RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 EVC2Q86UK5 1308 aa14.19□□□□□ -0.14
ACTN1-208ENST00000553370 DISP2A7MBM2 1401 aa14.19□□□□□ -0.14
ACTN1-208ENST00000553370 APBA3O96018 575 aa14.19□□□□□ -0.14
ACTN1-208ENST00000553370 LARP1Q6PKG0 1096 aaKnown RBP14.19□□□□□ -0.14
ACTN1-208ENST00000553370 BRD4O60885 1362 aaPredicted RBP14.19□□□□□ -0.14
ACTN1-208ENST00000553370 ROCK2O75116 1388 aaKnown RBP14.19□□□□□ -0.14
ACTN1-208ENST00000553370 USP6P35125 1406 aa14.18□□□□□ -0.14
ACTN1-208ENST00000553370 NLRP6P59044 892 aa14.18□□□□□ -0.14
ACTN1-208ENST00000553370 EZH2Q15910 746 aaKnown RBP14.18□□□□□ -0.14
ACTN1-208ENST00000553370 COL5A2P05997 1499 aaPredicted RBP14.18□□□□□ -0.14
ACTN1-208ENST00000553370 GCP02774 474 aa14.17□□□□□ -0.14
ACTN1-208ENST00000553370 NEUROD1Q13562 356 aa14.17□□□□□ -0.14
ACTN1-208ENST00000553370 BARGINQ6ZT62 677 aa14.17□□□□□ -0.14
ACTN1-208ENST00000553370 CABP1Q9NZU7 370 aa14.17□□□□□ -0.14
ACTN1-208ENST00000553370 PARD3Q8TEW0 1356 aa14.17□□□□□ -0.14
ACTN1-208ENST00000553370 CRB1P82279 1406 aa14.16□□□□□ -0.14
ACTN1-208ENST00000553370 LRRC37A3O60309 1634 aa14.16□□□□□ -0.14
ACTN1-208ENST00000553370 SOX12O15370 315 aa14.16□□□□□ -0.14
ACTN1-208ENST00000553370 THRAP3Q9Y2W1 955 aaKnown RBP14.16□□□□□ -0.14
ACTN1-208ENST00000553370 SLIT3O75094 1523 aa14.15□□□□□ -0.14
ACTN1-208ENST00000553370 NBPF14Q5TI25 921 aa14.15□□□□□ -0.14
ACTN1-208ENST00000553370 TOM1L2Q6ZVM7 507 aa14.15□□□□□ -0.14
ACTN1-208ENST00000553370 L3MBTL2Q969R5 705 aa14.15□□□□□ -0.14
ACTN1-208ENST00000553370 LTN1O94822 1766 aa14.14□□□□□ -0.15
ACTN1-208ENST00000553370 MON2Q7Z3U7 1717 aa14.14□□□□□ -0.15
ACTN1-208ENST00000553370 OVOS2A0A0G2JMS6 1433 aa14.14□□□□□ -0.15
ACTN1-208ENST00000553370 OVOS2A0A0J9YW53 1432 aa14.14□□□□□ -0.15
ACTN1-208ENST00000553370 OVOS2Q6IE36 1432 aa14.14□□□□□ -0.15
ACTN1-208ENST00000553370 RGPD3A6NKT7 1758 aaPredicted RBP14.14□□□□□ -0.15
ACTN1-208ENST00000553370 RGPD4Q7Z3J3 1758 aa14.14□□□□□ -0.15
ACTN1-208ENST00000553370 CSB-PGBD3P0DP91 1061 aa14.13□□□□□ -0.15
ACTN1-208ENST00000553370 MKRN4PQ13434 485 aaPredicted RBP14.13□□□□□ -0.15
ACTN1-208ENST00000553370 COL18A1P39060 1754 aa14.13□□□□□ -0.15
ACTN1-208ENST00000553370 C11orf95C9JLR9 678 aaPredicted RBP14.12□□□□□ -0.15
ACTN1-208ENST00000553370 CAMKK2Q96RR4 588 aa14.12□□□□□ -0.15
ACTN1-208ENST00000553370 AATKQ6ZMQ8 1374 aa14.11□□□□□ -0.15
ACTN1-208ENST00000553370 CAPN15O75808 1086 aa14.11□□□□□ -0.15
ACTN1-208ENST00000553370 CPSF1Q10570 1443 aaKnown RBP14.11□□□□□ -0.15
ACTN1-208ENST00000553370 DDB1Q16531 1140 aa14.11□□□□□ -0.15
ACTN1-208ENST00000553370 SIN3AQ96ST3 1273 aa14.11□□□□□ -0.15
ACTN1-208ENST00000553370 SPINK5Q9NQ38 1064 aaPredicted RBP14.11□□□□□ -0.15
ACTN1-208ENST00000553370 KTN1Q86UP2 1357 aaKnown RBP14.1□□□□□ -0.15
ACTN1-208ENST00000553370 PEAK1Q9H792 1746 aa14.1□□□□□ -0.15
ACTN1-208ENST00000553370 KCNH5Q8NCM2 988 aa14.1□□□□□ -0.15
ACTN1-208ENST00000553370 PPP1R1BQ9UD71 204 aaPredicted RBP14.1□□□□□ -0.15
ACTN1-208ENST00000553370 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
ACTN1-208ENST00000553370 TTC21AQ8NDW8 1320 aa14.09□□□□□ -0.15
ACTN1-208ENST00000553370 TTC21BQ7Z4L5 1316 aa14.08□□□□□ -0.16
ACTN1-208ENST00000553370 WDR17Q8IZU2 1322 aa14.08□□□□□ -0.16
ACTN1-208ENST00000553370 PROM2Q8N271 834 aa14.07□□□□□ -0.16
ACTN1-208ENST00000553370 CDCA7Q9BWT1 371 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-208ENST00000553370 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.06□□□□□ -0.16
ACTN1-208ENST00000553370 TMC1Q8TDI8 760 aa14.06□□□□□ -0.16
ACTN1-208ENST00000553370 TONSLQ96HA7 1378 aa14.06□□□□□ -0.16
ACTN1-208ENST00000553370 ABCC6O95255 1503 aa14.05□□□□□ -0.16
ACTN1-208ENST00000553370 CARD11Q9BXL7 1154 aa14.05□□□□□ -0.16
ACTN1-208ENST00000553370 NFAT5O94916 1531 aa14.05□□□□□ -0.16
ACTN1-208ENST00000553370 USP54Q70EL1 1684 aa14.04□□□□□ -0.16
ACTN1-208ENST00000553370 VASPP50552 380 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-208ENST00000553370 HDGFL2Q7Z4V5 671 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-208ENST00000553370 BCL11BQ9C0K0 894 aaPredicted RBP14.04□□□□□ -0.16
ACTN1-208ENST00000553370 SPON1Q9HCB6 807 aa14.03□□□□□ -0.16
ACTN1-208ENST00000553370 CCDC7Q96M83 1385 aa14.03□□□□□ -0.16
ACTN1-208ENST00000553370 FAM208AQ9UK61 1670 aaKnown RBP14.03□□□□□ -0.16
ACTN1-208ENST00000553370 NHSQ6T4R5 1651 aa14.02□□□□□ -0.16
ACTN1-208ENST00000553370 ARHGEF25Q86VW2 580 aa14.02□□□□□ -0.17
ACTN1-208ENST00000553370 AXIN2Q9Y2T1 843 aa14.02□□□□□ -0.17
ACTN1-208ENST00000553370 EXOC5O00471 708 aa14.01□□□□□ -0.17
ACTN1-208ENST00000553370 CARD10Q9BWT7 1032 aa14.01□□□□□ -0.17
ACTN1-208ENST00000553370 NLRP2Q9NX02 1062 aa14.01□□□□□ -0.17
ACTN1-208ENST00000553370 BTAF1O14981 1849 aa14.01□□□□□ -0.17
ACTN1-208ENST00000553370 CASZ1Q86V15 1759 aa14.01□□□□□ -0.17
ACTN1-208ENST00000553370 TNS2Q63HR2 1409 aa14□□□□□ -0.17
ACTN1-208ENST00000553370 SBNO2Q9Y2G9 1366 aa14□□□□□ -0.17
ACTN1-208ENST00000553370 TERF2IPQ9NYB0 399 aa14□□□□□ -0.17
ACTN1-208ENST00000553370 KCNQ2O43526 872 aa13.99□□□□□ -0.17
ACTN1-208ENST00000553370 POLA2Q14181 598 aa13.99□□□□□ -0.17
ACTN1-208ENST00000553370 MARCH10Q8NA82 808 aaPredicted RBP13.99□□□□□ -0.17
ACTN1-208ENST00000553370 PLSCR1O15162 318 aa13.98□□□□□ -0.17
ACTN1-208ENST00000553370 NME9Q86XW9 330 aa13.98□□□□□ -0.17
ACTN1-208ENST00000553370 STK32BQ9NY57 414 aa13.98□□□□□ -0.17
ACTN1-208ENST00000553370 EDC4Q6P2E9 1401 aaKnown RBP13.98□□□□□ -0.17
ACTN1-208ENST00000553370 MYOM1P52179 1685 aa13.97□□□□□ -0.17
ACTN1-208ENST00000553370 NINLQ9Y2I6 1382 aa13.96□□□□□ -0.17
ACTN1-208ENST00000553370 RGPD2P0DJD1 1756 aa13.96□□□□□ -0.17
ACTN1-208ENST00000553370 ANO8Q9HCE9 1232 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-208ENST00000553370 CHD4Q14839 1912 aa13.96□□□□□ -0.18
ACTN1-208ENST00000553370 USP31Q70CQ4 1352 aa13.96□□□□□ -0.18
ACTN1-208ENST00000553370 ERBB3P21860 1342 aa13.95□□□□□ -0.18
ACTN1-208ENST00000553370 KIF20BQ96Q89 1820 aa13.95□□□□□ -0.18
ACTN1-208ENST00000553370 IL2RBP14784 551 aa13.95□□□□□ -0.18
ACTN1-208ENST00000553370 PTF1AQ7RTS3 328 aa13.95□□□□□ -0.18
ACTN1-208ENST00000553370 ANKRD24Q8TF21 1146 aa13.95□□□□□ -0.18
ACTN1-208ENST00000553370 ACSBG1Q96GR2 724 aa13.95□□□□□ -0.18
ACTN1-208ENST00000553370 BCL9O00512 1426 aa13.95□□□□□ -0.18
ACTN1-208ENST00000553370 A0A1W2PP64 1363 aa13.95□□□□□ -0.18
ACTN1-208ENST00000553370 CD163L1Q9NR16 1453 aa13.94□□□□□ -0.18
ACTN1-208ENST00000553370 ZBTB7AO95365 584 aa13.94□□□□□ -0.18
ACTN1-208ENST00000553370 YY1P25490 414 aa13.94□□□□□ -0.18
ACTN1-208ENST00000553370 LTV1Q96GA3 475 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms