RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 IP6K1Q92551 441 aa18.23■□□□□ 0.51
APEX1-205ENST00000553555 RGPD1P0DJD0 1748 aa18.22■□□□□ 0.51
APEX1-205ENST00000553555 FCHSD2O94868 740 aa18.21■□□□□ 0.51
APEX1-205ENST00000553555 CERKQ8TCT0 537 aa18.21■□□□□ 0.51
APEX1-205ENST00000553555 CABLES1Q8TDN4 633 aa18.21■□□□□ 0.51
APEX1-205ENST00000553555 RGPD5Q99666 1765 aa18.2■□□□□ 0.5
APEX1-205ENST00000553555 APAF1O14727 1248 aa18.2■□□□□ 0.5
APEX1-205ENST00000553555 PLEKHF1Q96S99 279 aa18.2■□□□□ 0.5
APEX1-205ENST00000553555 PNNQ9H307 717 aaKnown RBP18.2■□□□□ 0.5
APEX1-205ENST00000553555 UBAP1LF5GYI3 381 aa18.2■□□□□ 0.5
APEX1-205ENST00000553555 LRRC59Q96AG4 307 aaKnown RBP18.2■□□□□ 0.5
APEX1-205ENST00000553555 SALL2Q9Y467 1007 aaPredicted RBP18.2■□□□□ 0.5
APEX1-205ENST00000553555 PHLPP1O60346 1717 aa18.19■□□□□ 0.5
APEX1-205ENST00000553555 ZBTB7CA1YPR0 619 aa18.19■□□□□ 0.5
APEX1-205ENST00000553555 ZC3H6P61129 1189 aaKnown RBP18.19■□□□□ 0.5
APEX1-205ENST00000553555 RSPH6AQ9H0K4 717 aa18.19■□□□□ 0.5
APEX1-205ENST00000553555 ABCA3Q99758 1704 aa18.19■□□□□ 0.5
APEX1-205ENST00000553555 COL18A1P39060 1754 aa18.18■□□□□ 0.5
APEX1-205ENST00000553555 PIP4K2BP78356 416 aa18.18■□□□□ 0.5
APEX1-205ENST00000553555 HMOX1P09601 288 aa18.17■□□□□ 0.5
APEX1-205ENST00000553555 TCP11L2Q8N4U5 519 aa18.17■□□□□ 0.5
APEX1-205ENST00000553555 NGEFQ8N5V2 710 aa18.17■□□□□ 0.5
APEX1-205ENST00000553555 EYA1Q99502 592 aa18.16■□□□□ 0.5
APEX1-205ENST00000553555 RGPD2P0DJD1 1756 aa18.15■□□□□ 0.5
APEX1-205ENST00000553555 COL16A1Q07092 1604 aaPredicted RBP18.15■□□□□ 0.5
APEX1-205ENST00000553555 PRKAR2BP31323 418 aa18.15■□□□□ 0.5
APEX1-205ENST00000553555 CPDO75976 1380 aa18.15■□□□□ 0.5
APEX1-205ENST00000553555 NCBP3Q53F19 620 aaKnown RBP18.14■□□□□ 0.49
APEX1-205ENST00000553555 SULT6B1Q6IMI4 303 aa18.14■□□□□ 0.49
APEX1-205ENST00000553555 LTV1Q96GA3 475 aaPredicted RBP18.14■□□□□ 0.49
APEX1-205ENST00000553555 AXIN2Q9Y2T1 843 aa18.14■□□□□ 0.49
APEX1-205ENST00000553555 COL22A1Q8NFW1 1626 aaPredicted RBP18.14■□□□□ 0.49
APEX1-205ENST00000553555 IGSF1Q8N6C5 1336 aa18.14■□□□□ 0.49
APEX1-205ENST00000553555 MAPK8IP3Q9UPT6 1336 aa18.14■□□□□ 0.49
APEX1-205ENST00000553555 ABCC6O95255 1503 aa18.13■□□□□ 0.49
APEX1-205ENST00000553555 ZNF521Q96K83 1311 aa18.13■□□□□ 0.49
APEX1-205ENST00000553555 PDE3BQ13370 1112 aa18.12■□□□□ 0.49
APEX1-205ENST00000553555 AEBP1Q8IUX7 1158 aa18.12■□□□□ 0.49
APEX1-205ENST00000553555 KIAA0232Q92628 1395 aa18.12■□□□□ 0.49
APEX1-205ENST00000553555 NEFMP07197 916 aa18.12■□□□□ 0.49
APEX1-205ENST00000553555 DLG5Q8TDM6 1919 aa18.11■□□□□ 0.49
APEX1-205ENST00000553555 TMPOP42166 694 aaKnown RBP18.11■□□□□ 0.49
APEX1-205ENST00000553555 HAP1P54257 671 aaPredicted RBP18.11■□□□□ 0.49
APEX1-205ENST00000553555 NEUROD2Q15784 382 aa18.11■□□□□ 0.49
APEX1-205ENST00000553555 PHACTR3Q96KR7 559 aa18.11■□□□□ 0.49
APEX1-205ENST00000553555 RRP7AQ9Y3A4 280 aaKnown RBP18.11■□□□□ 0.49
APEX1-205ENST00000553555 KDRP35968 1356 aa18.11■□□□□ 0.49
APEX1-205ENST00000553555 CCDC27Q2M243 656 aa18.1■□□□□ 0.49
APEX1-205ENST00000553555 ANKRD24Q8TF21 1146 aa18.1■□□□□ 0.49
APEX1-205ENST00000553555 PHF23Q9BUL5 403 aaPredicted RBP18.1■□□□□ 0.49
APEX1-205ENST00000553555 CHRNA2Q15822 529 aa18.09■□□□□ 0.49
APEX1-205ENST00000553555 NBPF6Q5VWK0 638 aa18.09■□□□□ 0.49
APEX1-205ENST00000553555 WWC1Q8IX03 1113 aa18.09■□□□□ 0.49
APEX1-205ENST00000553555 NBPF4Q96M43 638 aa18.09■□□□□ 0.49
APEX1-205ENST00000553555 PRDM11Q9NQV5 511 aa18.08■□□□□ 0.48
APEX1-205ENST00000553555 LMO7Q8WWI1 1683 aa18.07■□□□□ 0.48
APEX1-205ENST00000553555 CAMTA1Q9Y6Y1 1673 aa18.07■□□□□ 0.48
APEX1-205ENST00000553555 RIPK4P57078 832 aa18.07■□□□□ 0.48
APEX1-205ENST00000553555 NFE2L2Q16236 605 aa18.07■□□□□ 0.48
APEX1-205ENST00000553555 CDCA7LQ96GN5 454 aa18.07■□□□□ 0.48
APEX1-205ENST00000553555 ERBB3P21860 1342 aa18.07■□□□□ 0.48
APEX1-205ENST00000553555 GOLGA2Q08379 1002 aa18.06■□□□□ 0.48
APEX1-205ENST00000553555 FAM208AQ9UK61 1670 aaKnown RBP18.06■□□□□ 0.48
APEX1-205ENST00000553555 TRIM35Q9UPQ4 493 aa18.05■□□□□ 0.48
APEX1-205ENST00000553555 NCAPD2Q15021 1401 aa18.05■□□□□ 0.48
APEX1-205ENST00000553555 USHBP1Q8N6Y0 703 aa18.05■□□□□ 0.48
APEX1-205ENST00000553555 FAM83GA6ND36 823 aa18.04■□□□□ 0.48
APEX1-205ENST00000553555 WDR63Q8IWG1 891 aa18.04■□□□□ 0.48
APEX1-205ENST00000553555 SLFN5Q08AF3 891 aa18.03■□□□□ 0.48
APEX1-205ENST00000553555 COL14A1Q05707 1796 aaKnown RBP18.02■□□□□ 0.47
APEX1-205ENST00000553555 TRMT2AQ8IZ69 625 aaKnown RBP18.01■□□□□ 0.47
APEX1-205ENST00000553555 SPINK5Q9NQ38 1064 aaPredicted RBP18.01■□□□□ 0.47
APEX1-205ENST00000553555 E9PSI1 815 aa18■□□□□ 0.47
APEX1-205ENST00000553555 CSB-PGBD3P0DP91 1061 aa18■□□□□ 0.47
APEX1-205ENST00000553555 MTHFSDQ2M296 383 aaKnown RBP18■□□□□ 0.47
APEX1-205ENST00000553555 NLRP2Q9NX02 1062 aa18■□□□□ 0.47
APEX1-205ENST00000553555 COL5A2P05997 1499 aaPredicted RBP17.99■□□□□ 0.47
APEX1-205ENST00000553555 DUSP27Q5VZP5 1158 aa17.99■□□□□ 0.47
APEX1-205ENST00000553555 WDR17Q8IZU2 1322 aa17.98■□□□□ 0.47
APEX1-205ENST00000553555 LMOD3Q0VAK6 560 aa17.98■□□□□ 0.47
APEX1-205ENST00000553555 GAS2L2Q8NHY3 880 aa17.98■□□□□ 0.47
APEX1-205ENST00000553555 JCADQ9P266 1359 aa17.98■□□□□ 0.47
APEX1-205ENST00000553555 IL16Q14005 1332 aa17.97■□□□□ 0.47
APEX1-205ENST00000553555 EVA1CP58658 441 aa17.95■□□□□ 0.46
APEX1-205ENST00000553555 BTG4Q9NY30 223 aa17.95■□□□□ 0.46
APEX1-205ENST00000553555 PLCH1Q4KWH8 1693 aa17.95■□□□□ 0.46
APEX1-205ENST00000553555 NUTM2BA6NNL0 878 aaPredicted RBP17.94■□□□□ 0.46
APEX1-205ENST00000553555 NUTM2EB1AL46 878 aaPredicted RBP17.94■□□□□ 0.46
APEX1-205ENST00000553555 PLEKHO1Q53GL0 409 aaPredicted RBP17.94■□□□□ 0.46
APEX1-205ENST00000553555 TOM1L2Q6ZVM7 507 aa17.94■□□□□ 0.46
APEX1-205ENST00000553555 NUTM2AQ8IVF1 878 aaPredicted RBP17.94■□□□□ 0.46
APEX1-205ENST00000553555 ADAMTS2O95450 1211 aa17.94■□□□□ 0.46
APEX1-205ENST00000553555 HSPA1LP34931 641 aa17.94■□□□□ 0.46
APEX1-205ENST00000553555 AMOTQ4VCS5 1084 aa17.94■□□□□ 0.46
APEX1-205ENST00000553555 CARD10Q9BWT7 1032 aa17.94■□□□□ 0.46
APEX1-205ENST00000553555 STRN4Q9NRL3 753 aa17.94■□□□□ 0.46
APEX1-205ENST00000553555 VIRMAQ69YN4 1812 aaKnown RBP17.93■□□□□ 0.46
APEX1-205ENST00000553555 HTATSF1O43719 755 aaKnown RBP17.93■□□□□ 0.46
APEX1-205ENST00000553555 CALD1Q05682 793 aaKnown RBP17.93■□□□□ 0.46
APEX1-205ENST00000553555 RAPGEF4Q8WZA2 1011 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms