 aa13.88□□□□□ -0.19
PSMC1-203ENST00000553835 PRDM10Q9NQV6 1147 aa13.88□□□□□ -0.19
PSMC1-203ENST00000553835 ANKARQ7Z5J8 1434 aa13.88□□□□□ -0.19
PSMC1-203ENST00000553835 RPGRIP1LQ68CZ1 1315 aa13.88□□□□□ -0.19
PSMC1-203ENST00000553835 DDB1Q16531 1140 aa13.87□□□□□ -0.19
PSMC1-203ENST00000553835 PMFBP1Q8TBY8 1022 aa13.87□□□□□ -0.19
PSMC1-203ENST00000553835 CD2APQ9Y5K6 639 aa13.87□□□□□ -0.19
PSMC1-203ENST00000553835 PNPLA7Q6ZV29 1317 aa13.87□□□□□ -0.19
PSMC1-203ENST00000553835 ACIN1Q9UKV3 1341 aaKnown RBP13.87□□□□□ -0.19
PSMC1-203ENST00000553835 NMRK2Q9NPI5 230 aa13.86□□□□□ -0.19
PSMC1-203ENST00000553835 CICQ96RK0 1608 aaPredicted RBP13.86□□□□□ -0.19
PSMC1-203ENST00000553835 BRD4O60885 1362 aaPredicted RBP13.85□□□□□ -0.19
PSMC1-203ENST00000553835 CPDO75976 1380 aa13.84□□□□□ -0.19
PSMC1-203ENST00000553835 GPRASP1Q5JY77 1395 aa13.84□□□□□ -0.19
PSMC1-203ENST00000553835 FAM50AQ14320 339 aaKnown RBP13.84□□□□□ -0.19
PSMC1-203ENST00000553835 LRRC4BQ9NT99 713 aa13.84□□□□□ -0.19
PSMC1-203ENST00000553835 USP19O94966 1318 aa13.84□□□□□ -0.19
PSMC1-203ENST00000553835 NUP155O75694 1391 aa13.83□□□□□ -0.19
PSMC1-203ENST00000553835 CRB1P82279 1406 aa13.83□□□□□ -0.2
PSMC1-203ENST00000553835 COL5A2P05997 1499 aaPredicted RBP13.83□□□□□ -0.2
PSMC1-203ENST00000553835 ZC3H6P61129 1189 aaKnown RBP13.83□□□□□ -0.2
PSMC1-203ENST00000553835 C10orf71Q711Q0 1435 aa13.82□□□□□ -0.2
PSMC1-203ENST00000553835 STK26Q9P289 416 aa13.82□□□□□ -0.2
PSMC1-203ENST00000553835 ABHD8Q96I13 439 aa13.81□□□□□ -0.2
PSMC1-203ENST00000553835 ANKRD30BQ9BXX2 1392 aa13.81□□□□□ -0.2
PSMC1-203ENST00000553835 TNRC18O15417 2968 aaPredicted RBP13.8□□□□□ -0.2
PSMC1-203ENST00000553835 KIF1BO60333 1816 aa13.79□□□□□ -0.2
PSMC1-203ENST00000553835 PPLO60437 1756 aa13.78□□□□□ -0.2
PSMC1-203ENST00000553835 NHSQ6T4R5 1651 aa13.78□□□□□ -0.2
PSMC1-203ENST00000553835 CDCA7Q9BWT1 371 aaPredicted RBP13.77□□□□□ -0.21
PSMC1-203ENST00000553835 YTHDC2Q9H6S0 1430 aaKnown RBP13.77□□□□□ -0.21
PSMC1-203ENST00000553835 FOXN1O15353 648 aa13.76□□□□□ -0.21
PSMC1-203ENST00000553835 ITGAEP38570 1179 aa13.76□□□□□ -0.21
PSMC1-203ENST00000553835 AKAP12Q02952 1782 aa13.76□□□□□ -0.21
PSMC1-203ENST00000553835 PDE4DIPQ5VU43 2346 aa13.75□□□□□ -0.21
PSMC1-203ENST00000553835 PXDNLA1KZ92 1463 aa13.75□□□□□ -0.21
PSMC1-203ENST00000553835 TUBGCP6Q96RT7 1819 aa13.74□□□□□ -0.21
PSMC1-203ENST00000553835 PRR36Q9H6K5 1346 aa13.74□□□□□ -0.21
PSMC1-203ENST00000553835 TMEM132EQ6IEE7 984 aa13.74□□□□□ -0.21
PSMC1-203ENST00000553835 ADGRF5Q8IZF2 1346 aa13.73□□□□□ -0.21
PSMC1-203ENST00000553835 SLC27A3Q5K4L6 730 aa13.73□□□□□ -0.21
PSMC1-203ENST00000553835 C16orf71Q8IYS4 520 aaPredicted RBP13.73□□□□□ -0.21
PSMC1-203ENST00000553835 SMC1BQ8NDV3 1235 aa13.73□□□□□ -0.21
PSMC1-203ENST00000553835 WNK3Q9BYP7 1800 aa13.73□□□□□ -0.21
PSMC1-203ENST00000553835 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
PSMC1-203ENST00000553835 IGSF1Q8N6C5 1336 aa13.71□□□□□ -0.21
PSMC1-203ENST00000553835 TFCP2L1Q9NZI6 479 aa13.71□□□□□ -0.21
PSMC1-203ENST00000553835 ROCK1Q13464 1354 aa13.71□□□□□ -0.22
PSMC1-203ENST00000553835 CTCFP49711 727 aaPredicted RBP13.7□□□□□ -0.22
PSMC1-203ENST00000553835 USP6P35125 1406 aa13.69□□□□□ -0.22
PSMC1-203ENST00000553835 TRPM1Q7Z4N2 1603 aa13.68□□□□□ -0.22
PSMC1-203ENST00000553835 COL23A1Q86Y22 540 aaPredicted RBP13.68□□□□□ -0.22
PSMC1-203ENST00000553835 BTAF1O14981 1849 aa13.68□□□□□ -0.22
PSMC1-203ENST00000553835 NGDNQ8NEJ9 315 aaKnown RBP13.67□□□□□ -0.22
PSMC1-203ENST00000553835 PIK3C2GO75747 1445 aa13.66□□□□□ -0.22
PSMC1-203ENST00000553835 EXOC5O00471 708 aa13.66□□□□□ -0.22
PSMC1-203ENST00000553835 HIRIP3Q9BW71 556 aaPredicted RBP13.66□□□□□ -0.22
PSMC1-203ENST00000553835 TRIM26Q12899 539 aaPredicted RBP13.65□□□□□ -0.22
PSMC1-203ENST00000553835 NUTM2GQ5VZR2 741 aa13.65□□□□□ -0.22
PSMC1-203ENST00000553835 EIF3AQ14152 1382 aaKnown RBP13.65□□□□□ -0.22
PSMC1-203ENST00000553835 PLEKHG2Q9H7P9 1386 aa13.65□□□□□ -0.22
PSMC1-203ENST00000553835 WDR17Q8IZU2 1322 aa13.64□□□□□ -0.23
PSMC1-203ENST00000553835 GCP02774 474 aa13.64□□□□□ -0.23
PSMC1-203ENST00000553835 TOM1L2Q6ZVM7 507 aa13.64□□□□□ -0.23
PSMC1-203ENST00000553835 PRAM1Q96QH2 718 aa13.64□□□□□ -0.23
PSMC1-203ENST00000553835 CCDC85CA6NKD9 419 aa13.63□□□□□ -0.23
PSMC1-203ENST00000553835 ACSBG1Q96GR2 724 aa13.63□□□□□ -0.23
PSMC1-203ENST00000553835 KCPQ6ZWJ8 1503 aa13.63□□□□□ -0.23
PSMC1-203ENST00000553835 KDM2BQ8NHM5 1336 aa13.63□□□□□ -0.23
PSMC1-203ENST00000553835 LBX1P52954 281 aa13.62□□□□□ -0.23
PSMC1-203ENST00000553835 MSL1Q68DK7 614 aa13.62□□□□□ -0.23
PSMC1-203ENST00000553835 RRAGCQ9HB90 399 aa13.62□□□□□ -0.23
PSMC1-203ENST00000553835 COL18A1P39060 1754 aa13.61□□□□□ -0.23
PSMC1-203ENST00000553835 ABCC6O95255 1503 aa13.61□□□□□ -0.23
PSMC1-203ENST00000553835 TNRC6CQ9HCJ0 1690 aaKnown RBP13.61□□□□□ -0.23
PSMC1-203ENST00000553835 CARD10Q9BWT7 1032 aa13.61□□□□□ -0.23
PSMC1-203ENST00000553835 WBP1LQ9NX94 342 aa13.61□□□□□ -0.23
PSMC1-203ENST00000553835 POLR3AO14802 1390 aaPredicted RBP13.6□□□□□ -0.23
PSMC1-203ENST00000553835 C14orf93Q9H972 538 aaKnown RBP13.6□□□□□ -0.23
PSMC1-203ENST00000553835 QRICH2Q9H0J4 1663 aa13.59□□□□□ -0.23
PSMC1-203ENST00000553835 SAFB2Q14151 953 aaKnown RBP eCLIP13.59□□□□□ -0.23
PSMC1-203ENST00000553835 CREBZFQ9NS37 354 aa13.59□□□□□ -0.23
PSMC1-203ENST00000553835 WASLO00401 505 aaPredicted RBP13.58□□□□□ -0.24
PSMC1-203ENST00000553835 HSPA8P11142 646 aaKnown RBP13.58□□□□□ -0.24
PSMC1-203ENST00000553835 AXIN2Q9Y2T1 843 aa13.58□□□□□ -0.24
PSMC1-203ENST00000553835 KCNQ4P56696 695 aa13.57□□□□□ -0.24
PSMC1-203ENST00000553835 PRPF38BQ5VTL8 546 aaKnown RBP13.57□□□□□ -0.24
PSMC1-203ENST00000553835 C9orf131Q5VYM1 1079 aa13.57□□□□□ -0.24
PSMC1-203ENST00000553835 AIDAQ96BJ3 306 aa13.57□□□□□ -0.24
PSMC1-203ENST00000553835 CNTNAP1P78357 1384 aa13.57□□□□□ -0.24
PSMC1-203ENST00000553835 ABTB2Q8N961 1025 aa13.56□□□□□ -0.24
PSMC1-203ENST00000553835 MKRN1Q9UHC7 482 aaKnown RBP13.56□□□□□ -0.24
PSMC1-203ENST00000553835 LY75O60449 1722 aa13.56□□□□□ -0.24
PSMC1-203ENST00000553835 PIK3C2AO00443 1686 aa13.55□□□□□ -0.24
PSMC1-203ENST00000553835 PKD1L3Q7Z443 1732 aa13.55□□□□□ -0.24
PSMC1-203ENST00000553835 KIAA1551Q9HCM1 1747 aa13.55□□□□□ -0.24
PSMC1-203ENST00000553835 SPATA31E1Q6ZUB1 1445 aa13.55□□□□□ -0.24
PSMC1-203ENST00000553835 NLRP13Q86W25 1043 aa13.54□□□□□ -0.24
PSMC1-203ENST00000553835 CCDC7Q96M83 1385 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms