RNA–Protein interactions for RNA: ENST00000553521.5

SRSF5-203, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 2,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-203ENST00000553521 C1orf167Q5SNV9 1468 aa19.73■□□□□ 0.75
SRSF5-203ENST00000553521 ORAI2Q96SN7 254 aa19.73■□□□□ 0.75
SRSF5-203ENST00000553521 SOX12O15370 315 aa19.73■□□□□ 0.75
SRSF5-203ENST00000553521 ATF3P18847 181 aa19.73■□□□□ 0.75
SRSF5-203ENST00000553521 AMPHP49418 695 aa19.72■□□□□ 0.75
SRSF5-203ENST00000553521 MARF1Q9Y4F3 1742 aaKnown RBP19.72■□□□□ 0.75
SRSF5-203ENST00000553521 KIF1AQ12756 1690 aa19.72■□□□□ 0.75
SRSF5-203ENST00000553521 PHACTR3Q96KR7 559 aa19.72■□□□□ 0.75
SRSF5-203ENST00000553521 STRCP1A6NGW2 1772 aa19.72■□□□□ 0.75
SRSF5-203ENST00000553521 CT47B1P0C2W7 299 aaPredicted RBP19.71■□□□□ 0.75
SRSF5-203ENST00000553521 PLIN1O60240 522 aa19.71■□□□□ 0.74
SRSF5-203ENST00000553521 CALD1Q05682 793 aaKnown RBP19.71■□□□□ 0.74
SRSF5-203ENST00000553521 B4GALNT3Q6L9W6 998 aa19.71■□□□□ 0.74
SRSF5-203ENST00000553521 LMOD3Q0VAK6 560 aa19.7■□□□□ 0.74
SRSF5-203ENST00000553521 ARHGEF10O15013 1369 aa19.7■□□□□ 0.74
SRSF5-203ENST00000553521 NUTM2GQ5VZR2 741 aa19.7■□□□□ 0.74
SRSF5-203ENST00000553521 RGPD1P0DJD0 1748 aa19.69■□□□□ 0.74
SRSF5-203ENST00000553521 FOXO3O43524 673 aa19.69■□□□□ 0.74
SRSF5-203ENST00000553521 SULT6B1Q6IMI4 303 aa19.69■□□□□ 0.74
SRSF5-203ENST00000553521 KCNH5Q8NCM2 988 aa19.69■□□□□ 0.74
SRSF5-203ENST00000553521 EXOC6Q8TAG9 804 aa19.69■□□□□ 0.74
SRSF5-203ENST00000553521 CADPS2Q86UW7 1296 aa19.69■□□□□ 0.74
SRSF5-203ENST00000553521 CCDC136Q96JN2 1154 aa19.69■□□□□ 0.74
SRSF5-203ENST00000553521 RTL1A6NKG5 1358 aa19.68■□□□□ 0.74
SRSF5-203ENST00000553521 STRCQ7RTU9 1775 aa19.68■□□□□ 0.74
SRSF5-203ENST00000553521 MST1RQ04912 1400 aa19.68■□□□□ 0.74
SRSF5-203ENST00000553521 FANCIQ9NVI1 1328 aa19.67■□□□□ 0.74
SRSF5-203ENST00000553521 HOXC9P31274 260 aa19.67■□□□□ 0.74
SRSF5-203ENST00000553521 KRT28Q7Z3Y7 464 aa19.66■□□□□ 0.74
SRSF5-203ENST00000553521 MSH6P52701 1360 aa19.66■□□□□ 0.74
SRSF5-203ENST00000553521 BCAR3O75815 825 aa19.65■□□□□ 0.74
SRSF5-203ENST00000553521 RARSP54136 660 aaKnown RBP19.65■□□□□ 0.74
SRSF5-203ENST00000553521 AEBP1Q8IUX7 1158 aa19.65■□□□□ 0.74
SRSF5-203ENST00000553521 IGSF1Q8N6C5 1336 aa19.64■□□□□ 0.74
SRSF5-203ENST00000553521 CRBNQ96SW2 442 aa19.64■□□□□ 0.73
SRSF5-203ENST00000553521 KDRP35968 1356 aa19.64■□□□□ 0.73
SRSF5-203ENST00000553521 NFAT5O94916 1531 aa19.64■□□□□ 0.73
SRSF5-203ENST00000553521 TRPM3Q9HCF6 1732 aaPredicted RBP19.63■□□□□ 0.73
SRSF5-203ENST00000553521 IP6K1Q92551 441 aa19.62■□□□□ 0.73
SRSF5-203ENST00000553521 TSR2Q969E8 191 aaKnown RBP19.62■□□□□ 0.73
SRSF5-203ENST00000553521 PDE3AQ14432 1141 aa19.62■□□□□ 0.73
SRSF5-203ENST00000553521 EYA1Q99502 592 aa19.62■□□□□ 0.73
SRSF5-203ENST00000553521 C20orf194Q5TEA3 1177 aa19.61■□□□□ 0.73
SRSF5-203ENST00000553521 SLIT3O75094 1523 aa19.61■□□□□ 0.73
SRSF5-203ENST00000553521 GNAI1P63096 354 aa19.61■□□□□ 0.73
SRSF5-203ENST00000553521 IFT57Q9NWB7 429 aa19.61■□□□□ 0.73
SRSF5-203ENST00000553521 EXOSC9Q06265 439 aaKnown RBP19.61■□□□□ 0.73
SRSF5-203ENST00000553521 USP19O94966 1318 aa19.6■□□□□ 0.73
SRSF5-203ENST00000553521 XPCQ01831 940 aaPredicted RBP19.6■□□□□ 0.73
SRSF5-203ENST00000553521 PHRF1Q9P1Y6 1649 aaKnown RBP19.59■□□□□ 0.73
SRSF5-203ENST00000553521 GCP02774 474 aa19.59■□□□□ 0.73
SRSF5-203ENST00000553521 ZNF853P0CG23 659 aa19.58■□□□□ 0.73
SRSF5-203ENST00000553521 NPHP3Q7Z494 1330 aa19.58■□□□□ 0.73
SRSF5-203ENST00000553521 LTN1O94822 1766 aa19.58■□□□□ 0.72
SRSF5-203ENST00000553521 DLG5Q8TDM6 1919 aa19.58■□□□□ 0.72
SRSF5-203ENST00000553521 CANXP27824 592 aaKnown RBP19.57■□□□□ 0.72
SRSF5-203ENST00000553521 ZNF428Q96B54 188 aa19.57■□□□□ 0.72
SRSF5-203ENST00000553521 CFAP44Q96MT7 982 aa19.57■□□□□ 0.72
SRSF5-203ENST00000553521 XIRP1Q702N8 1843 aaKnown RBP19.56■□□□□ 0.72
SRSF5-203ENST00000553521 LMOD2Q6P5Q4 547 aa19.56■□□□□ 0.72
SRSF5-203ENST00000553521 ARHGEF25Q86VW2 580 aa19.56■□□□□ 0.72
SRSF5-203ENST00000553521 GAS2L2Q8NHY3 880 aa19.56■□□□□ 0.72
SRSF5-203ENST00000553521 THUMPD2Q9BTF0 503 aaKnown RBP19.55■□□□□ 0.72
SRSF5-203ENST00000553521 ALS2Q96Q42 1657 aa19.55■□□□□ 0.72
SRSF5-203ENST00000553521 ZNF335Q9H4Z2 1342 aaPredicted RBP19.55■□□□□ 0.72
SRSF5-203ENST00000553521 LAS1LQ9Y4W2 734 aaKnown RBP19.55■□□□□ 0.72
SRSF5-203ENST00000553521 ERICH6Q7L0X2 663 aa19.54■□□□□ 0.72
SRSF5-203ENST00000553521 MS4A1P11836 297 aa19.53■□□□□ 0.72
SRSF5-203ENST00000553521 ALDH1L2Q3SY69 923 aa19.53■□□□□ 0.72
SRSF5-203ENST00000553521 FRAT1Q92837 279 aaPredicted RBP19.53■□□□□ 0.72
SRSF5-203ENST00000553521 FAM83GA6ND36 823 aa19.52■□□□□ 0.72
SRSF5-203ENST00000553521 HTATSF1O43719 755 aaKnown RBP19.52■□□□□ 0.72
SRSF5-203ENST00000553521 MTHFSDQ2M296 383 aaKnown RBP19.52■□□□□ 0.72
SRSF5-203ENST00000553521 LTV1Q96GA3 475 aaPredicted RBP19.52■□□□□ 0.72
SRSF5-203ENST00000553521 AAMPQ13685 434 aa19.52■□□□□ 0.71
SRSF5-203ENST00000553521 MBIPQ9NS73 344 aa19.52■□□□□ 0.71
SRSF5-203ENST00000553521 TSHZ2Q9NRE2 1034 aa19.51■□□□□ 0.71
SRSF5-203ENST00000553521 SMC4Q9NTJ3 1288 aa19.51■□□□□ 0.71
SRSF5-203ENST00000553521 RTF1Q92541 710 aaKnown RBP19.51■□□□□ 0.71
SRSF5-203ENST00000553521 DCTN1Q14203 1278 aa19.5■□□□□ 0.71
SRSF5-203ENST00000553521 ZKSCAN2Q63HK3 967 aa19.5■□□□□ 0.71
SRSF5-203ENST00000553521 SSH1Q8WYL5 1049 aa19.5■□□□□ 0.71
SRSF5-203ENST00000553521 BCL2L13Q9BXK5 485 aa19.5■□□□□ 0.71
SRSF5-203ENST00000553521 TNS3Q68CZ2 1445 aa19.5■□□□□ 0.71
SRSF5-203ENST00000553521 PXDNQ92626 1479 aa19.49■□□□□ 0.71
SRSF5-203ENST00000553521 BRPF1P55201 1214 aaPredicted RBP19.49■□□□□ 0.71
SRSF5-203ENST00000553521 BRINP3Q76B58 766 aa19.49■□□□□ 0.71
SRSF5-203ENST00000553521 ZBTB7CA1YPR0 619 aa19.48■□□□□ 0.71
SRSF5-203ENST00000553521 CHL1O00533 1208 aa19.48■□□□□ 0.71
SRSF5-203ENST00000553521 SLAIN2Q9P270 581 aa19.48■□□□□ 0.71
SRSF5-203ENST00000553521 SPATA31A3Q5VYP0 1347 aa19.48■□□□□ 0.71
SRSF5-203ENST00000553521 KIF16BQ96L93 1317 aa19.48■□□□□ 0.71
SRSF5-203ENST00000553521 VAMP4O75379 141 aa19.47■□□□□ 0.71
SRSF5-203ENST00000553521 DDX17Q92841 729 aaKnown RBP19.47■□□□□ 0.71
SRSF5-203ENST00000553521 MED1Q15648 1581 aaPredicted RBP19.47■□□□□ 0.71
SRSF5-203ENST00000553521 NBPF6Q5VWK0 638 aa19.47■□□□□ 0.71
SRSF5-203ENST00000553521 MCM10Q7L590 875 aa19.47■□□□□ 0.71
SRSF5-203ENST00000553521 PANK1Q8TE04 598 aa19.47■□□□□ 0.71
SRSF5-203ENST00000553521 NBPF4Q96M43 638 aa19.47■□□□□ 0.71
SRSF5-203ENST00000553521 IPO8O15397 1037 aaKnown RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms